Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_08g0022490 | OGI:08074300 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr08:27137262-27141787 | ||||||||
| Gene Symbol | OsDjC65 | ||||||||||
| DNA seq | ccacgcgctttgccggaaagccccaaaagcccgaccaccactgccgccgcgccgcctcctcctcctccgcctccgccgccgccgccgcccgccggccatctccgtcgatccaccgtccggcgagcagacagcagcccggcagatctgcccccaccacgggatcgaatcggcggggggaaccgaatcggggagcgcgggaggcggggagcttagtttgagctcggtcggcggcggcggcggcggccatggtgaaggagacggggtactacgacgtgctaggggtgagcccgaccgccaccgagtccgagatcaagaaggcgtattacatgaaggtaagtaggattcgtcgacttgtcgtcgtcgtcgtcgtcgcttgattttggtctgatttgtgtttgctggtggtggcgcaggcgcggcaggtccatccggataagaaccccaatgacccgaaagccgcggagaatttccaggtaggtgttccgccattgttctactactggcaacttatacccttataatcaactcggtgcaagcagctcacagggtagtgtagaaccctcgattgaatcagattagatgcttatttagctggacagctgatgcgcaaagtccgagatgttggacagattagatgcttattagctggatagctgatgcgcaaagtcactatcccagcacgctgttctctgcggattggtttcgtaagcagtcgtgtttttgtttgtttggctagttaatcagtaatcactttaagtttaaggttatacagctaaatgcttattagtaaccaccattccaccagtctctattactctgaaaacataaaatgtgtctttgccttttttacgtttgagatttggttaatggtgattagctatatatgctaaactaagtgtttgcctatctaaactgctctgtgaaactcaacatcaggaagtttaatatctaacatttggaatcagaattatattgctgagatatatagtaagttctagttaggccattcaacttaactatgcagatcgaccattccacaaatgaaatctgtgtaataacatgccagttaatgatcgcgaggttatgatatgatatctctaatctacttaaaaaggcagtcgtccgtccgcactcccctccctccaccacgcacagtgagagaaaaagaggcatgcagcgcatgccccacttgccccacttgctccacatcctcgcctccccaaaaaactggatttatttaacagctgacagaaaacatgtaaaaacaattaaaaaaattggctataaacagaaacagggcacaattaatattttataggtccgttgcaacacacgggcatttttactagtattagtaacatatcacattcttctctcctccctaactccaaagcagcaatgaatatatttgaagctgttactgcatagccattgtagtattatatggcattggctttattagaaagggtgctttttttttttttgcatattttcctattccgtactattgttacttataggaattctcattgcaggcactaggagaggcataccaagttcttagtgaccctacgcagcgccaagcttatgacgcacatgggaaatctggcatctcaacgtatgtgctgattttctcaaagaaattatatgatgctcttgcaaaatattgaaaagctttataggattttcatggttattaatttgccatttgtggcaaagcaacgccagtactatagttgaacttctttttttttcttccattcgagagatgcagatttttgtgggatacttagtgattacctcttttttgttttgaataataataccagacaacaatgttctagctcatttggttttgaaattctatagggaagggataattgatccagcagcaatttttgcaatgctatttggtagtgagttgtttgaagattatattggtcaactggctatggcatcaatggcttcacttgataatttcggtgaagatgaacatattgacacaaggaggttgcacgagagaatgcaggcatgctcctttagctggtttattttatatcatcttccatgctcattgaataacatgaatacagtcaatggacattaatgtatgattcttttggcagctttcttttcatatttgttgcatttttcatattcttctgccacaatattctgctgagtagtatacttcaattcaggctgttcaaaaggaaagggaagagaaacttgcagagacactgaaaaaccgactgcacatttacgttcaaggaaataaagaggaatttgtccagcttgctcaagctgaggtgaccagacttagcaatgcaggtttttgtcaatactacccaccctcttcctcaactctgacttccccccttgctctcttcctttcctgcttaagtgcttattgctgcaaggacttgctcaacacttatcttagagaagttggcatatgatatttaaggaactgtacctatttatcacatgattgaatagataactgcataataagatatcttgacaagcatatctcatgagatggcatctagaatcatccacttcagctgaaacagatccaaaaattagtatgctattctttggctacacatacttcttgctgagcttattaattgaagtgaatatacaagcaccataagctcattcttttttttttttaattatgcgcatgttgtaaaaggatgtgaatggcctatatgctattcctgcaagtatatgatgatgttagctcgatggcatattaccaattttccctatattaaagtatatttgccaagttcgtaaatagaacccattaaatgttcgttttggtatattttgttgtttttgctctgttgagtgctcattgtgacttcggttggtctttaagctacattatgtgaactttctcattctgtttggtcatgttttgcttcttgtgcagcatatggcactgttatgttaaacactatcggctatgtatattcgagacaagctgcaaaagaacttgggaagaaagcaatattcttgggtgttccatttgtagctgagtggttcagagacaaaggccatttcatcaaatcccaagtaacagctgcagcaggtaacataactcatcaatatatttaacttgaaagtatatgatacagctaatgtcatctattgtgctagcattatattaatcataaagaatttggttgtctcatggttctgtaggtgcaatagctttgatgcagttgcaagaagacttgaagaagtatcttagtgctgaaggccattacacagaggaggaactagaaatgttcatgcaaaaccacaaaaaggttatggttgattccttgtggaagcttaacgttgctgacatagaagccaccctatcacgagtctgtcaaatggtctgtcccagcttacccatcaccgttttactcatggttattttttaacataactagtgtgatagtgaattttgaacattgtatggatgccaggtgcttcaagatggaagcgtcaggagggaggaactgcgtgctcgtgctaaaggactgaaaacattaggcaaaattttccaggtatagcttgttcatttgttcattaaagttttggtgatgctgttgacattttcattatatgacttgtatttacccttcacttagcgggttaagctcaacaatgatgagggggaagcatcggatatgaggaatatagataacatggatgacaatgacgggagctcccccgatacatcaccaagaagggaaccaccatacaatcctatccctaaccctcctcatgctcaggtagcagctcattatgattttttacttctgtcgaatttctcaagatggccatttgccactgtccattatcatggtgccttattgattgactcattgagagattgaacttggagcacagtaattaatctataagaggcttaagagctcttatatagccttctctcatgacatgctaaaatacttttttctcttgttctagagcccatatgtggaggccccacagtttggaggaacctattacccattcaatttcccaatgccaacagctccacctggtgcgcagagggatccaattccatgacaccatttaagcttgcatgtgctgttgttctgtgcaatattgctggtgaaatactagatcatttgtgtgatgcatcatttgtacctgtagtagagaacggaggtttagctatccttcgcaccatttattcggttgtacaatcagagactggtcaggtagcagccgtgtactgttgtgtacagttgttaacgctcgtgttgaggcagtagtaggtcagcattggtgtacatggtttggtgttaatctgcggcctcgttccgtttagcttgacgtgcatcttctatggaaaatgaagctgagaaataaaatcatgtttatagttttgggtgtatttcatggaaatcattgtgaatgagtttgttggcggcaatgtcgaataaccataatgttttggaaatatcatttggatgagaaactgttggtctttc
More
|
||||||||||
| CDS seq | atgctatttggtagtgagttgtttgaagattatattggtcaactggctatggcatcaatggcttcacttgataatttcggtgaagatgaacatattgacacaaggaggttgcacgagagaatgcaggctgttcaaaaggaaagggaagagaaacttgcagagacactgaaaaaccgactgcacatttacgttcaaggaaataaagaggaatttgtccagcttgctcaagctgaggtgaccagacttagcaatgcagcatatggcactgttatgttaaacactatcggctatgtatattcgagacaagctgcaaaagaacttgggaagaaagcaatattcttgggtgttccatttgtagctgagtggttcagagacaaaggccatttcatcaaatcccaagtaacagctgcagcaggtgcaatagctttgatgcagttgcaagaagacttgaagaagtatcttagtgctgaaggccattacacagaggaggaactagaaatgttcatgcaaaaccacaaaaaggttatggttgattccttgtggaagcttaacgttgctgacatagaagccaccctatcacgagtctgtcaaatggtgcttcaagatggaagcgtcaggagggaggaactgcgtgctcgtgctaaaggactgaaaacattaggcaaaattttccagcgggttaagctcaacaatgatgagggggaagcatcggatatgaggaatatagataacatggatgacaatgacgggagctcccccgatacatcaccaagaagggaaccaccatacaatcctatccctaaccctcctcatgctcagagcccatatgtggaggccccacagtttggaggaacctattacccattcaatttcccaatgccaacagctccacctggtgcgcagagggatccaattcca
More
|
||||||||||
| Protein seq | MLFGSELFEDYIGQLAMASMASLDNFGEDEHIDTRRLHERMQAVQKEREEKLAETLKNRLHIYVQGNKEEFVQLAQAEVTRLSNAAYGTVMLNTIGYVYSRQAAKELGKKAIFLGVPFVAEWFRDKGHFIKSQVTAAAGAIALMQLQEDLKKYLSAEGHYTEEELEMFMQNHKKVMVDSLWKLNVADIEATLSRVCQMVLQDGSVRREELRARAKGLKTLGKIFQRVKLNNDEGEASDMRNIDNMDDNDGSSPDTSPRREPPYNPIPNPPHAQSPYVEAPQFGGTYYPFNFPMPTAPPGAQRDPIP |
||||||||||
| Function | Chaperone protein dnaJ 10 [UniProtKB/Swiss-Prot:Q8GYX8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_08g0022490 | OsKeNa_08g0022490.01 | Chr08 | 27137456 | 27141787 | + | NAM | ||
| CDS seq | atgctatttggtagtgagttgtttgaagattatattggtcaactggctatggcatcaatggcttcacttgataatttcggtgaagatgaacatattgacacaaggaggttgcacgagagaatgcaggctgttcaaaaggaaagggaagagaaacttgcagagacactgaaaaaccgactgcacatttacgttcaaggaaataaagaggaatttgtccagcttgctcaagctgaggtgaccagacttagcaatgcagcatatggcactgttatgttaaacactatcggctatgtatattcgagacaagctgcaaaagaacttgggaagaaagcaatattcttgggtgttccatttgtagctgagtggttcagagacaaaggccatttcatcaaatcccaagtaacagctgcagcaggtgcaatagctttgatgcagttgcaagaagacttgaagaagtatcttagtgctgaaggccattacacagaggaggaactagaaatgttcatgcaaaaccacaaaaaggttatggttgattccttgtggaagcttaacgttgctgacatagaagccaccctatcacgagtctgtcaaatggtgcttcaagatggaagcgtcaggagggaggaactgcgtgctcgtgctaaaggactgaaaacattaggcaaaattttccagcgggttaagctcaacaatgatgagggggaagcatcggatatgaggaatatagataacatggatgacaatgacgggagctcccccgatacatcaccaagaagggaaccaccatacaatcctatccctaaccctcctcatgctcagagcccatatgtggaggccccacagtttggaggaacctattacccattcaatttcccaatgccaacagctccacctggtgcgcagagggatccaattcca
More
|
|||||||
| Protein seq | MLFGSELFEDYIGQLAMASMASLDNFGEDEHIDTRRLHERMQAVQKEREEKLAETLKNRLHIYVQGNKEEFVQLAQAEVTRLSNAAYGTVMLNTIGYVYSRQAAKELGKKAIFLGVPFVAEWFRDKGHFIKSQVTAAAGAIALMQLQEDLKKYLSAEGHYTEEELEMFMQNHKKVMVDSLWKLNVADIEATLSRVCQMVLQDGSVRREELRARAKGLKTLGKIFQRVKLNNDEGEASDMRNIDNMDDNDGSSPDTSPRREPPYNPIPNPPHAQSPYVEAPQFGGTYYPFNFPMPTAPPGAQRDPIP
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_08g0022490 | OsKeNa_08g0022490.02 | Chr08 | 27137262 | 27141689 | + | IsoSeq | ||
| CDS seq | cacgcgctttgccggaaagccccaaaagcccgaccaccactgccgccgcgccgcctcctcctcctccgcctccgccgccgccgccgcccgccggccatctccgtcgatccaccgtccggcgagcagacagcagcccggcagatctgcccccaccacgggatcgaatcggcggggggaaccgaatcggggagcgcgggaggcggggagcttagtttgagctcggtcggcggcggcggcggcggccatggtgaaggagacggggtactacgacgtgctaggggtgagcccgaccgccaccgagtccgagatcaagaaggcgtattacatgaaggcgcggcaggtccatcc
More
|
|||||||
| Protein seq | HALCRKAPKARPPLPPRRLLLLRLRRRRRPPAISVDPPSGEQTAARQICPHHGIESAGGTESGSAGGGELSLSSVGGGGGGHGEGDGVLRRARGEPDRHRVRDQEGVLHEGAAGPS |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.533419 | 5.956846 | 2.399698 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0522600 | RBH | 2.931017 | 2.344315 | 7.427617 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g41110 | RBH | 1.866333 | 1.477965 | 1.791571 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0522600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0022610 | RBH | 2.499221 | 11.705714 | 4.958225 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0015140 | RBH | 0.123787 | 7.117600 | 1.066693 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0022390 | RBH | 2.852435 | 15.049871 | 7.510135 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0022530 | RBH | 0.310797 | 0.613235 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0022400 | RBH | 10.563846 | 48.923615 | 37.336788 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0414200 | RBH | 13.386705 | 22.944211 | 26.523731 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0022290 | RBH | 0.664387 | 1.037046 | 1.850970 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0435900 | RBH | 16.0894655 | 25.0653695 | 22.6479235 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0021650 | RBH | 0.574647 | 0.200856 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0021950 | RBH | 1.103002 | 18.564018 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0021800 | RBH | 0.0 | 8.530234 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0022600 | RBH | 1.092566 | 1.226856 | 3.114099 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0021970 | RBH | 0.719287 | 7.891850 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G022140 | RBH | 0.966801 | 5.180186 | 3.911919 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0022290 | RBH | 1.027280 | 17.538757 | 11.065587 |
