Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_08g0010560 | OGI:08033750 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr08:12339581-12346654 | ||||||||
| Gene Symbol | YR36 | ||||||||||
| DNA seq | gacggcgccacacccatcttctctacttctctcttgatccctagctgtagctgtagctggcagatggacaaggcggcggttgttccacttccaatcaccggaggagtcaacgacgatcgtactgctgcgctgcagcagtgggcttccaccgtcggcttcggaggcgaggtggggcgcctcgtcgaagcccaccgacgcctcggctcggtgctcgcggagacgcaggggaaggagatccggaacaaggagctccagcggcgcctcagggaggcctcgcatgatgctgcccgcgcccgtgacctcctcggcgagctcgagtactaccgcatccgtgaggaggtggagcgcgacgaccacgataaggtcagcgcaggttttgttttctggatttttttttattcacctgaggtcctggttgttttgttccccaatcctcctatgtacttgtactacaaatcgaaggcaaattactgcatatttcaaccatcacaatcccactaaattttggcaatttcagagctttcaactgttaaaatagcaacaaatttgataattgctcaagtcaaacatcgccttaccaaaatttttgcgggaatgccaaaatttggctttagtgaagtttgataagatttactttcgcaatacaaaccaaacatgcccatggtaccttcgtgcacgaagcaggctgtggcatgttcgtgggctcgatatgctttctttcatttctcacccaatcagaatgcagtatccatactttggttttgatgtgactagtgaaaaatgttatgccggttacggtggattacaaacctatgccatgaatccatgatgaatgatcataagtacatgcctctttttgcgataatggaaattaatccagcctctgcatcaaaagatgcatctgaccctagtttattacaggtttgcaacatgagttgctaaacataactactgactatatgagaatatgaaaatcaaacacaaatcctactactaaatctccaaccatgtgtagagttttgatgacgaccatctcaattttgctacatgccatgatgatatctgatttgtcatcttcattttgcagtagataacagtaatcataatggcacataatcttcgataacgcctcctcatccttaaaaaggcccttcctatatttacctcgatattttgtatcaaaaaatagtcagatttttcaacatgcatatgtatgaagtaaaccacaatcaatcttccagccaacagcacacctgcttgcaatcaaaatggaacaaggcaaaaagatttgagctcacaggcctggaaccaaatgagaaaatggctggttggaaaacacatgttcacacaaaattagcaaaactgtcctaagaatgcactaactcaccaaattggttcactagattgctcagtgtttagattcttgtactaaatacccatttgcaaattgcttttgtgatgtactccctccgtttcacaatgtaagtcactctagcatttcccacgttcatattgatattaatgaatctagatagatatatatgtctagattcattaacatcaatatgaagtgggaaatgctagaatgacttacattttgaaacggaggaaatattggttagtcctcaagctcttgcactaaaccgtaagccacctgccatacttgaggcacaatttactcaagtaaatttgaaacaaattttaatgacagtgtaaaacactgatttactttttagatactagaactaatatcctggcctgtgcctggagatacacacagctaaaacactgattaactaattggggaacttataattttgttgagaatgatactgcaggggaggcccttgcagttaaaactattattaaaacaaataagatacagaattacaacagttcaagccagtaatctgtatctttttaccagtaataggaattggtatttatccatattttgttctctcgctatccgtttacttcaacgactggatttgcaaagtgctgtcttgtgcaaatgctctgtttcatacattatgatataataatgtatgtattcaatgcagacaaatttctattatatgtgaaatacttgacactactttgtagtggactcttcaactgtgacgtgtcaaaccaaaatataaatacaacttcttttagtgacatgctttacagaattatcgtttcttgtgggtacagagttatactaaattatgatgcatagcaacttttgatagttgtttaaatccacttttgcccctttttttcagctattgcatgacaatgccaatggaaatttgcttctctccatgcctcaaagggatgttgagttctttaacaatgatgcagcaaaagatgacaaagacaccacagaaagttctcttagcaacacagattcatctgcatctgctcttcaggttactacgtacattgctagtagcagtagtccagtaccctatctggagactcttaacaagtgcatctcgaatgagataagtaaatacactgaaaaatgctacgggatagccaaacaggtgagtgaagctcttgagcttgaaagtctggattacctttacgcgcacaaataccagagaacaagaacagatcatcgggagacatcaccatgccaaagtgaacccaaagttcatgggagggaccaacagcgtgacttgataataagcaagttaacaagtgaggaatgtgctaggaagaaactctctatccttgccatcatcggtgatggaggtattgggaaaactactctggctaagctagtcttcaacaactcaacagtgtcaaagcattttgacgttctgttatgggtttatgtatctgttcacttcgatcaaaataagattatgcaggaaatgttggactccttttgcggggatgagcatgatgaaatcaagaaatcgaaggagcttcaactccaagacaaacttgactacttattgaagtcaaaacgagtgctacttgttatggatgacatgtgggaggatagcacaaaggaaaaatgggatgagctgttaaatccattgcttaaaaacgatgttatggggaacagtgttcttgtcacaactcgtaaaccatctgtggcaacaatgatagaagcagcagatcacatcaacctggatggtttgaaaaaagatgacttttggtgtttgttcaaggaatgtgtatttggacatgagaactataaaggagaaccaagactggaaaaaattgggcagcagatagttgacaagttaaagggcaatcctttagcagcaaagactgtaagcaaagtattgagaaggagctttgacgttgattactggaggagaattctgcataccagtgaatggaagtacaaaaatgatgagaacgatatcatgccggccttgatgatcagctacaaatatcttccagctcaccttcaaagttgtttctcgtactgtgctgtgTtTCCCAAAGTATCATAGGTATGAGAAAGAGCGTCTGATCAATATGTGGATAGCGCAAGATTTGCTATGTTCCGCTGATATTCACACACGACCTGAGGACATTGGAAATGAATACTTTGATGATCTACTTGATtggggatttttcgaaaaacagtttgagcactcaaccttactcatcatgcatgatctaattcatgatctggcacagaaggtttcatctgacgaaagctttaccatagagggcaatgagcctaggaatgcaccgccatgtgttcgtcatgtcagtgtaataacagagtgggagtacaaaacaaaattgaatggcactgtgtatcctaatgattctttcctccaagagttctctaattccttccgtgagttgcaacaaaggagcttaagcacattgatgctgtttgggccacatgacttggattttgcagacacgtttcggcaagaactcaatgaggtaaggtcaatccgtgtgttgaaactggagatggtcttctttgacttggattcattgataggcaacatctcagcatttgtcaatcttcgctatctagaactgggctgcttctacaagggccccaggctggagctaccagaagctatatgcaggctgtatcaccttaaagtcctggatataaagaagaactggggtcctagcacatctttgccaagagaaatgagcaagcttgttaacttgcggcattttattgctgaaaaggagttacatgcaaaaatagctggcatcggaaagatggtttccctgcaggggctaaaggcatttgatgtcaaaaaggaccatgagttcagcatatcacagctgagagggctgaatcagctaaggggatcaataagcatttctagtctttacaatgcagggcatgaagaggctagccaagcaaggctctgtgacaaggataacctaacttgtttgcacctgtcatggctgactttatctaggaaccatgttgcacggcgtactcttcctatcctggaggatcttaaaccacattctggccttagaaatctgcaagttgttggatacaggcattctttaccatcatggctttgcagcactgtccatctcacctctttgcggtcactccacctggatagatgcatacgttggcaaacaattccacatccccagcagttgccttttctccaggagctgcatttgattcaactgcctcgtgtttacaaaatagagattggtcctctgaaggtccttgaaatacgctggttgcaaaatctgaggcagtgcatacttttagataaggaacagtcatatgctaccctacagatccttgaagtggagggatgccccaaattggatgaatttctattgcagattttcatgtcttcgggtgtacaaagcacaaaccaatttcttggtattcacaggcttcagatacacaatgacttccttcgtgctagcatcccgctcctgctcctaaattctttatcagacatagatctgtgtggtgagcactcaaaatttacgaggtttcgactaaaaccatttggcacatcagatgggttgagtctacaaatcaaaggagatagatatattcagaagatagaggaaagattgttcacattagagaaactcaaggatctgcgggaacttgaaatccgggactatcaatcagtgatattccaacgtcaattctgggaaggcttcgaacagttgacatcattgaaaaagtttagagtgatcaagtgcccagaaatattttctactaactttgagctatttctgcctccgtcagttgaggaacttgagttgagtggatgcaacattacattgatacaactatcacaactcctcgtgaaccttcatttacttaagagtttcaagttaactaattgccaaggggtaacatccttacctgtagggttgtttacagatgaacagaacacaatgtcagaaggctcatggcacattcctcccagatgcttcacgaatctggaaagtttgcaaatctctttcacaacagctccatctgatgcaaattcaattatgcactttacgagcaagaaaggcctaggaagatttgtatctcttaagaaaattgttgtagaaaattgccctactctgctatctagagcgctttcaggaggagcatctcacatatctccatcatctttggataaactctgcatgactggtatccaagacagcactctgcagttctcagatgtctcttccatcgcggatttagatgtgtctggatgcccgaatttggcatgtctcgacctgagttcttgtaccgcgctagaaaagttgtgtgttatagattgccatttgttacagtcaattgaaggtttgccgtcatgctcagcactgagggatttgagaattggaaactgtgcattgctgccttcgctcagcgcatcactcgacaccctgaaaacactgagcatagagagtaacacaaatctagcatctctggaactgaaatcatgcacatcattgcagaaactatgcatcgaagactgcccggcactgacatcatgggaaggtttgaaatcccttgtttctcttgagatcttgaaagttgaagcgtctcctgggttcataacgagatggatatcagcagcagctgaagttaatatcgaggagaagaatttctcactaccacttgaaaagctcaacgttgataacattgatgtcctttgtgtgcccatatgcagccagttaacttctctcaagatattatccattgaagaggatcgtcacgatccagatggtcatgtgaagtttttgacagacaaccatgtcaaaggactgtcatttctcacctgcttgagatttcttgatctggaaaactttgagcaactccggtcactgcctgcagaacttggatcccttgcatccctgcagagactacatcttggcaactgtggacatattacttccctgccggtagggggtctcccagcttcgctcaaggacatggaactctataattgcagcaaagaactaaacgtactgtgccgagatatgcttagacttcgaagaaacttacatttgtgggtggatggcgacgaggaggatttcttttcacagaattgctctgacgaagaaataagttagcttttgttcgcatatcgtatagcctttacaccaggtatccttttgtacacagataaactggttttcaaattttacttgtgcttcagaattacaatgtatacttgtcctctctattgattgatgttattctggaaaaaaaaaactcagaatcttttttttttttgagaaacatcaatcacaatcttactcgttcatttttgcactaggttcttttttggaagaacagaacaatacgagaacaccttctattttcgatgaagggagcaaaagaaacaaaaaatcaaaatacaagagaagaaaaaagggctacagcctacagatgaaagactattcttggaagtgttgaatctaaattgcctacgtaacaagaagctacgattccggctgacactctggattttttagacaatggaatctttattacaagacttagccaaatactgttactgtggattggtgttgaaatactgtccagtttcaagtgttaaggaaatagagcagaacttcagacatctttcctttaaa
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| CDS seq | ATGTGGATAGCGCAAGATTTGCTATGTTCCGCTGATATTCACACACGACCTGAGGACATTGGAAATGAATACTTTGATGATCTACTTGATtggggatttttcgaaaaacagtttgagcactcaaccttactcatcatgcatgatctaattcatgatctggcacagaaggtttcatctgacgaaagctttaccatagagggcaatgagcctaggaatgcaccgccatgtgttcgtcatgtcagtgtaataacagagtgggagtacaaaacaaaattgaatggcactgtgtatcctaatgattctttcctccaagagttctctaattccttccgtgagttgcaacaaaggagcttaagcacattgatgctgtttgggccacatgacttggattttgcagacacgtttcggcaagaactcaatgaggtaaggtcaatccgtgtgttgaaactggagatggtcttctttgacttggattcattgataggcaacatctcagcatttgtcaatcttcgctatctagaactgggctgcttctacaagggccccaggctggagctaccagaagctatatgcaggctgtatcaccttaaagtcctggatataaagaagaactggggtcctagcacatctttgccaagagaaatgagcaagcttgttaacttgcggcattttattgctgaaaaggagttacatgcaaaaatagctggcatcggaaagatggtttccctgcaggggctaaaggcatttgatgtcaaaaaggaccatgagttcagcatatcacagctgagagggctgaatcagctaaggggatcaataagcatttctagtctttacaatgcagggcatgaagaggctagccaagcaaggctctgtgacaaggataacctaacttgtttgcacctgtcatggctgactttatctaggaaccatgttgcacggcgtactcttcctatcctggaggatcttaaaccacattctggccttagaaatctgcaagttgttggatacaggcattctttaccatcatggctttgcagcactgtccatctcacctctttgcggtcactccacctggatagatgcatacgttggcaaacaattccacatccccagcagttgccttttctccaggagctgcatttgattcaactgcctcgtgtttacaaaatagagattggtcctctgaaggtccttgaaatacgctggttgcaaaatctgaggcagtgcatacttttagataaggaacagtcatatgctaccctacagatccttgaagtggagggatgccccaaattggatgaatttctattgcagattttcatgtcttcgggtgtacaaagcacaaaccaatttcttggtattcacaggcttcagatacacaatgacttccttcgtgctagcatcccgctcctgctcctaaattctttatcagacatagatctgtgtggtgagcactcaaaatttacgaggtttcgactaaaaccatttggcacatcagatgggttgagtctacaaatcaaaggagatagatatattcagaagatagaggaaagattgttcacattagagaaactcaaggatctgcgggaacttgaaatccgggactatcaatcagtgatattccaacgtcaattctgggaaggcttcgaacagttgacatcattgaaaaagtttagagtgatcaagtgcccagaaatattttctactaactttgagctatttctgcctccgtcagttgaggaacttgagttgagtggatgcaacattacattgatacaactatcacaactcctcgtgaaccttcatttacttaagagtttcaagttaactaattgccaaggggtaacatccttacctgtagggttgtttacagatgaacagaacacaatgtcagaaggctcatggcacattcctcccagatgcttcacgaatctggaaagtttgcaaatctctttcacaacagctccatctgatgcaaattcaattatgcactttacgagcaagaaaggcctaggaagatttgtatctcttaagaaaattgttgtagaaaattgccctactctgctatctagagcgctttcaggaggagcatctcacatatctccatcatctttggataaactctgcatgactggtatccaagacagcactctgcagttctcagatgtctcttccatcgcggatttagatgtgtctggatgcccgaatttggcatgtctcgacctgagttcttgtaccgcgctagaaaagttgtgtgttatagattgccatttgttacagtcaattgaaggtttgccgtcatgctcagcactgagggatttgagaattggaaactgtgcattgctgccttcgctcagcgcatcactcgacaccctgaaaacactgagcatagagagtaacacaaatctagcatctctggaactgaaatcatgcacatcattgcagaaactatgcatcgaagactgcccggcactgacatcatgggaaggtttgaaatcccttgtttctcttgagatcttgaaagttgaagcgtctcctgggttcataacgagatggatatcagcagcagctgaagttaatatcgaggagaagaatttctcactaccacttgaaaagctcaacgttgataacattgatgtcctttgtgtgcccatatgcagccagttaacttctctcaagatattatccattgaagaggatcgtcacgatccagatggtcatgtgaagtttttgacagacaaccatgtcaaaggactgtcatttctcacctgcttgagatttcttgatctggaaaactttgagcaactccggtcactgcctgcagaacttggatcccttgcatccctgcagagactacatcttggcaactgtggacatattacttccctgccggtagggggtctcccagcttcgctcaaggacatggaactctataattgcagcaaagaactaaacgtactgtgccgagatatgcttagacttcgaagaaacttacatttgtgggtggatggcgacgaggaggatttcttttcacagaattgctctgacgaagaaataagttag
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| Protein seq | MWIAQDLLCSADIHTRPEDIGNEYFDDLLDWGFFEKQFEHSTLLIMHDLIHDLAQKVSSDESFTIEGNEPRNAPPCVRHVSVITEWEYKTKLNGTVYPNDSFLQEFSNSFRELQQRSLSTLMLFGPHDLDFADTFRQELNEVRSIRVLKLEMVFFDLDSLIGNISAFVNLRYLELGCFYKGPRLELPEAICRLYHLKVLDIKKNWGPSTSLPREMSKLVNLRHFIAEKELHAKIAGIGKMVSLQGLKAFDVKKDHEFSISQLRGLNQLRGSISISSLYNAGHEEASQARLCDKDNLTCLHLSWLTLSRNHVARRTLPILEDLKPHSGLRNLQVVGYRHSLPSWLCSTVHLTSLRSLHLDRCIRWQTIPHPQQLPFLQELHLIQLPRVYKIEIGPLKVLEIRWLQNLRQCILLDKEQSYATLQILEVEGCPKLDEFLLQIFMSSGVQSTNQFLGIHRLQIHNDFLRASIPLLLLNSLSDIDLCGEHSKFTRFRLKPFGTSDGLSLQIKGDRYIQKIEERLFTLEKLKDLRELEIRDYQSVIFQRQFWEGFEQLTSLKKFRVIKCPEIFSTNFELFLPPSVEELELSGCNITLIQLSQLLVNLHLLKSFKLTNCQGVTSLPVGLFTDEQNTMSEGSWHIPPRCFTNLESLQISFTTAPSDANSIMHFTSKKGLGRFVSLKKIVVENCPTLLSRALSGGASHISPSSLDKLCMTGIQDSTLQFSDVSSIADLDVSGCPNLACLDLSSCTALEKLCVIDCHLLQSIEGLPSCSALRDLRIGNCALLPSLSASLDTLKTLSIESNTNLASLELKSCTSLQKLCIEDCPALTSWEGLKSLVSLEILKVEASPGFITRWISAAAEVNIEEKNFSLPLEKLNVDNIDVLCVPICSQLTSLKILSIEEDRHDPDGHVKFLTDNHVKGLSFLTCLRFLDLENFEQLRSLPAELGSLASLQRLHLGNCGHITSLPVGGLPASLKDMELYNCSKELNVLCRDMLRLRRNLHLWVDGDEEDFFSQNCSDEEIS |
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| Function | Putative disease resistance protein At3g14460 [UniProtKB/Swiss-Prot:Q9LRR5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_08g0010560 | OsKeNa_08g0010560.02 | Chr08 | 12343067 | 12346654 | + | NAM | ||
| CDS seq | ATGTGGATAGCGCAAGATTTGCTATGTTCCGCTGATATTCACACACGACCTGAGGACATTGGAAATGAATACTTTGATGATCTACTTGATtggggatttttcgaaaaacagtttgagcactcaaccttactcatcatgcatgatctaattcatgatctggcacagaaggtttcatctgacgaaagctttaccatagagggcaatgagcctaggaatgcaccgccatgtgttcgtcatgtcagtgtaataacagagtgggagtacaaaacaaaattgaatggcactgtgtatcctaatgattctttcctccaagagttctctaattccttccgtgagttgcaacaaaggagcttaagcacattgatgctgtttgggccacatgacttggattttgcagacacgtttcggcaagaactcaatgaggtaaggtcaatccgtgtgttgaaactggagatggtcttctttgacttggattcattgataggcaacatctcagcatttgtcaatcttcgctatctagaactgggctgcttctacaagggccccaggctggagctaccagaagctatatgcaggctgtatcaccttaaagtcctggatataaagaagaactggggtcctagcacatctttgccaagagaaatgagcaagcttgttaacttgcggcattttattgctgaaaaggagttacatgcaaaaatagctggcatcggaaagatggtttccctgcaggggctaaaggcatttgatgtcaaaaaggaccatgagttcagcatatcacagctgagagggctgaatcagctaaggggatcaataagcatttctagtctttacaatgcagggcatgaagaggctagccaagcaaggctctgtgacaaggataacctaacttgtttgcacctgtcatggctgactttatctaggaaccatgttgcacggcgtactcttcctatcctggaggatcttaaaccacattctggccttagaaatctgcaagttgttggatacaggcattctttaccatcatggctttgcagcactgtccatctcacctctttgcggtcactccacctggatagatgcatacgttggcaaacaattccacatccccagcagttgccttttctccaggagctgcatttgattcaactgcctcgtgtttacaaaatagagattggtcctctgaaggtccttgaaatacgctggttgcaaaatctgaggcagtgcatacttttagataaggaacagtcatatgctaccctacagatccttgaagtggagggatgccccaaattggatgaatttctattgcagattttcatgtcttcgggtgtacaaagcacaaaccaatttcttggtattcacaggcttcagatacacaatgacttccttcgtgctagcatcccgctcctgctcctaaattctttatcagacatagatctgtgtggtgagcactcaaaatttacgaggtttcgactaaaaccatttggcacatcagatgggttgagtctacaaatcaaaggagatagatatattcagaagatagaggaaagattgttcacattagagaaactcaaggatctgcgggaacttgaaatccgggactatcaatcagtgatattccaacgtcaattctgggaaggcttcgaacagttgacatcattgaaaaagtttagagtgatcaagtgcccagaaatattttctactaactttgagctatttctgcctccgtcagttgaggaacttgagttgagtggatgcaacattacattgatacaactatcacaactcctcgtgaaccttcatttacttaagagtttcaagttaactaattgccaaggggtaacatccttacctgtagggttgtttacagatgaacagaacacaatgtcagaaggctcatggcacattcctcccagatgcttcacgaatctggaaagtttgcaaatctctttcacaacagctccatctgatgcaaattcaattatgcactttacgagcaagaaaggcctaggaagatttgtatctcttaagaaaattgttgtagaaaattgccctactctgctatctagagcgctttcaggaggagcatctcacatatctccatcatctttggataaactctgcatgactggtatccaagacagcactctgcagttctcagatgtctcttccatcgcggatttagatgtgtctggatgcccgaatttggcatgtctcgacctgagttcttgtaccgcgctagaaaagttgtgtgttatagattgccatttgttacagtcaattgaaggtttgccgtcatgctcagcactgagggatttgagaattggaaactgtgcattgctgccttcgctcagcgcatcactcgacaccctgaaaacactgagcatagagagtaacacaaatctagcatctctggaactgaaatcatgcacatcattgcagaaactatgcatcgaagactgcccggcactgacatcatgggaaggtttgaaatcccttgtttctcttgagatcttgaaagttgaagcgtctcctgggttcataacgagatggatatcagcagcagctgaagttaatatcgaggagaagaatttctcactaccacttgaaaagctcaacgttgataacattgatgtcctttgtgtgcccatatgcagccagttaacttctctcaagatattatccattgaagaggatcgtcacgatccagatggtcatgtgaagtttttgacagacaaccatgtcaaaggactgtcatttctcacctgcttgagatttcttgatctggaaaactttgagcaactccggtcactgcctgcagaacttggatcccttgcatccctgcagagactacatcttggcaactgtggacatattacttccctgccggtagggggtctcccagcttcgctcaaggacatggaactctataattgcagcaaagaactaaacgtactgtgccgagatatgcttagacttcgaagaaacttacatttgtgggtggatggcgacgaggaggatttcttttcacagaattgctctgacgaagaaataagttag
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| Protein seq | MWIAQDLLCSADIHTRPEDIGNEYFDDLLDWGFFEKQFEHSTLLIMHDLIHDLAQKVSSDESFTIEGNEPRNAPPCVRHVSVITEWEYKTKLNGTVYPNDSFLQEFSNSFRELQQRSLSTLMLFGPHDLDFADTFRQELNEVRSIRVLKLEMVFFDLDSLIGNISAFVNLRYLELGCFYKGPRLELPEAICRLYHLKVLDIKKNWGPSTSLPREMSKLVNLRHFIAEKELHAKIAGIGKMVSLQGLKAFDVKKDHEFSISQLRGLNQLRGSISISSLYNAGHEEASQARLCDKDNLTCLHLSWLTLSRNHVARRTLPILEDLKPHSGLRNLQVVGYRHSLPSWLCSTVHLTSLRSLHLDRCIRWQTIPHPQQLPFLQELHLIQLPRVYKIEIGPLKVLEIRWLQNLRQCILLDKEQSYATLQILEVEGCPKLDEFLLQIFMSSGVQSTNQFLGIHRLQIHNDFLRASIPLLLLNSLSDIDLCGEHSKFTRFRLKPFGTSDGLSLQIKGDRYIQKIEERLFTLEKLKDLRELEIRDYQSVIFQRQFWEGFEQLTSLKKFRVIKCPEIFSTNFELFLPPSVEELELSGCNITLIQLSQLLVNLHLLKSFKLTNCQGVTSLPVGLFTDEQNTMSEGSWHIPPRCFTNLESLQISFTTAPSDANSIMHFTSKKGLGRFVSLKKIVVENCPTLLSRALSGGASHISPSSLDKLCMTGIQDSTLQFSDVSSIADLDVSGCPNLACLDLSSCTALEKLCVIDCHLLQSIEGLPSCSALRDLRIGNCALLPSLSASLDTLKTLSIESNTNLASLELKSCTSLQKLCIEDCPALTSWEGLKSLVSLEILKVEASPGFITRWISAAAEVNIEEKNFSLPLEKLNVDNIDVLCVPICSQLTSLKILSIEEDRHDPDGHVKFLTDNHVKGLSFLTCLRFLDLENFEQLRSLPAELGSLASLQRLHLGNCGHITSLPVGGLPASLKDMELYNCSKELNVLCRDMLRLRRNLHLWVDGDEEDFFSQNCSDEEIS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_08g0010560 | OsKeNa_08g0010560.01 | Chr08 | 12339581 | 12346653 | + | NAM | ||
| CDS seq | atggacaaggcggcggttgttccacttccaatcaccggaggagtcaacgacgatcgtactgctgcgctgcagcagtgggcttccaccgtcggcttcggaggcgaggtggggcgcctcgtcgaagcccaccgacgcctcggctcggtgctcgcggagacgcaggggaaggagatccggaacaaggagctccagcggcgcctcagggaggcctcgcatgatgctgcccgcgcccgtgacctcctcggcgagctcgagtactaccgcatccgtgaggaggtggagcgcgacgaccacgataagctattgcatgacaatgccaatggaaatttgcttctctccatgcctcaaagggatgttgagttctttaacaatgatgcagcaaaagatgacaaagacaccacagaaagttctcttagcaacacagattcatctgcatctgctcttcaggttactacgtacattgctagtagcagtagtccagtaccctatctggagactcttaacaagtgcatctcgaatgagataagtaaatacactgaaaaatgctacgggatagccaaacaggtgagtgaagctcttgagcttgaaagtctggattacctttacgcgcacaaataccagagaacaagaacagatcatcgggagacatcaccatgccaaagtgaacccaaagttcatgggagggaccaacagcgtgacttgataataagcaagttaacaagtgaggaatgtgctaggaagaaactctctatccttgccatcatcggtgatggaggtattgggaaaactactctggctaagctagtcttcaacaactcaacagtgtcaaagcattttgacgttctgttatgggtttatgtatctgttcacttcgatcaaaataagattatgcaggaaatgttggactccttttgcggggatgagcatgatgaaatcaagaaatcgaaggagcttcaactccaagacaaacttgactacttattgaagtcaaaacgagtgctacttgttatggatgacatgtgggaggatagcacaaaggaaaaatgggatgagctgttaaatccattgcttaaaaacgatgttatggggaacagtgttcttgtcacaactcgtaaaccatctgtggcaacaatgatagaagcagcagatcacatcaacctggatggtttgaaaaaagatgacttttggtgtttgttcaaggaatgtgtatttggacatgagaactataaaggagaaccaagactggaaaaaattgggcagcagatagttgacaagttaaagggcaatcctttagcagcaaagactgtaagcaaagtattgagaaggagctttgacgttgattactggaggagaattctgcataccagtgaatggaagtacaaaaatgatgagaacgatatcatgccggccttgatgatcagctacaaatatcttccagctcaccttcaaagttgtttctcgtactgtgctgtgTtTCCCAAAGTATCATAG
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| Protein seq | MDKAAVVPLPITGGVNDDRTAALQQWASTVGFGGEVGRLVEAHRRLGSVLAETQGKEIRNKELQRRLREASHDAARARDLLGELEYYRIREEVERDDHDKLLHDNANGNLLLSMPQRDVEFFNNDAAKDDKDTTESSLSNTDSSASALQVTTYIASSSSPVPYLETLNKCISNEISKYTEKCYGIAKQVSEALELESLDYLYAHKYQRTRTDHRETSPCQSEPKVHGRDQQRDLIISKLTSEECARKKLSILAIIGDGGIGKTTLAKLVFNNSTVSKHFDVLLWVYVSVHFDQNKIMQEMLDSFCGDEHDEIKKSKELQLQDKLDYLLKSKRVLLVMDDMWEDSTKEKWDELLNPLLKNDVMGNSVLVTTRKPSVATMIEAADHINLDGLKKDDFWCLFKECVFGHENYKGEPRLEKIGQQIVDKLKGNPLAAKTVSKVLRRSFDVDYWRRILHTSEWKYKNDENDIMPALMISYKYLPAHLQSCFSYCAVFPKVS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.205706 | 2.300084 | 1.157422 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0296700 | RBH | 0.425832 | 0.145567 | 1.752014 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g20000 | RBH | 0.287970 | 0.097906 | 0.451002 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0296700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0010840 | RBH | 0.262697 | 4.642927 | 2.074652 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0010550 | RBH | 0.0 | 0.000000 | 0.498377 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0011020 | RBH | 0.380376 | 3.219040 | 2.917733 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0010890 | RBH | 0.043021 | 0.065238 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0010420 | RBH | 1.436484 | 5.539212 | 3.518059 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0183700 | RBH | 2.4892195 | 7.069073 | 4.7348125 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0010450 | RBH | 0.019499 | 0.353436 | 0.387453 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0186400 | RBH | 2.511582 | 5.3643765 | 8.224752 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0010020 | RBH | 0.128493 | 0.175527 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0010170 | RBH | 0.097403 | 2.704119 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0010030 | RBH | 0.000000 | 7.383863 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0010800 | RBH | 0.259909 | 0.399256 | 0.247849 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0010130 | RBH | 0.0 | 1.604660 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G010270 | RBH | 0.198263 | 1.236443 | 1.122527 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0010250 | RBH | 0.095374 | 7.131880 | 1.731660 |
