Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_08g0002390 | OGI:08005070 | 15/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr08:1988142-1988321 | ||||||||
| Gene Symbol | OsSTA204 | ||||||||||
| DNA seq | atggcggagggcggcaacgacggttcggttgcgggggatcggctcatggttgcaacaatcaagcgcaagcgggagcttgccgaagaagatggagattcttcttCcccttgtagcgctaatcgatccctcgacatggaggtagtggaggagaaattgtattgctcttatggtgagtactag |
||||||||||
| CDS seq | atggcggagggcggcaacgacggttcggttgcgggggatcggctcatggttgcaacaatcaagcgcaagcgggagcttgccgaagaagatggagattcttcttCcccttgtagcgctaatcgatccctcgacatggaggtagtggaggagaaattgtattgctcttatggtgagtactag |
||||||||||
| Protein seq | MAEGGNDGSVAGDRLMVATIKRKRELAEEDGDSSSPCSANRSLDMEVVEEKLYCSYGEY |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_08g0002390 | OsKeNa_08g0002390.01 | Chr08 | 1988142 | 1988321 | + | NAM | ||
| CDS seq | atggcggagggcggcaacgacggttcggttgcgggggatcggctcatggttgcaacaatcaagcgcaagcgggagcttgccgaagaagatggagattcttcttCcccttgtagcgctaatcgatccctcgacatggaggtagtggaggagaaattgtattgctcttatggtgagtactag |
|||||||
| Protein seq | MAEGGNDGSVAGDRLMVATIKRKRELAEEDGDSSSPCSANRSLDMEVVEEKLYCSYGEY |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0134900 | SBH | 1.847746 | 2.290126 | 9.427836 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g04000 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0134900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0002340 | RBH | 0.0 | 0.0 | 4.933166 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0002440 | SBH | 0.431119 | 2.444398 | 4.576127 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0002390 | RBH | 0.0 | 0.0 | 5.527360 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0002360 | RBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0002200 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0002080 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0032300 | RBH | 0 | 0.1177045 | 0.307597 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0002220 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0002220 | RBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0002090 | RBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0002260 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0002170 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G002190 | RBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0002110 | RBH | 0.000000 | 0.000000 | 2.044479 |
