Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_07g0013300 | OGI:07044150 | 4/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr07:16445118-16445438 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgctggccttcaccgacgcgtggctccccccgccgcggccgtcgtcgaccgtcctccacccgtcgtcgccacccccccccccccttctcccctatctcgggcctcttcccgacctcatgcctgcacgagcgccggccgcgtcccgtgctcctctcctggcggcggcgtcggagccggcgcccggtgccgtcctcccttctggatcgatggatttggaggtagtaccggcggtggcggtgttgggaggaatctatatgagtatttcactttcattcctcctcctctcactctcactaccgatcgggagcgcggagtggtga |
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| CDS seq | atgctggccttcaccgacgcgtggctccccccgccgcggccgtcgtcgaccgtcctccacccgtcgtcgccacccccccccccccttctcccctatctcgggcctcttcccgacctcatgcctgcacgagcgccggccgcgtcccgtgctcctctcctggcggcggcgtcggagccggcgcccggtgccgtcctcccttctggatcgatggatttggaggtagtaccggcggtggcggtgttgggaggaatctatatgagtatttcactttcattcctcctcctctcactctcactaccgatcgggagcgcggagtggtga |
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| Protein seq | MLAFTDAWLPPPRPSSTVLHPSSPPPPPLLPYLGPLPDLMPARAPAASRAPLLAAASEPAPGAVLPSGSMDLEVVPAVAVLGGIYMSISLSFLLLSLSLPIGSAEW |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_07g0013300 | OsKeNa_07g0013300.01 | Chr07 | 16445118 | 16445438 | + | NAM | ||
| CDS seq | atgctggccttcaccgacgcgtggctccccccgccgcggccgtcgtcgaccgtcctccacccgtcgtcgccacccccccccccccttctcccctatctcgggcctcttcccgacctcatgcctgcacgagcgccggccgcgtcccgtgctcctctcctggcggcggcgtcggagccggcgcccggtgccgtcctcccttctggatcgatggatttggaggtagtaccggcggtggcggtgttgggaggaatctatatgagtatttcactttcattcctcctcctctcactctcactaccgatcgggagcgcggagtggtga
More
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| Protein seq | MLAFTDAWLPPPRPSSTVLHPSSPPPPPLLPYLGPLPDLMPARAPAASRAPLLAAASEPAPGAVLPSGSMDLEVVPAVAVLGGIYMSISLSFLLLSLSLPIGSAEW |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 1.142608 | 0.121769 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0013270 | RBH | 0.0 | 1.263640 | 3.041675 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0261200 | RBH | 2.8191505 | 9.7809155 | 22.725509 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0266900 | SBH | 6.926081 | 17.968064 | 20.919964 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0013110 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
