Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsKeNa_09g0002790 OGI:09013880 | 2/16 KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) Chr09:5250630-5257694
Gene Symbol -
DNA seq

ttttcaggatcgatcaaaaggaaaagaggtaggacagacaaaccagtaaggagacaaaaacaaaaggtatcgctttgtgtcttttttttcctaaacatttttttccacaacccagtatactaattagtttatgttgttctttgttaacaagacataattaaatctctatttttttttcttccagcgcacaaaacttgaatatgaccaagatcaatctggaagtgcagagtccccaaaaccaagaagcagactaaacatcacatacttttccaatttgattgaagggctcagcaacgagcaaagatcaattattgagaaatctgcttttggttcacttctaaactttcaaaggtgtgctataccactatcttttgtcaaatggatagctagtcacactgacgtcagctgctcagatatagttgtcaatgggagatccataccaatcaatccaaacaccaccaacttcatacttggtatcccaaatggaggtttagagatcaagcatgacaatgatgcaggaaaacatttttttcatcagcattatgggagcacaaaacccttaatttccttctttggcactaagttgcttagcgacaagggtgtgaacaaactatcagaagatgatgtcctacgttgtttcatggtggttgcactatcaacctttctttgccccaactcagacactcaccccagcccaaaatacctcgaacctctgattgatgtcaagtccagctcaaagtggaactggtcaaagtttgtttatgaatggcttatgacatacatagccaagttccaaaaggagagtaaatcaaaggaacaaacatcaaaaacccttggcggctgcggacacttacttgctgtatgcatctcttttttattacttaagtcattttttatacccataatatttctaaacattgacttattctttttcttttgtgtttgtttccttagattaattatcttgatttcaaagattttggaattagaaatattccaattggtccaccaccaagaatctctgtttggaaaggcggaatgataaaagagtattcaaaaatggatgaatgcaaaacaggagattttggaaagcgaccagtaagtaaaaacaacagaaaaattttattctgtgtcaatttgtttcctttttttcTtagatcatactctgtttattttctcagatcaaagcaatggagaaattaagttatgacgcaatatgttcaggggcccactgcattgagcaacagggcaacaatagcaacatgtcatgcggcgatgctctccagcaataccatagcaaatcatttaacccaagggtaaTttttttgctcctccaaatgctctgttttttaaaaaattttgttttcttagttttgtatatgtatgctccaatacactcactcctatttgtgtttttttaaatgcagctcattgatgacatttccacagcttgcaagtggttcacaagagaacattctgacacaacatatgaaaaaaatacacaactagctgccaaggttttggactgcgtctacatgtcaaaagcaagcctattcacacaaaaagatagcaccacaacaagggaagagaagagtggagaagagaagagcaagggggaagcaagcagggtggcagcaatgtagcacataatggtaatgccccacccctagaaaaaaaaaaccaaaacaacactgatgtctgttcccaactacccaagacaccacaaacaaaatcaactgcagagcacaaaacaaagtctaacatcaacaacaccagcactagcaaaggagcaccccctacaggtatatgttattattctgttagtttgtaaatttttctttttagacaaatagcacacaaacacaatagattcaaataatttgtgccaatgctaagataaatttccctaccaccaacaccagtatatccagtccaaaaaaaatgttcattctggactatagcattttttttacttggcatgtatactttctttaaaatctggaacaggcctaagcatagcctagttctgtgtcagtactcaatgttattagaaccataagttacccaggcccaaatatatgttttgtatttcacaaatatagaagatatattatgatgttcatactatagcattatgatgttcaTttttttttccagtttcttttctggtatgtttgtatcttttgtttagcacgcttaagcaatatcttgtttagcataatttcactctaaaacaatccttttccagataaaaaagcatccagtaaggactttgtttgtagtcagcaatcacacaactctgtggcatccaggactagagctaagagattacattcagcatcccctttgtcggttgtatcaattagcccatcgaaaaaaaattcttctgaccaaaagattcgcaaagcagtaaggaaacaggtaaaaacactatttacttttttatgacatatcatttatatacaaaaactgtttgcataatataagttcattttttttcagcccttgaaagcaacacaacctaccagtactcaaccagacaaggaagaatcaaacaaggatggttttttcgtggaacctatctgtactataccagccaaaaaggaggaggtaaaattcaaaattaggcaagagtcaaaatttcaaaccattttatactttttccccctatctttttcactacatgtctttctttttttttgcaaaacaggtgcagcccaccaaggatcttgaaagcaactctacagagtttgttatcgatatagagggtccatatgatgttgaagacataacaggtcacacaatggtaatatattttttttgttccatttttgtttcaacgattttaatcaatttatatcttttttgattatgctctattaatatttttaggataagacgaagttcattcttgtgaattattcaaactcttcagaagatcataaaagccaagatcctacacaagatgaatcagacaacattccacacaagagcacaaatgtatcaaacatatatcatgcattttaaagcactagtatttcttagtttttttttagtgtttgttttgtgagcaacaaactgctttttttctcactttctctttttttgtgtattatacgcctctattttttttatataatgtttgttttgcattgtacactggtccatatttttgtttttgtacatattatatatgtgtggatgaattttttagaagcagatagacattgtttttagaaaacacctctatacacaaaaacgatagactgctgtgcctatgtagagttcaaattttagagaacagatgaaacttagagcatagaggtgttttctaaatcacttttattttttgggtcatcttttaatttacagtgtcgtcttatcttatacacatcaagaacaaaatctaaactccacatgtaataaaattttggtttgtcacttttttttttctaccagtactgtttactaatttgttttattgttttttattttaatcctgtaaatttttgcagcattgattgactgataaactaacatttttttttgtatctgtgttgcactttaatgtacaaaaaatgtaccttattttttttatctatcctgatttgtaaccttttaatttcttctcatgtaactcacacacagcaacccaaatttgaatgcttacatcattttgatgataaatcaaaaataaacaaaagtgccagccttggacacttcttgtcccaaacaacatcaggcacaaacatcatggacattgaacacagcagcatgcaggtgacgcagggggagaggtacatgcacacacccaaaacatgcataaacaataaagatggagttcaacatttatcaggtacaactttgaccctttttctctatacacataaaattattttttttgtactataattaatttattttatagacgtaagtagtaacaatcagggggggaatcaaaatgtctagaaaaaataaaaagattatctagccaaatttatattttggacaatcatgttagatgttttttcttgttacttttttttattttttatgtggatgattttttgttagcaaacttcactgcaaacatggggaataggaggcttgagggacaacactgtgatgaaaacgagtaccaagatgactttacagaattcttatatgaagaggaaccatcagataacatcgatatggttgaacaacgtgcggtaataacctctgattttttttacttgtctttttttttcaaacatcaacccTtttttgggtatgctccttattggacaatttcatccttgcagcaaacacaaataaacaatgagcaaagtagccctcaaacaccactgcacataaacattgcttctgcaaggacacctgctacaaaacaagtaatacaaattgtaagtactttcctctcaattttttgcttaatttttttcaatcagcatgacataaaactatgtcttatactcttaaacattattacaataaattctgttttttcccatttttcacttgttttattttttaatgcagagttcacaatcatcacctgatataggtatgaattctccaagaatagcacaaatgagggaaccaaatcaacatgctcaaacagaagaaagacaatattcaatgacaagaatcatcgactcactaaatgcttctggcaactgttctggtaccagacacaatctttatcgccctaaaagaattgtacatccaagtaaatacaagagctcaccatatgacaactacacacggcaccaaacaatctcggcagctgaactcaatcactacaacaacatactcagcattggtgagacgcaacaatataaatagtaagtgtcacaaaacaacattataatggttgcttttttacattttgctttttttagattatgtttaagagtataagacatagTttttttttgtcacatgttctgaattcttctgtgctgattcaaatgagttagcagcaagcaaatacttggctcctgttgctttttgagaaattatagctgttgattcacctgctgcttttcttctgttttgtgtttctgttccttgttaattgttgcacaatcgtaaatccgtttgagttggcgttgtttcttaacttgggaacaggggattgcacagctacaaaattgttaacctgtttgaattggcgtattttttgaattttgggacaggggatcagtggatttttgaatttttgaattttgggaataaggtactgcacagtttcagtcgacatgtacatttaaaatctcatactatggcaaactgaagataattaggcatgaattcagtctaatgcgtgtcagcagtagcaaaaccaaggtcactttttgggtgcagaatacatgtttatatttcagaaatgtagatatagtttcaggttgtaaaaatattttgcacatatgcatagttgcttatattttctgatatgtttgttcagatttgtttggtggcatgcagttccatttttttacttttgtttttttaggtttcagtttgttttgaaacataggtgcagtattttttaagtgcagcggtgtatttgggagatttagcttaaatggggttttgcagcggtgtatttgggagatttagcttaaatggggtttttttatggattggaaaaaaaattctttgcaaagcgtgctgtgttttctgtttttgatatatacttagataaatgcctctgttcggtggatctaaaatgtgtgggactgaaggtttttgatggtcagttctaaattatgagaagcaaaTtttttttgttttcaacatacgagatattaatctactgcatgtgtgttcttaatccccttcataggtaggccaacagtcactattaattatcatctacacagagcgttaattttttggttgcactatgcaaaataagttcaattatattccagttacatataacttacaacctagttacaacccagtttaattagattttatattttgtatgatcatcctgaattggtaggcgcagctgaaatttgcattgacaaccaaatgaaagtttatcactttttgtttaacacaacaaggcatgcaaagaagggtgaaaaatctattacattacaaactatttttgcattttttcataatatgcataacaaacagcttgtgctgactattccaattttctgaaatttaagtaatctgaacttttttgttttgtactctttctgccttaagagtactaagcattactaaaagcatttatcttctttatttgtggtacagtaaatttgcagttctaatggacaatgtaaaagtcacatggtcatcattgtctaaatctttatcgccaaggggagtggtggatgcatatgtcctcaacgcttatgccaagaagattgccaacgaccagaataacaaagaaaatgaatacaggaatttttacttcttccatagaactagtgtatgtgtttttttcatactttctatcacatacattttttttctcatctccagttgtatcacttcaaaattctctaccttttttttcacaggtttatttcttgaagaattgggaaggtgctggaaaagaggaagactatgaaaattgtgcaagacaagcttttacatttgccaggaacaagaaacctctgcactactatgacttggtttgtacatttttctttttcaaacataaaattgatccatttttttgtgtgtgtgattaacataaagtgatgcccctttggtttttatgttatgtagcttattttcccatgtctgtatgacaatcattggtttgtgtttactgtggacatcaaggggcatcactttatcttcctggactccatttatgatgaaaatagcaaatatcataagaaaattcaagggctattggtgagctatacaaattttgttcttttttttccatacaatttttttatagacgcatccactgattattttctggttttttttcatgctcctcttgtttatacacagataccaggattcattgcaatgtgggaagaattctcatatgtggagaaagactttagtaaatttgatatctaa

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CDS seq

atggtggttgcactatcaacctttctttgccccaactcagacactcaccccagcccaaaatacctcgaacctctgattgatgtcaagtccagctcaaagtggaactggtcaaagtttgtttatgaatggcttatgacatacatagccaagttccaaaaggagagtaaatcaaaggaacaaacatcaaaaacccttggcggctgcggacacttacttgctattaattatcttgatttcaaagattttggaattagaaatattccaattggtccaccaccaagaatctctgtttggaaaggcggaatgataaaagagtattcaaaaatggatgaatgcaaaacaggagattttggaaagcgaccaatcaaagcaatggagaaattaagttatgacgcaatatgttcaggggcccactgcattgagcaacagggcaacaatagcaacatgtcatgcggcgatgctctccagcaataccatagcaaatcatttaacccaaggctcattgatgacatttccacagcttgcaagtggttcacaagagaacattctgacacaacatatgaaaaaaatacacaactagctgccaaggttttggactgcgtctacatgtcaaaagcaagcctattcacacaaaaagatagcaccacaacaagggaagagaagagtggagaagagaagagcaagggggaagcaagcagggtggcagcaattttcttttctgataaaaaagcatccagtaaggactttgtttgtagtcagcaatcacacaactctgtggcatccaggactagagctaagagattacattcagcatcccctttgtcggttgtatcaattagcccatcgaaaaaaaattcttctgaccaaaagattcgcaaagcagtaaggaaacagcccttgaaagcaacacaacctaccagtactcaaccagacaaggaagaatcaaacaaggatggttttttcgtggaacctatctgtactataccagccaaaaaggaggaggtgcagcccaccaaggatcttgaaagcaactctacagagtttgttatcgatatagagggtccatatgatgttgaagacataacaggtcacacaatgcaacccaaatttgaatgcttacatcattttgatgataaatcaaaaataaacaaaagtgccagccttggacacttcttgtcccaaacaacatcaggcacaaacatcatggacattgaacacagcagcatgcaggtgacgcagggggagaggtacatgcacacacccaaaacatgcataaacaataaagatggagttcaacatttatcagcaaacttcactgcaaacatggggaataggaggcttgagggacaacactgtgatgaaaacgagtaccaagatgactttacagaattcttatatgaagaggaaccatcagataacatcgatatggttgaacaacgtgcgcaaacacaaataaacaatgagcaaagtagccctcaaacaccactgcacataaacattgcttctgcaaggacacctgctacaaaacaagtaatacaaattagttcacaatcatcacctgatataggtatgaattctccaagaatagcacaaatgagggaaccaaatcaacatgctcaaacagaagaaagacaatattcaatgacaagaatcatcgactcactaaatgcttctggcaactgttctggtaccagacacaatctttatcgccctaaaagaattgtacatccaagtaaatacaagagctcaccatatgacaactacacacggcaccaaacaatctcggcagctgaactcaatcactacaacaacatactcagcattggtgagacgcaacaatataaatataaatttgcagttctaatggacaatgtaaaagtcacatggtcatcattgtctaaatctttatcgccaaggggagtggtggatgcatatgtcctcaacgcttatgccaagaagattgccaacgaccagaataacaaagaaaatgaatacaggaatttttacttcttccatagaactagtgtttatttcttgaagaattgggaaggtgctggaaaagaggaagactatgaaaattgtgcaagacaagcttttacatttgccaggaacaagaaacctctgcactactatgacttgcttattttcccatgtctgtatgacaatcattggtttgtgtttactgtggacatcaaggggcatcactttatcttcctggactccatttatgatgaaaatagcaaatatcataagaaaattcaagggctattgataccaggattcattgcaatgtgggaagaattctcatatgtggagaaagactttagtaaatttgatatctaa

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Protein seq

MVVALSTFLCPNSDTHPSPKYLEPLIDVKSSSKWNWSKFVYEWLMTYIAKFQKESKSKEQTSKTLGGCGHLLAINYLDFKDFGIRNIPIGPPPRISVWKGGMIKEYSKMDECKTGDFGKRPIKAMEKLSYDAICSGAHCIEQQGNNSNMSCGDALQQYHSKSFNPRLIDDISTACKWFTREHSDTTYEKNTQLAAKVLDCVYMSKASLFTQKDSTTTREEKSGEEKSKGEASRVAAIFFSDKKASSKDFVCSQQSHNSVASRTRAKRLHSASPLSVVSISPSKKNSSDQKIRKAVRKQPLKATQPTSTQPDKEESNKDGFFVEPICTIPAKKEEVQPTKDLESNSTEFVIDIEGPYDVEDITGHTMQPKFECLHHFDDKSKINKSASLGHFLSQTTSGTNIMDIEHSSMQVTQGERYMHTPKTCINNKDGVQHLSANFTANMGNRRLEGQHCDENEYQDDFTEFLYEEEPSDNIDMVEQRAQTQINNEQSSPQTPLHINIASARTPATKQVIQISSQSSPDIGMNSPRIAQMREPNQHAQTEERQYSMTRIIDSLNASGNCSGTRHNLYRPKRIVHPSKYKSSPYDNYTRHQTISAAELNHYNNILSIGETQQYKYKFAVLMDNVKVTWSSLSKSLSPRGVVDAYVLNAYAKKIANDQNNKENEYRNFYFFHRTSVYFLKNWEGAGKEEDYENCARQAFTFARNKKPLHYYDLLIFPCLYDNHWFVFTVDIKGHHFIFLDSIYDENSKYHKKIQGLLIPGFIAMWEEFSYVEKDFSKFDI

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsKeNa_09g0002790 OsKeNa_09g0002790.01 Chr09 5250630 5257694 + NAM
CDS seq

atggtggttgcactatcaacctttctttgccccaactcagacactcaccccagcccaaaatacctcgaacctctgattgatgtcaagtccagctcaaagtggaactggtcaaagtttgtttatgaatggcttatgacatacatagccaagttccaaaaggagagtaaatcaaaggaacaaacatcaaaaacccttggcggctgcggacacttacttgctattaattatcttgatttcaaagattttggaattagaaatattccaattggtccaccaccaagaatctctgtttggaaaggcggaatgataaaagagtattcaaaaatggatgaatgcaaaacaggagattttggaaagcgaccaatcaaagcaatggagaaattaagttatgacgcaatatgttcaggggcccactgcattgagcaacagggcaacaatagcaacatgtcatgcggcgatgctctccagcaataccatagcaaatcatttaacccaaggctcattgatgacatttccacagcttgcaagtggttcacaagagaacattctgacacaacatatgaaaaaaatacacaactagctgccaaggttttggactgcgtctacatgtcaaaagcaagcctattcacacaaaaagatagcaccacaacaagggaagagaagagtggagaagagaagagcaagggggaagcaagcagggtggcagcaattttcttttctgataaaaaagcatccagtaaggactttgtttgtagtcagcaatcacacaactctgtggcatccaggactagagctaagagattacattcagcatcccctttgtcggttgtatcaattagcccatcgaaaaaaaattcttctgaccaaaagattcgcaaagcagtaaggaaacagcccttgaaagcaacacaacctaccagtactcaaccagacaaggaagaatcaaacaaggatggttttttcgtggaacctatctgtactataccagccaaaaaggaggaggtgcagcccaccaaggatcttgaaagcaactctacagagtttgttatcgatatagagggtccatatgatgttgaagacataacaggtcacacaatgcaacccaaatttgaatgcttacatcattttgatgataaatcaaaaataaacaaaagtgccagccttggacacttcttgtcccaaacaacatcaggcacaaacatcatggacattgaacacagcagcatgcaggtgacgcagggggagaggtacatgcacacacccaaaacatgcataaacaataaagatggagttcaacatttatcagcaaacttcactgcaaacatggggaataggaggcttgagggacaacactgtgatgaaaacgagtaccaagatgactttacagaattcttatatgaagaggaaccatcagataacatcgatatggttgaacaacgtgcgcaaacacaaataaacaatgagcaaagtagccctcaaacaccactgcacataaacattgcttctgcaaggacacctgctacaaaacaagtaatacaaattagttcacaatcatcacctgatataggtatgaattctccaagaatagcacaaatgagggaaccaaatcaacatgctcaaacagaagaaagacaatattcaatgacaagaatcatcgactcactaaatgcttctggcaactgttctggtaccagacacaatctttatcgccctaaaagaattgtacatccaagtaaatacaagagctcaccatatgacaactacacacggcaccaaacaatctcggcagctgaactcaatcactacaacaacatactcagcattggtgagacgcaacaatataaatataaatttgcagttctaatggacaatgtaaaagtcacatggtcatcattgtctaaatctttatcgccaaggggagtggtggatgcatatgtcctcaacgcttatgccaagaagattgccaacgaccagaataacaaagaaaatgaatacaggaatttttacttcttccatagaactagtgtttatttcttgaagaattgggaaggtgctggaaaagaggaagactatgaaaattgtgcaagacaagcttttacatttgccaggaacaagaaacctctgcactactatgacttgcttattttcccatgtctgtatgacaatcattggtttgtgtttactgtggacatcaaggggcatcactttatcttcctggactccatttatgatgaaaatagcaaatatcataagaaaattcaagggctattgataccaggattcattgcaatgtgggaagaattctcatatgtggagaaagactttagtaaatttgatatctaa

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Protein seq

MVVALSTFLCPNSDTHPSPKYLEPLIDVKSSSKWNWSKFVYEWLMTYIAKFQKESKSKEQTSKTLGGCGHLLAINYLDFKDFGIRNIPIGPPPRISVWKGGMIKEYSKMDECKTGDFGKRPIKAMEKLSYDAICSGAHCIEQQGNNSNMSCGDALQQYHSKSFNPRLIDDISTACKWFTREHSDTTYEKNTQLAAKVLDCVYMSKASLFTQKDSTTTREEKSGEEKSKGEASRVAAIFFSDKKASSKDFVCSQQSHNSVASRTRAKRLHSASPLSVVSISPSKKNSSDQKIRKAVRKQPLKATQPTSTQPDKEESNKDGFFVEPICTIPAKKEEVQPTKDLESNSTEFVIDIEGPYDVEDITGHTMQPKFECLHHFDDKSKINKSASLGHFLSQTTSGTNIMDIEHSSMQVTQGERYMHTPKTCINNKDGVQHLSANFTANMGNRRLEGQHCDENEYQDDFTEFLYEEEPSDNIDMVEQRAQTQINNEQSSPQTPLHINIASARTPATKQVIQISSQSSPDIGMNSPRIAQMREPNQHAQTEERQYSMTRIIDSLNASGNCSGTRHNLYRPKRIVHPSKYKSSPYDNYTRHQTISAAELNHYNNILSIGETQQYKYKFAVLMDNVKVTWSSLSKSLSPRGVVDAYVLNAYAKKIANDQNNKENEYRNFYFFHRTSVYFLKNWEGAGKEEDYENCARQAFTFARNKKPLHYYDLLIFPCLYDNHWFVFTVDIKGHHFIFLDSIYDENSKYHKKIQGLLIPGFIAMWEEFSYVEKDFSKFDI

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os09g08450 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_09g0002780 RBH 0.0 0.0 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_09g0002660 SBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_09g0002680 SBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_09g0002550 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_09g0002740 SBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_09G0075300 SBH 0 0 0.0041265
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_09g0002640 SBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_09G0077700 SBH 0 0 0.0079505
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_09g0002670 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_09g0002700 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_09g0002730 SBH 0.000000 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_09g0002610 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_09g0002730 SBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_09G002690 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_09g0002720 SBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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