Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_07g0025080 | OGI:07074010 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr07:27327809-27333517 | ||||||||
| Gene Symbol | CDPK30, OsCDPK30, OsCPK30 | ||||||||||
| DNA seq | acagagaaatgaacagcacacagttgaatctgtaacctcagggctgtcgcatactggcataataacacaatgagagaccaaggggtgagacgttaaatgtcttatttgagacaaaagatgcactactacaatgcaagactttgacaaacaccagtctcaaatcttttcaacccttccatattctttttcctatcctcatcatctgtacatcgtctacacagcttcagtacaacatcaatccgacgtggcgaaggggaggggtagaagtagtagcagcaagaacattttcacctcttacacaaactgtcactttcttttttttgtctgattttcaagacatcctctccaaccacctcaaaccgcgcaacacaacgaacaccatccagagaatttggcttagccatcaatttgacctcattggttgatgcaagaatgattttatcttaggctttcgggatcgatcgcgaagaaactccgtgcaaaagtttaatgaatccaaggaaactaagcttcccatcggcgtgtctgatccaatcttggagtacaacatgaagagggactgatggaccaagtccaagttcctaagagatgaaaaatataacagttagaaatgtttaataatcatgcgaaaaagttacttcagctcaaatcataccgatgcaagctcctcaattacaataggtcggttgccctccttatcgaatagctcgtatgcacgccgtgcgtgctgctcccatgtttccaaagcttccatctgataaacgctgacggcagaagcagcgaactcttcaaaatccaattttctgtactgaagagtgcacacctagtaccatggcttgagtaggtcagtgtttatctcagtccgatatactaacacaagagaatgttctatgaaagagtcttaccgtgttaacaaagtcaataaccctagaatccttcattgcatctgtagaattctttaccaaggcctgtaggaacatttacttattcagcaattgcatgctataaattagatcaagtaacaaaggtgagaatacctaccgttttcaaattttgcaaggagatataaccattcttgtttggacccaacaattcaaattgctctcttagatagaacagttgatttgccgtcaatgtcttagctagggcctgcaaaatgtatggacattgcttaaaatggctagttggtgatgtcatcagagtcaagacatatcggtataagcctacttaaactgcacaaccaaaagcaatatattgctcgtacatggataacttgacacatgtaaaaaatgaaaaaaaatataagcagcaagaatagtcatttacagaccagataagaacaacacaaaggtttatgcataccctcaaagcggacttccgcaaggaagacgaactgatataagctcgcataagcttgtagattatcatatctaaaggtattttcacttgttgagaatttcggatccacggatgacctgcagatatcatgatgcaagtgagcaattaaccatcattcgataaaaagcgagtgccacaatattacactgacaaacaaatctgatgcttactgagagcttgtgcagcagtcatcctcttgcggtaatccttattaagcagtcgttttacaaagtcttttgcttcggcagtgagagtaggccatggagcctcatcaaaacttggttctgccttcagcacagctcgaaatattcctgattcggtgcgtgcccagaaaggacggctcccacaaagcaaaatgtaggcaatcactccaatgctccacatatctgcctcagtgccataagatcgatgaagcacctcaggagcaacataatatgcacttccgacaatgtcattaagtctttcatctgcagaatatagcaatgatatgatatctcaacacatttaaatttggtttggcaaggataaatactaaagaagaatcaaaactggactctgtaaatctaacctggcttcacaaagtcagacaagccaaagtctatgaccttcaaggcagagttttcatcctttgaggtgaaaagaaaattctggaaaagggaacaacaaatatggttatttacaaaataatgcatttggtctgctgactgctagactcaatagtagactttgggtaaaaaaaattcagaaaatttatagaaataacaatagaagagaaaatgtcttatgtcagttagagcccatattcaacattaacaatttttaggttgtaacatgaacttcttaacattggctattaattgtttggcagcaagcctacctctggtttcagatcacgatggacaacaccttggagatggcaaaatgacacaacactcaaaatttgcaccataacaacctttgcatcttcctcagagtattttccacctctgtgaagaaagaaagtaagttataactcaaatctagcagaattagttacaagcattgtttacaaaataaatatcatgactctaccttgccaaaatcctatccagtagttcacctcctttacatagcctgaaacagaaaaggcaatcacattaagttaaatgtaatcaagtgatgcaagttgcaggaaagcaccattttttatgagtatcttgaatttttaatttgactgggatatgttatcttgaattataaacaactgatcatagaggagctctgatcaacatcatgcacgaaattttatattttttatagtaaccacggcatgatgggaatatgttattgagattgaaagtacaaatccttgctgacagaaaatgatctatttatatatcaatgcttggattctcatgtatcagggtagtttcacaaacattaatgacaggaacaaagccaaacattccaccaagatgaaataacatttttttttcatctctgaaccttctaatgtatacaagacaagaatcgcatgcatgacagcaacaaatgaagacagaagttaaaggagacgacccggcaaaaaaagaagttaaaggagagcactgtatggaataagtgcacacttactccataactatatacacattatcttcatcctcgaaagcatcatagaactgcactaggttactgtgtcctgtcagcgaactcaatattctgacttctcttctgacatcttcaatggcaatagcagtcgtcatctgcccagagacttaatttggtaagagtagaaagcagcatgaactggcattgcagtaaacagctaccaagtgtaaacgagtaatgaaatttgcaaatgagtaaacaacccacaagcaaaatatgataattcttttacataatgaactatatctataagatcaatcaattatattacttactagtaagtaaataaaagcatgcaactacaacaatgccagctcaacttccatttatcatggtaatgggcaacatatgtagatctcgaagcgcgaattatgacacctatgcgagcaagccaacaaccaactactgttcggttcaatgttgtacaacagtgcactagacagacaataagtgatcaattatgggtgaaaagaaatgaaatgcctattgctggaattaatgccctcaggacacgaataacactagaagaatcaaccaaagctacaccaccattctataataaaatgaacatatactccagtatcaaagtgacaagtggagtgctccattagaaatccaacaagaacaacactcttgcaactgtctttgagctcaatcttatttttctggaaagaataaaaccaagaaacgcagcattgctgacattctaacaattgactgcaattgaccgaggaagaacacgagcacatggaatgtgagaagccaagaggagggtgggggcattacccccttgcattggcaacagaaggattgccagctttgctcataaaagcactggactggccgcatctacagggccttaaattgaatgaccctttcatacaattgcagaggaggcgcattatgagcaaactctttccacagaattgaagcatcaagctgtgcagcttcagcagcaaactctgctcccctttttgacctgcagatctatccaaagagggtcatctgctccatttaccctccccgaccccgatgatggaagcgtgaggacaaaagatggtggtggcaccaagaactcgacaagcgttgaaaccatgagcatggcatgaagccaatcaatgctgcaggaggcagtccacgtccagatggatggacatggcattggcaatgacatatcttggcacgaatggtctcaaagcggcgaggttacctcccaacaataatcacgagcaccccgggagctaaaacgaaaacgaagtgccggctaaaggtggctccttttttccaatatcctcgtgcttgaatcaaccaacgttctaccaaatactaccaaatggagctaagatgcaaaatcagagttgcatcaaagtgaacttgattaaaagaaccccgcaacaaaaaaaaaaagaaaactcgattaaaaagaaaataatggagaatccgaatgccataagttaaatctgcacgtcagaaatgattggatcttaacgacaaaactgagcagaagcagttgattaattcacgcagggaaaattattttggtcaaatgcagaggcatgtgttccatttcaagaagaagaaagaagcgattgaggcgtggcaatggcgggaatccgaccttggctttggggatgaccttgacggcgacgtcgtggcccttgtggtcgcccttcttggccttggcggagcaggtgtagccgaagtggccgcggccgacctcgtcgccgagctcgtacttggcgaagaagtgcttggagaagccgaagcccttgtcgaggccgacctcggcctcgccgccctccgggatgggcgcctcgttgggcttcaccgacccgtgccgccgcgccaggagcgcgcggatgtgcttcgccggcgacggcggggggaacggccgcttcaacccgccgcgcgccggcgtcgacgccacgctcgagttcgccggcgagctcttgtagctcgacgccggcagcgggctcggcaggtagaacgggaacttcggctgcttcggcgtgcccggcttcgccgccgccgccgccgccgccgccgcagccggacccggcgaggcggcgccggcgacggctacaccggccgccgccgccgcctcctccgcctcgggctccgggatttggctcggcttgccatgacagagacccatggaccggatcaagaacaccaccacggctcgagctcaacgaccaaactcgcgaaattgcagaattctcccagaaaaaaaaaaccgaagcaatggtgggtcaaagaatcatcacgcgttccaaaggccccgagaaatcatcccgaattgctcgcatggctttgccgaattcttcaagcgaatgaatgaaagaaagaaacctccacacgaacagcgagctcgcctgcaattcggatcccaggaacagaagaacaataaaaccagccttcaaaatccttttcttggagtgaccaatgcaacaagcacagagctcaggcagagcaaaaatggcacagaacgagagagaagcctggaagctggaagatggagagtcggatcagaggaaccccaagaacaagaacatattccttgattcttgaagtggccaagcaattggaaaagctggaagctttgagtgaaaggcttggatcagaggggaatgggagggcacagctggtgagtgaatcttgtgt
More
|
||||||||||
| CDS seq | atgggtctctgtcatggcaagccgagccaaatcccggagcccgaggcggaggaggcggcggcggcggccggtgtagccgtcgccggcgccgcctcgccgggtccggctgcggcggcggcggcggcggcggcggcgaagccgggcacgccgaagcagccgaagttcccgttctacctgccgagcccgctgccggcgtcgagctacaagagctcgccggcgaactcgagcgtggcgtcgacgccggcgcgcggcgggttgaagcggccgttccccccgccgtcgccggcgaagcacatccgcgcgctcctggcgcggcggcacgggtcggtgaagcccaacgaggcgcccatcccggagggcggcgaggccgaggtcggcctcgacaagggcttcggcttctccaagcacttcttcgccaagtacgagctcggcgacgaggtcggccgcggccacttcggctacacctgctccgccaaggccaagaagggcgaccacaagggccacgacgtcgccgtcaaggtcatccccaaagccaagatgacgactgctattgccattgaagatgtcagaagagaagtcagaatattgagttcgctgacaggacacagtaacctagtgcagttctatgatgctttcgaggatgaagataatgtgtatatagttatggagctatgtaaaggaggtgaactactggataggattttggcaagaggtggaaaatactctgaggaagatgcaaaggttgttatggtgcaaattttgagtgttgtgtcattttgccatctccaaggtgttgtccatcgtgatctgaaaccagagaattttcttttcacctcaaaggatgaaaactctgccttgaaggtcatagactttggcttgtctgactttgtgaagccagatgaaagacttaatgacattgtcggaagtgcatattatgttgctcctgaggtgcttcatcgatcttatggcactgaggcagatatgtggagcattggagtgattgcctacattttgctttgtgggagccgtcctttctgggcacgcaccgaatcaggaatatttcgagctgtgctgaaggcagaaccaagttttgatgaggctccatggcctactctcactgccgaagcaaaagactttgtaaaacgactgcttaataaggattaccgcaagaggatgactgctgcacaagctctcagtcatccgtggatccgaaattctcaacaagtgaaaatacctttagatatgataatctacaagcttatgcgagcttatatcagttcgtcttccttgcggaagtccgctttgagggccctagctaagacattgacggcaaatcaactgttctatctaagagagcaatttgaattgttgggtccaaacaagaatggttatatctccttgcaaaatttgaaaacggccttggtaaagaattctacagatgcaatgaaggattctagggttattgactttgttaacacggtgtgcactcttcagtacagaaaattggattttgaagagttcgctgcttctgccgtcagcgtttatcagatggaagctttggaaacatgggagcagcacgcacggcgtgcatacgagctattcgataaggagggcaaccgacctattgtaattgaggagcttgcatcggaacttggacttggtccatcagtccctcttcatgttgtactccaagattggatcagacacgccgatgggaagcttagtttccttggattcattaaacttttgcacggagtttcttcgcgatcgatcccgaaagcctaa
More
|
||||||||||
| Protein seq | MGLCHGKPSQIPEPEAEEAAAAAGVAVAGAASPGPAAAAAAAAAAKPGTPKQPKFPFYLPSPLPASSYKSSPANSSVASTPARGGLKRPFPPPSPAKHIRALLARRHGSVKPNEAPIPEGGEAEVGLDKGFGFSKHFFAKYELGDEVGRGHFGYTCSAKAKKGDHKGHDVAVKVIPKAKMTTAIAIEDVRREVRILSSLTGHSNLVQFYDAFEDEDNVYIVMELCKGGELLDRILARGGKYSEEDAKVVMVQILSVVSFCHLQGVVHRDLKPENFLFTSKDENSALKVIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKAEPSFDEAPWPTLTAEAKDFVKRLLNKDYRKRMTAAQALSHPWIRNSQQVKIPLDMIIYKLMRAYISSSSLRKSALRALAKTLTANQLFYLREQFELLGPNKNGYISLQNLKTALVKNSTDAMKDSRVIDFVNTVCTLQYRKLDFEEFAASAVSVYQMEALETWEQHARRAYELFDKEGNRPIVIEELASELGLGPSVPLHVVLQDWIRHADGKLSFLGFIKLLHGVSSRSIPKA |
||||||||||
| Function | Calcium/calmodulin-dependent serine/threonine-protein kinase 1 [UniProtKB/Swiss-Prot:Q10KY3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_07g0025080 | OsKeNa_07g0025080.01 | Chr07 | 27327809 | 27333517 | - | NAM | ||
| CDS seq | atgggtctctgtcatggcaagccgagccaaatcccggagcccgaggcggaggaggcggcggcggcggccggtgtagccgtcgccggcgccgcctcgccgggtccggctgcggcggcggcggcggcggcggcggcgaagccgggcacgccgaagcagccgaagttcccgttctacctgccgagcccgctgccggcgtcgagctacaagagctcgccggcgaactcgagcgtggcgtcgacgccggcgcgcggcgggttgaagcggccgttccccccgccgtcgccggcgaagcacatccgcgcgctcctggcgcggcggcacgggtcggtgaagcccaacgaggcgcccatcccggagggcggcgaggccgaggtcggcctcgacaagggcttcggcttctccaagcacttcttcgccaagtacgagctcggcgacgaggtcggccgcggccacttcggctacacctgctccgccaaggccaagaagggcgaccacaagggccacgacgtcgccgtcaaggtcatccccaaagccaagatgacgactgctattgccattgaagatgtcagaagagaagtcagaatattgagttcgctgacaggacacagtaacctagtgcagttctatgatgctttcgaggatgaagataatgtgtatatagttatggagctatgtaaaggaggtgaactactggataggattttggcaagaggtggaaaatactctgaggaagatgcaaaggttgttatggtgcaaattttgagtgttgtgtcattttgccatctccaaggtgttgtccatcgtgatctgaaaccagagaattttcttttcacctcaaaggatgaaaactctgccttgaaggtcatagactttggcttgtctgactttgtgaagccagatgaaagacttaatgacattgtcggaagtgcatattatgttgctcctgaggtgcttcatcgatcttatggcactgaggcagatatgtggagcattggagtgattgcctacattttgctttgtgggagccgtcctttctgggcacgcaccgaatcaggaatatttcgagctgtgctgaaggcagaaccaagttttgatgaggctccatggcctactctcactgccgaagcaaaagactttgtaaaacgactgcttaataaggattaccgcaagaggatgactgctgcacaagctctcagtcatccgtggatccgaaattctcaacaagtgaaaatacctttagatatgataatctacaagcttatgcgagcttatatcagttcgtcttccttgcggaagtccgctttgagggccctagctaagacattgacggcaaatcaactgttctatctaagagagcaatttgaattgttgggtccaaacaagaatggttatatctccttgcaaaatttgaaaacggccttggtaaagaattctacagatgcaatgaaggattctagggttattgactttgttaacacggtgtgcactcttcagtacagaaaattggattttgaagagttcgctgcttctgccgtcagcgtttatcagatggaagctttggaaacatgggagcagcacgcacggcgtgcatacgagctattcgataaggagggcaaccgacctattgtaattgaggagcttgcatcggaacttggacttggtccatcagtccctcttcatgttgtactccaagattggatcagacacgccgatgggaagcttagtttccttggattcattaaacttttgcacggagtttcttcgcgatcgatcccgaaagcctaa
More
|
|||||||
| Protein seq | MGLCHGKPSQIPEPEAEEAAAAAGVAVAGAASPGPAAAAAAAAAAKPGTPKQPKFPFYLPSPLPASSYKSSPANSSVASTPARGGLKRPFPPPSPAKHIRALLARRHGSVKPNEAPIPEGGEAEVGLDKGFGFSKHFFAKYELGDEVGRGHFGYTCSAKAKKGDHKGHDVAVKVIPKAKMTTAIAIEDVRREVRILSSLTGHSNLVQFYDAFEDEDNVYIVMELCKGGELLDRILARGGKYSEEDAKVVMVQILSVVSFCHLQGVVHRDLKPENFLFTSKDENSALKVIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKAEPSFDEAPWPTLTAEAKDFVKRLLNKDYRKRMTAAQALSHPWIRNSQQVKIPLDMIIYKLMRAYISSSSLRKSALRALAKTLTANQLFYLREQFELLGPNKNGYISLQNLKTALVKNSTDAMKDSRVIDFVNTVCTLQYRKLDFEEFAASAVSVYQMEALETWEQHARRAYELFDKEGNRPIVIEELASELGLGPSVPLHVVLQDWIRHADGKLSFLGFIKLLHGVSSRSIPKA
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.079574 | 7.491390 | 2.309513 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0641200 | RBH | 1.855297 | 0.386221 | 7.955504 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g44710 | RBH | 0.642147 | 0.249718 | 1.030618 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0641200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0025020 | RBH | 0.210387 | 24.695610 | 9.457072 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0018760 | RBH | 0.641090 | 9.071243 | 6.466472 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0024940 | RBH | 0.292961 | 15.962231 | 12.127070 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0024850 | RBH | 0.054079 | 0.873189 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0024990 | RBH | 3.424210 | 18.815315 | 11.139441 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0438900 | RBH | 9.022241 | 18.712429 | 7.720238 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0025510 | RBH | 0.063764 | 1.315422 | 1.242479 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0450200 | RBH | 10.464421 | 9.568267 | 36.374752 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0024790 | RBH | 0.141250 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0024910 | RBH | 0.569536 | 29.793688 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0024840 | RBH | 0.860598 | 21.778738 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0025040 | RBH | 0.683242 | 2.771407 | 1.328261 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0024740 | RBH | 0.043713 | 11.337472 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G024740 | RBH | 0.000000 | 3.500508 | 4.628327 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0024790 | RBH | 0.000000 | 24.190420 | 7.702376 |
