Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_06g0028260 | OGI:06083540 | 11/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr06:30540026-30548855 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gcattcacttgaattaataaaaatatcaattttagtacatgccagagaagaatatgtaacccatagactgcggattcagcaccaccgctactaatggttatcttacaaaaccgcatcattgtaaggcacacctacaataccatcagcaagcatatgggaagacagatccccttacatgctctggagatacaactcatccaaacttgtcgaattagaatactggaactaacgaagaaaaggctaataaatttccctgcccaaacatgtatgtacagatgaccgatggctgctcaacctgcaaacacaaggtgaatgccattgcaaagatcagccatacaagaaaacatcatattctttgattgataaagtactaccacacaagcataaggtggtggtatgcactattgttatggctaactgtgaacaggaaaaagaggggtgggaagaatgattacctgtgtgttcaccacctgtagaatctgaaaagttattttgctcagaagggaggaacgttgacttgccataattgtctaatatttctgcaagataagtaaatgtggagagcaaacaaaagtatgaggaaagaaaaatggtactcaaatcagaaagcaaaataaatcaatattgtcattagaatgtacctgtgctttgactgaaatcctctggtaggtctgaaaaaaaatttcggggaagctgactcaagaagccaaacgatgatgattcaatatccaaaattgaatcatccagaggttgcccattcaactctgaactgctaaaggatccaccagatgcatcacctattgactggcatgattccaggaaagcattcccgcagaaaccaaaattaccattgctcgaatagcctgattccgtcttaatagtcgtcccattttccacaccaaacagcacagaattagcattctgcactggaagcaaattggaagcatccatgctactatgaaggccctgaatgtctttaccagcataaattaattgatcgctggattgtgtgcaatctactatgccactggaatttccattgcacattacatcatctggcattgcaggcatcggagtagactctgataaaaagcatggattttgcttcactgaaacaaggaaaacagaaggccatattaaaatgaaacaaccccgtaagaggacagtctgtactcaactaaatgcctagccctgcaaacaaagaaaataaagaatggaaagtaaaggcaagcaaatatctttctcttgagcaaccgtgttgtgctcacctaataaacacaaacttcctgagcttacacttggaaaagatcattttcagaaacattaaattcttcaggctcccaaagaactaattatttgttcaccattatacactcacttaaacaatggggtattgcattactactccagttatgctcatatcagtcattgctagaagcttaagtctgaaaaaaatgccttacataggtttgagttggaaccattgggaagaggcatagaagaaggccctggatgataatctttatttataatccttaactggtcctcaagaagtttgttgaaggctgttatttggttcttaagcatcaacctcaaatagtatgctttgaaaaactcacgattattctcctcgagtttctgccaaactggaaagagcaaaaagaaaatcaaccagatgttaacaacagcctacaaaaagaaaatcaaccagatgttaacaacaaaaatgatctaacaataataaaagggcgcaaatcaagataaacataaacggtttcctagttatgttccctttctgtttgacagagccctcctgaaacataaagtaggttcgtagaggggacggaaaaaagaatatttaggcagcatataacagtgtttgttgcaaaattgatgacatggttttttacctaaaccatatttgtgttgtgtgaaccagcatatgtcacaattccacaatcataattgtaacaagatagcaacccatccaactatgcatgacctgcgctgttactagccagttctgaaacctaagaccaacttgcaagtaagctaaatgaaacttttggcatacaaggtaagagcactaccatgctgtgtaacactaggttctatttttgcctcacgggaaagggcatcaacaacttctttcttgtccatgtatagctgaaggcagcaatggataagattctggacctggaacaaaagttagcaacaagagttatccatcagctcaattgaatatgtattaattgttcaagcatgctacacataaaataaactgtgtgttatccaaacgtagtttctaagcatgattcagcataaacgaatgcaaagaatatccataacacggaccttgtgtgcttgcatgcattgcaggctgaacaagtaattagaaccctactaggtatcacaatccgagattatccctaccctactaactaattggcaggtgatcacaaaccctagaatggcactgtcactataagcacgcaaatcaaacttgagtggcactgtatcctctgcgaagaggccaagaaccaacgaattcagtagcaaaacccaacaagaatcaacaagcgttctacatgaaccaaacaaggcactgaactactactgacgatcagctgtatgtcctaacgacagaccttgtcgacgtccgctcctgacatgtcgccggcgctttctccactcctcctgccctaatcccctcctgaacctttcccctgaaaaatccgcaagaagcagtgctagcatcagccaacaacaacacaagattcaggcccagttcacggatcatacctgccctggtcttccccgcgagataatttcagctctcccttgcagcgacgcggagaagagagaaaactccggcagtgaggagatcacgaaggggaggagcggggagaggagcggagtagccagccaccagctcgagatgcaagggagaagagtagggaaaaggaaggggaaggggaagtggaagtggtggtgggctgaagtgggagtggggaagaggagaggattcctaatccacggctctgtccgttctggaatctggggcaccagaaacacttctgcaccagttctatgggaaccctttttttatactgcctgcaagtgatggagaagctttctgcacagaattaataaattgcagtcgattcagtccaattaggccataaaaagtgccttaactgaaagtgtgctcaatgattggatgcaattagcaataggagaaaaagatatacaaatattcacatatgaacttactgactgatgcataagaaattgcaagggggcacaagaaaagggaaagaaagtgagaagtggaggcactttccagctaggttgctaaccggccatcctgtcaccatttgacacaaccccatccaacgccagtgctcacttcatccactggcctgcactccgcggttttagacttagtgcttgtgctcaaaacagtagtcagcctccaccaccatatgcagcaaaatagtctcctgcaatgatcagggagacagctgaatcaataccaacggaaatctgataaaagcctgtttggattgtattaataagcatagaaaataatttcagacctgtcagaatagtcagaggttcacttggcagatgtgctcataacgtgcaatggcagttacacgatttaaccattgattccaggcccaaccaaatagaaaaggcaccttgccacgaacatcttttaccacaaaaacagagtaacaagcgatgcaatgtggtgtgaggatctgatcctcgctgccttttttggatggcaagagaaccttcttatgcggtgcaaatgtttatctcaaactagtagataatccatggtgccgatatggttttaattccaagtgctaagctcggtgactgacctcaattaagctgtgaccgctcttcttcacttccttcacatttgtcatctctttaatccttaaagcagtttctctgtccccaatatcattgaaaaaatttgatacctgcaaagtggtggctggatcttttctccctacatctatcagcatgttggcagctctctttcccagcacattttcaccatgtgctttgcagctctgaagaagtgagctccatgccttggtgtagtgtctcaatggggactgttccatcatttccattgcttccttcacaaaaccatctcgactgagaaggttgaccatacaagcaaaatgtctttcatcaggatccagctcacggctagctctcatgagttcaatcaccagccgtccttcttcaaacattcctgcctgatcacatcctgcaattgcacatagaaaggtaacattgtcaggcttcaggccactagaaaccatctgatcgaatagctccattgctcgtgctccatctccatatcgagcacaggcagatattatagcagtgaagcatatcacatttggatccaacaatccttcaaatatcaagtgtgaactgctcagttgaccagcgcaggcataagcagtgatcaaggaggagcacacagccatgtccatttcaaatcccaatttaacaagacaagaatgtagcatttgacaactggttaaacttggtgaagctgacaaagatatggctttcatagttgcagagaaagtcacatcatcaggtgtcactccctctacaatcatacaatgcaatatctctaaagcagcatcaaacatgttgcagcgaagcgatgatgtgatcagagaattgcagcactccagtgcaatacttggaatttcattgaatattgctaatgaatgatcaaaacagcaacacttcccatacatatcaatgagcgtagtctgaacatgcacactactacaactgaatccaagcttatgaacaatgccatgtatctgaaatccgagttgccagtcccccgttttgccagacaaagcaaggagcgaaacaaatgagcgaattgaaggcatcttgccatgccaaagcatctgtttcaagtaataaactgcttccttcatatgtcctctgtcagcgtacattgataaaatggagttccatgagatgacatcctcagacaggatatcattcagtgccttcactgtgtccactgaatctccaattgcagagtaaagatctacaagagaatttgacaggaaaatgttggatggaatccacccagccttgagaacaactccatggagttgcctgccttgttctagccattcaccattttgatagcaccctttcatggcataacaataggataagccattcagctccaaatactgccgtctcatatcaagaaagcagcagataagctcttcagtcagcttcaggttgcccaagccacgcagtaccacattgcacatggctgtgttctgcagcggcagttcccggaacaatgagagggcagcatgtggtgattcgacatgcatatagtgattaacaagcgcagatccaacaaatggattgcaacacaagcctagggccagcacccggccatggagttgcagtgcctcgtaagtgctgcacactcccaggattgtagagaaggtatgaggggtctccctgatgcctgaagcgaccatccacctgtagacagcacgggcccgatcagcaaggccgtccctgatgaagcctgtgatcatacggttcaaggacgcgacgtctcggacagccatggtcacagacgatctttccacagactatgatgggtcaaacaaagaggaatgcgaaggggagaaggccagttcagaagaatttccggagcaggtgacactgttccatacttccagtttccatcagctaacagcgagttcccccagtgaagagaaacagcagtagtattccttacgaagaaccgcatcatttatcaactcggtggcttcatcactgccgccgccatcaccaaccgtcgtcggaacggatctctttcgtttggcatctctgcatcatcctgagtatcccacatacagaagacatcaggggaaaaaataaaacaaaagaaaagcgcaatccaacttgggaaacagaagaacgaactgctcctccttttaggcggaggggggtgagccggcaagattggatttttacctcagtgagaagggagccggggacgacgggattgggcgtacgagcacaggagcatcacggcggctgggcggcaggaggaagacgacccttctgtctggctgcttttgctttccgtcgtctgcccctaaaggcctgaagatagttggctggcccatccaaaaagcccacaaagcccatcaactaccaaccctgaggattgaactgagagcagcactgctgtgatgctttcagtgacacaggcacacagctgacctctttttcctgaaaacgcatattactggtaacagagtatcaacatgacaaccagagtgtaattaaggagaagaaagagtacctttgttgatcagaaattcaagtgcaattccaaactaatgcgaacaactccagtttacaatgttcctaaacctcagctttttcaccaaaaacatggagtactataaaatggtatttaccaaaaatcgttgcaagaacatgccccctctctgaagtggtggaacctactccggtctctgactatgatttcccggttccaaagcctggagatcaacttgattgcagagtggcagtcctcacataccctgagattctttatgatatgaaccggcaagtttggtgctagactaacgaggccaaaagcaatggctagcttctcactgtgtgctagcagtgtctgttctttctcttcctcatcaacatccactgttacctgtgatgtaatcggcgaatagcctgctgactttaacctgtgtgagatctcctctagcattgcgatgatctccaatatccgtggatgtgatttgtcactaactacaaacttgtgcacctgcccagccacagtaacagaactataacctgcagttttcttaacttgcctttcttccatcaacatccttatctttgacgcatcttcccattttctagagtctatgcatatgttatataactggacatagacagcatcctcgtcaggttctatcttcagaagatgctcagcggcacattgagctaagtctatgcgtttatggactctgcaagcactcaagatggatgcccatatgacagaattcggttgcatgggcatggtcttaacaagatccattgcttcatccaaaagcccactgcgtcccagcaaatcaatcatgcagccatagtgctcaatctgaggatgtatgttgtacaagattctcatctcatcaaagtacaggcagccttcgttcaatagacatgagtggctgcatgcagtcaaaacagcaatgtagctaactggattaggctggaagccgtcacacctcatctggtagaaatattccagaccagccttacccatcccattgaatgcgagacctgcgatcatagcagtccaagcgtgaacatctctcttgcccatacgttggaaaacaatggttgcctcattgaccctcccacatttcatgtacatgtccagcagtgcagtaccaatgtatatgtctgtttccaccagcctcagctcaatgcaagcatgtaatgccctgccctgtggtaatgcacctaagcttgcacaagcagatagaaggctcaccaccgtaaagttgtcaacacgcagatcatgtctcctcatattcatgaacaatagcaacgcctctctaagctggccgctgtggatgtacccagtgatcattgagttgaatgtgatgatatcacggacctccatttgatcaaacagagaccgtgcaacatcaacatggccatgcttgcagtatccatcaattatagcattccatgactgaggtcttcggcctctacccacagcatcaaaaacctctcgtgcatgaccaaagtcaccacacttcgcatacatgtcaatgagcgcaacgacaagattttcactcatcgacatccccttctccttaacaagcgagtgcagtgaacagcccagctccaaatccttgagctgtgagcatgctgagagcacgccaataacagtaacatcatccggtgcaatgccttcagaaagcatgttcttgaagcaatcaacagcctctttggcccgatcagcacgagaataggcagcaatcaaacttgtccacgagatcacatccctcactggagcctgagccagaaggagccgcgcatcagaaagcatgcccattttggccagcccactgatcaccattgtccaggaaaccgcgtccttcacagggatctcgtcaaaagcccgtcgaacatcgccagcaagcccaagctcagtgtacatatggatgagagaattcgcgacgaacggcgcggcagacggtagcatggtccgcaggcaggcggcgtgcagcatcgtgcacaggagggcgcgggggcgggaggaggaggagcacttgaaaaggaagtggaacgtgaacccgtctggtcggacggccgcgcggcgcatccggcggaagaggacgaaggggatgtccgggtctcccgacgaggtcccggcacggaagcaggcgcggagggcggtgtcgaagaggaaggtggaggcgggcattcggtcgaacaggtggagggcgtagcggaggtggaggggatcggatgggggcaggcagttgacgagggagttgaggaggtggtgggcggatggcgggtggaggaggcggccggaggtggtgaggtgggcgtggagctcggcggcttgccggacggtgcgcggcgtcggccatggcaccggcggcatgtcgcggccactccgcgggctctgcgtgcgctcgcgcttgtgacgctctgttacgccgcttggacggcccat
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| CDS seq | atgggccgtccaagcggcgtaacagagcgtcacaagcgcgagcgcacgcagagcccgcggagtggccgcgacatgccgccggtgccatggccgacgccgcgcaccgtccggcaagccgccgagctccacgcccacctcaccacctccggccgcctcctccacccgccatccgcccaccacctcctcaactccctcgtcaactgcctgcccccatccgatcccctccacctccgctacgccctccacctgttcgaccgaatgcccgcctccaccttcctcttcgacaccgccctccgcgcctgcttccgtgccgggacctcgtcgggagacccggacatccccttcgtcctcttccgccggatgcgccgcgcggccgtccgaccagacgggttcacgttccacttccttttcaagtgctcctcctcctcccgcccccgcgccctcctgtgcacgatgctgcacgccgcctgcctgcggaccatgctaccgtctgccgcgccgttcgtcgcgaattctctcatccatatgtacactgagcttgggcttgctggcgatgttcgacgggcttttgacgagatccctgtgaaggacgcggtttcctggacaatggtgatcagtgggctggccaaaatgggcatgctttctgatgcgcggctccttctggctcaggctccagtgagggatgtgatctcgtggacaagtttgattgctgcctattctcgtgctgatcgggccaaagaggctgttgattgcttcaagaacatgctttctgaaggcattgcaccggatgatgttactgttattggcgtgctctcagcatgctcacagctcaaggatttggagctgggctgttcactgcactcgcttgttaaggagaaggggatgtcgatgagtgaaaatcttgtcgttgcgctcattgacatgtatgcgaagtgtggtgactttggtcatgcacgagaggtttttgatgctgtgggtagaggccgaagacctcagtcatggaatgctataattgatggatactgcaagcatggccatgttgatgttgcacggtctctgtttgatcaaatggaggtccgtgatatcatcacattcaactcaatgatcactgggtacatccacagcggccagcttagagaggcgttgctattgttcatgaatatgaggagacatgatctgcgtgttgacaactttacggtggtgagccttctatctgcttgtgcaagcttaggtgcattaccacagggcagggcattacatgcttgcattgagctgaggctggtggaaacagacatatacattggtactgcactgctggacatgtacatgaaatgtgggagggtcaatgaggcaaccattgttttccaacgtatgggcaagagagatgttcacgcttggactgctatgatcgcaggtctcgcattcaatgggatgggtaaggctggtctggaatatttctaccagatgagtaatatgcgttttcaggaaaaagagccaactatcttcaggcctttaggggcagacgacggaaagcaaaagcagccagacagaagggtcgtcttcctcctgccgcccagccgccgtgatgctcctgtgctctctgtggaaagatcgtctgtgaccatggctgtccgagacgtcgcgtccttgaaccgtatgatcacaggcttcatcagggacggccttgctgatcgggcccgtgctgtctacaggtggatggtcgcttcaggcatcagggagacccctcataccttctctacaatcctgggagtgtgcagcacttacgaggcactgcaactccatggccgggtgctggccctaggcttgtgttgcaatccatttgttggatctgcgcttgttaatcactatatgcatgtcgaatcaccacatgctgccctctcattgttccgggaactgccgctgcagaacacagccatgtgcaatgtggtactgcgtggcttgggcaacctgaagctgactgaagagcttatctgctgctttcttgatatgagacggcagtatttggagctgaatggcttatcctattgttatgccatgaaagggtgctatcaaaatggtgaatggctagaacaaggcaggcaactccatggagttgttctcaaggctgggtggattccatccaacattttcctgtcaaattctcttgtagatctttactctgcaattggagattcagtggacacagtgaaggcactgaatgatatcctgtctgaggatgtcatctcatggaactccattttatcaatgtacgctgacagaggacatatgaaggaagcagtttattacttgaaacagatgctttggcatggcaagatgccttcaattcgctcatttgtttcgctccttgctttgtctggcaaaacgggggactggcaactcggatttcagatacatggcattgttcataagcttggattcagttgtagtagtgtgcatgttcagactacgctcattgatatgtatgggaagtgttgctgttttgatcattcattagcaatattcaatgaaattccaagtattgcactggagtgctgcaattctctgatcacatcatcgcttcgctgcaacatgtttgatgctgctttagagatattgcattgtatgattgtagagggagtgacacctgatgatgtgactttctctgcaactatgaaagccatatctttgtcagcttcaccaagtttaaccagttgtcaaatgctacattcttgtcttgttaaattgggatttgaaatggacatggctgtgtgctcctccttgatcactgcttatgcctgcgctggtcaactgagcagttcacacttgatatttgaaggattgttggatccaaatgtgatatgcttcactgctataatatctgcctgtgctcgatatggagatggagcacgagcaatggagctattcgatcagatggtttctagtggcctgaagcctgacaatgttacctttctatgtgcaattgcaggatgtgatcaggcaggaatgtttgaagaaggacggctggtgattgaactcatgagagctagccgtgagctggatcctgatgaaagacattttgcttgtatggtcaaccttctcagtcgagatggttttgtgaaggaagcaatggaaatgatggaacagtccccattgagacactacaccaaggcatggagctcacttcttcagagctgcaaagcacatggtgaaaatgtgctgggaaagagagctgccaacatgctgatagatgtagggagaaaagatccagccaccactttgcaggtatcaaattttttcaatgatattggggacagagaaactgctttaaggattaaagagatgacaaatgtgaaggaagtgaagaagagcggtcacagcttaattgagattccagaacggacagagccgtggattaggaatcctctcctcttccccactcccacttcagcccaccaccacttccacttccccttccccttccttttccctactcttctcccttgcatctcgagctggtggctggctactccgctcctctccccgctcctccccttcgtgatctcctcactgccggagttttctctcttctccgcgtcgctgcaagggagagctgaaattatctcgcggggaagaccagggcaggtccagaatcttatccattgctgccttcagctatacatggacaagaaagaagttgttgatgccctttcccgtgaggcaaaaatagaacctagtgttacacagcatgtttggcagaaactcgaggagaataatctgaagcaaaatccatgctttttatcagagtctactccgatgcctgcaatgccagatgatgtaatgtgcaatggaaattccagtggcatagtagattgcacacaatccagcgatcaattaatttatgctggtaaagacattcagggccttcatagtagcatggatgcttccaatttgcttccagtgcagaatgctaattctgtgctgtttggtgtggaaaatgggacgactattaagacggaatcaggctattcgagcaatggtaattttggtttctgcgggaatgctttcctggaatcatgccagtcaataggtgatgcatctggtggatcctttagcagttcagagttgaatgggcaacctctggatgattcaattttggatattgaatcatcatcgtttggcttcttgagtcagcttccccgaaattttttttcagacctaccagaggatttcagtcaaagcacagaaatattagacaattatggcaagtcaacgttcctcccttctgagcaaaataacttttcagattctacaggtggtgaacacacaggttga
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| Protein seq | MGRPSGVTERHKRERTQSPRSGRDMPPVPWPTPRTVRQAAELHAHLTTSGRLLHPPSAHHLLNSLVNCLPPSDPLHLRYALHLFDRMPASTFLFDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFKCSSSSRPRALLCTMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMSNMRFQEKEPTIFRPLGADDGKQKQPDRRVVFLLPPSRRDAPVLSVERSSVTMAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEALQLHGRVLALGLCCNPFVGSALVNHYMHVESPHAALSLFRELPLQNTAMCNVVLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGFQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLRCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETALRIKEMTNVKEVKKSGHSLIEIPERTEPWIRNPLLFPTPTSAHHHFHFPFPFLFPTLLPCISSWWLATPLLSPLLPFVISSLPEFSLFSASLQGRAEIISRGRPGQVQNLIHCCLQLYMDKKEVVDALSREAKIEPSVTQHVWQKLEENNLKQNPCFLSESTPMPAMPDDVMCNGNSSGIVDCTQSSDQLIYAGKDIQGLHSSMDASNLLPVQNANSVLFGVENGTTIKTESGYSSNGNFGFCGNAFLESCQSIGDASGGSFSSSELNGQPLDDSILDIESSSFGFLSQLPRNFFSDLPEDFSQSTEILDNYGKSTFLPSEQNNFSDSTGGEHTG |
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| Function | Pentatricopeptide repeat-containing protein At3g09040, mitochondrial [UniProtKB/Swiss-Prot:Q9SS83] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_06g0028260 | OsKeNa_06g0028260.01 | Chr06 | 30540026 | 30548855 | - | NAM | ||
| CDS seq | atgggccgtccaagcggcgtaacagagcgtcacaagcgcgagcgcacgcagagcccgcggagtggccgcgacatgccgccggtgccatggccgacgccgcgcaccgtccggcaagccgccgagctccacgcccacctcaccacctccggccgcctcctccacccgccatccgcccaccacctcctcaactccctcgtcaactgcctgcccccatccgatcccctccacctccgctacgccctccacctgttcgaccgaatgcccgcctccaccttcctcttcgacaccgccctccgcgcctgcttccgtgccgggacctcgtcgggagacccggacatccccttcgtcctcttccgccggatgcgccgcgcggccgtccgaccagacgggttcacgttccacttccttttcaagtgctcctcctcctcccgcccccgcgccctcctgtgcacgatgctgcacgccgcctgcctgcggaccatgctaccgtctgccgcgccgttcgtcgcgaattctctcatccatatgtacactgagcttgggcttgctggcgatgttcgacgggcttttgacgagatccctgtgaaggacgcggtttcctggacaatggtgatcagtgggctggccaaaatgggcatgctttctgatgcgcggctccttctggctcaggctccagtgagggatgtgatctcgtggacaagtttgattgctgcctattctcgtgctgatcgggccaaagaggctgttgattgcttcaagaacatgctttctgaaggcattgcaccggatgatgttactgttattggcgtgctctcagcatgctcacagctcaaggatttggagctgggctgttcactgcactcgcttgttaaggagaaggggatgtcgatgagtgaaaatcttgtcgttgcgctcattgacatgtatgcgaagtgtggtgactttggtcatgcacgagaggtttttgatgctgtgggtagaggccgaagacctcagtcatggaatgctataattgatggatactgcaagcatggccatgttgatgttgcacggtctctgtttgatcaaatggaggtccgtgatatcatcacattcaactcaatgatcactgggtacatccacagcggccagcttagagaggcgttgctattgttcatgaatatgaggagacatgatctgcgtgttgacaactttacggtggtgagccttctatctgcttgtgcaagcttaggtgcattaccacagggcagggcattacatgcttgcattgagctgaggctggtggaaacagacatatacattggtactgcactgctggacatgtacatgaaatgtgggagggtcaatgaggcaaccattgttttccaacgtatgggcaagagagatgttcacgcttggactgctatgatcgcaggtctcgcattcaatgggatgggtaaggctggtctggaatatttctaccagatgagtaatatgcgttttcaggaaaaagagccaactatcttcaggcctttaggggcagacgacggaaagcaaaagcagccagacagaagggtcgtcttcctcctgccgcccagccgccgtgatgctcctgtgctctctgtggaaagatcgtctgtgaccatggctgtccgagacgtcgcgtccttgaaccgtatgatcacaggcttcatcagggacggccttgctgatcgggcccgtgctgtctacaggtggatggtcgcttcaggcatcagggagacccctcataccttctctacaatcctgggagtgtgcagcacttacgaggcactgcaactccatggccgggtgctggccctaggcttgtgttgcaatccatttgttggatctgcgcttgttaatcactatatgcatgtcgaatcaccacatgctgccctctcattgttccgggaactgccgctgcagaacacagccatgtgcaatgtggtactgcgtggcttgggcaacctgaagctgactgaagagcttatctgctgctttcttgatatgagacggcagtatttggagctgaatggcttatcctattgttatgccatgaaagggtgctatcaaaatggtgaatggctagaacaaggcaggcaactccatggagttgttctcaaggctgggtggattccatccaacattttcctgtcaaattctcttgtagatctttactctgcaattggagattcagtggacacagtgaaggcactgaatgatatcctgtctgaggatgtcatctcatggaactccattttatcaatgtacgctgacagaggacatatgaaggaagcagtttattacttgaaacagatgctttggcatggcaagatgccttcaattcgctcatttgtttcgctccttgctttgtctggcaaaacgggggactggcaactcggatttcagatacatggcattgttcataagcttggattcagttgtagtagtgtgcatgttcagactacgctcattgatatgtatgggaagtgttgctgttttgatcattcattagcaatattcaatgaaattccaagtattgcactggagtgctgcaattctctgatcacatcatcgcttcgctgcaacatgtttgatgctgctttagagatattgcattgtatgattgtagagggagtgacacctgatgatgtgactttctctgcaactatgaaagccatatctttgtcagcttcaccaagtttaaccagttgtcaaatgctacattcttgtcttgttaaattgggatttgaaatggacatggctgtgtgctcctccttgatcactgcttatgcctgcgctggtcaactgagcagttcacacttgatatttgaaggattgttggatccaaatgtgatatgcttcactgctataatatctgcctgtgctcgatatggagatggagcacgagcaatggagctattcgatcagatggtttctagtggcctgaagcctgacaatgttacctttctatgtgcaattgcaggatgtgatcaggcaggaatgtttgaagaaggacggctggtgattgaactcatgagagctagccgtgagctggatcctgatgaaagacattttgcttgtatggtcaaccttctcagtcgagatggttttgtgaaggaagcaatggaaatgatggaacagtccccattgagacactacaccaaggcatggagctcacttcttcagagctgcaaagcacatggtgaaaatgtgctgggaaagagagctgccaacatgctgatagatgtagggagaaaagatccagccaccactttgcaggtatcaaattttttcaatgatattggggacagagaaactgctttaaggattaaagagatgacaaatgtgaaggaagtgaagaagagcggtcacagcttaattgagattccagaacggacagagccgtggattaggaatcctctcctcttccccactcccacttcagcccaccaccacttccacttccccttccccttccttttccctactcttctcccttgcatctcgagctggtggctggctactccgctcctctccccgctcctccccttcgtgatctcctcactgccggagttttctctcttctccgcgtcgctgcaagggagagctgaaattatctcgcggggaagaccagggcaggtccagaatcttatccattgctgccttcagctatacatggacaagaaagaagttgttgatgccctttcccgtgaggcaaaaatagaacctagtgttacacagcatgtttggcagaaactcgaggagaataatctgaagcaaaatccatgctttttatcagagtctactccgatgcctgcaatgccagatgatgtaatgtgcaatggaaattccagtggcatagtagattgcacacaatccagcgatcaattaatttatgctggtaaagacattcagggccttcatagtagcatggatgcttccaatttgcttccagtgcagaatgctaattctgtgctgtttggtgtggaaaatgggacgactattaagacggaatcaggctattcgagcaatggtaattttggtttctgcgggaatgctttcctggaatcatgccagtcaataggtgatgcatctggtggatcctttagcagttcagagttgaatgggcaacctctggatgattcaattttggatattgaatcatcatcgtttggcttcttgagtcagcttccccgaaattttttttcagacctaccagaggatttcagtcaaagcacagaaatattagacaattatggcaagtcaacgttcctcccttctgagcaaaataacttttcagattctacaggtggtgaacacacaggttga
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| Protein seq | MGRPSGVTERHKRERTQSPRSGRDMPPVPWPTPRTVRQAAELHAHLTTSGRLLHPPSAHHLLNSLVNCLPPSDPLHLRYALHLFDRMPASTFLFDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFKCSSSSRPRALLCTMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMSNMRFQEKEPTIFRPLGADDGKQKQPDRRVVFLLPPSRRDAPVLSVERSSVTMAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEALQLHGRVLALGLCCNPFVGSALVNHYMHVESPHAALSLFRELPLQNTAMCNVVLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGFQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLRCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETALRIKEMTNVKEVKKSGHSLIEIPERTEPWIRNPLLFPTPTSAHHHFHFPFPFLFPTLLPCISSWWLATPLLSPLLPFVISSLPEFSLFSASLQGRAEIISRGRPGQVQNLIHCCLQLYMDKKEVVDALSREAKIEPSVTQHVWQKLEENNLKQNPCFLSESTPMPAMPDDVMCNGNSSGIVDCTQSSDQLIYAGKDIQGLHSSMDASNLLPVQNANSVLFGVENGTTIKTESGYSSNGNFGFCGNAFLESCQSIGDASGGSFSSSELNGQPLDDSILDIESSSFGFLSQLPRNFFSDLPEDFSQSTEILDNYGKSTFLPSEQNNFSDSTGGEHTG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.239439 | 0.231900 | 0.901249 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0705300 | RBH | 1.433975 | 1.395285 | 5.027839 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g49185 | RBH | 0.222728 | 0.751617 | 0.086199 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0705300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0028440 | RBH | 0.359876 | 2.383157 | 2.051016 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0002970 | RBH | 0.135236 | 8.972445 | 3.443527 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0028400 | RBH | 1.196730 | 3.488731 | 9.460806 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0027990 | RBH | 0.061658 | 0.289238 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0028480 | RBH | 4.237380 | 1.809937 | 11.559981 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0468400 | RBH | 11.879209 | 26.7710655 | 27.359151 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0027850 | RBH | 0.340661 | 0.234173 | 0.692426 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0452000 | RBH | 0.860369 | 2.9803035 | 2.7255425 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0028390 | RBH | 0.153788 | 0.185298 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0028440 | RBH | 0.972853 | 0.791662 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0028030 | RBH | 2.723677 | 6.419896 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0028690 | RBH | 0.203374 | 0.657310 | 2.168358 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0028310 | RBH | 0.121252 | 2.489928 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G028190 | RBH | 1.030676 | 1.154695 | 2.941664 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0028270 | RBH | 1.240951 | 17.683214 | 2.880507 |
