Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_06g0027380 | OGI:06081730 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr06:29866736-29869142 | ||||||||
| Gene Symbol | prx78, PRX78, OsPRX78, prx91 | ||||||||||
| DNA seq | acgcaacagctagctagctagcacgaagcagatagagtcgtcactgagcaagcaagcaagaagagtgatcgatcgatcgatcaatggcggcgagccttgctgggttggcattcctcgccgtcacgtcggccgcgctgctgtcgccgctcgccgtggttggccagctgaggacggactactactccaccatctgccccaacctggagaccatcgtccggagctccgtcaagcagtccatggccgcgtcaccgatctccgcgccggcgacgctcaggctcttcttccacgactgcgccgtcagggtacatctagagattgcaacagataatgatcgatcgaccgccatagatcgatgcaagcaatgtggtgatcagaatatcagatcagtagaagtaagcagtgatcactgcagtgtgtgatttcgattgcagggttgtgacgcgtcgatcatgatcgtgaactcgaacggcgacgacgagtggcggaactcagacaaccagtcgctgaagccggaggggttcacgacggtgctcaacgccaaggccgccgtcgacagcgatccacagtgccgctacaaggtgtcctgcgccgacatattggcgctcgccgcaagagaatccgtctaccaggttagcatagcaagaaattttacagcacttcgagataccaaaattttcagtttaaatttaagtgattttatagtttttaaggagataccatgttttctattttctactgttttttttagatgaaggcattacgcccagctttcactaaaaagcataagagttcatacattgaaaaaagaggaaaagcagtaaaaactagagaaactgttttaagcactcgggtggatgtccacccgtttcttgcatgtcatctaaatagttatggaaatttttttataaaattaacatgataggttaatatgtaatatatcatttcacaatactaagatatacggaaatttgcactaaaattttgttatcttttagtacttttaagaactgtagaatatatttgcaaattttcatatatcttataatattgaagatattgggagatactccttccatactcgtagaggaagtcgtttaggacagcaacacggtctccaaaacacaattttgacttcttatttctataaaaatatttattgaaaagtgatatatgtatacttttatgaaagtatttttcaagacaaatctatacatataattttaacattttgaaactcaacaacttaagagttattcatgatttatattttcagggtttgacttaaatattgtcctaaacgactttctttattctaggacggtaaactcactttagcatagcagattaaatttgcacacatgggcatgcatgcatgatgggtaaaaaaaattgatcgtgagatcgcgcgttcaacgctgtaactaatcctgcatggatgcatgcattggctggttggtgcagagcggagggcccaactaccaggtggagctggggagatacgacggcagggtgtcaaccagagacagcgtcgtgctgccgcatgccaacttcaacctggaccagctcaacgctttcttcgccggcctcggcctctcccagactgacatgatcgctctctcaggtactccaaaaatgtctaatcaactcaactcatcgtcgtcatcgtggactaaaaacttcacccgatagctgtacatccattgacgatccgatcgatcgatcgatcgatcttgtcacttgcccaacaattcatcaatctgcacaccttttccacacacgtacgtcgcttgcgattactccaatctgtgtgactgatcggtcgcgaattcgcatcgtcacttgcgcgtgaattcaggtgggcacacgttcggcgcggcggactgcaggttcttccagtacaggatcggcgccgacccggccatggaccagggcttcgcggcgcagctgcgcaacacctgcggcggcaaccccaacaacttcgcgttcctcaacggcgcgacgccggcggcgttcgacaacgcgtactaccggggcctgcagcaaggcagggggctcctcggctccgaccaggcgctgcacgccgaccagcggtcgcgcggcaccgtcgactactacgcgtggagccagagcgccttcttcggcgacttcgccgccgccatgaccaggctcgggagggtcggcgtcaagacggcggccaccggcggcgagatacgccgcgactgcagattcccgaattgatcggctaactcgcaccgtacgtgcgtgcacggtgcactactacttgtacatgcaaacattcaatcttgctcggttcatggacttcttactacagtacttagttgacgatgaacacgacgactgtcactgtaataattaatctcgatcaattcaataattcatacgtgat
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| CDS seq | atggcggcgagccttgctgggttggcattcctcgccgtcacgtcggccgcgctgctgtcgccgctcgccgtggttggccagctgaggacggactactactccaccatctgccccaacctggagaccatcgtccggagctccgtcaagcagtccatggccgcgtcaccgatctccgcgccggcgacgctcaggctcttcttccacgactgcgccgtcaggggttgtgacgcgtcgatcatgatcgtgaactcgaacggcgacgacgagtggcggaactcagacaaccagtcgctgaagccggaggggttcacgacggtgctcaacgccaaggccgccgtcgacagcgatccacagtgccgctacaagagcggagggcccaactaccaggtggagctggggagatacgacggcagggtgtcaaccagagacagcgtcgtgctgccgcatgccaacttcaacctggaccagctcaacgctttcttcgccggcctcggcctctcccagactgacatgatcgctctctcaggtgggcacacgttcggcgcggcggactgcaggttcttccagtacaggatcggcgccgacccggccatggaccagggcttcgcggcgcagctgcgcaacacctgcggcggcaaccccaacaacttcgcgttcctcaacggcgcgacgccggcggcgttcgacaacgcgtactaccggggcctgcagcaaggcagggggctcctcggctccgaccaggcgctgcacgccgaccagcggtcgcgcggcaccgtcgactactacgcgtggagccagagcgccttcttcggcgacttcgccgccgccatgaccaggctcgggagggtcggcgtcaagacggcggccaccggcggcgagatacgccgcgactgcagattcccgaattga
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| Protein seq | MAASLAGLAFLAVTSAALLSPLAVVGQLRTDYYSTICPNLETIVRSSVKQSMAASPISAPATLRLFFHDCAVRGCDASIMIVNSNGDDEWRNSDNQSLKPEGFTTVLNAKAAVDSDPQCRYKSGGPNYQVELGRYDGRVSTRDSVVLPHANFNLDQLNAFFAGLGLSQTDMIALSGGHTFGAADCRFFQYRIGADPAMDQGFAAQLRNTCGGNPNNFAFLNGATPAAFDNAYYRGLQQGRGLLGSDQALHADQRSRGTVDYYAWSQSAFFGDFAAAMTRLGRVGVKTAATGGEIRRDCRFPN |
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| Function | Peroxidase 45 [UniProtKB/Swiss-Prot:Q96522] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_06g0027380 | OsKeNa_06g0027380.01 | Chr06 | 29866819 | 29869063 | + | NAM | ||
| CDS seq | atggcggcgagccttgctgggttggcattcctcgccgtcacgtcggccgcgctgctgtcgccgctcgccgtggttggccagctgaggacggactactactccaccatctgccccaacctggagaccatcgtccggagctccgtcaagcagtccatggccgcgtcaccgatctccgcgccggcgacgctcaggctcttcttccacgactgcgccgtcaggggttgtgacgcgtcgatcatgatcgtgaactcgaacggcgacgacgagtggcggaactcagacaaccagtcgctgaagccggaggggttcacgacggtgctcaacgccaaggccgccgtcgacagcgatccacagtgccgctacaagagcggagggcccaactaccaggtggagctggggagatacgacggcagggtgtcaaccagagacagcgtcgtgctgccgcatgccaacttcaacctggaccagctcaacgctttcttcgccggcctcggcctctcccagactgacatgatcgctctctcaggtgggcacacgttcggcgcggcggactgcaggttcttccagtacaggatcggcgccgacccggccatggaccagggcttcgcggcgcagctgcgcaacacctgcggcggcaaccccaacaacttcgcgttcctcaacggcgcgacgccggcggcgttcgacaacgcgtactaccggggcctgcagcaaggcagggggctcctcggctccgaccaggcgctgcacgccgaccagcggtcgcgcggcaccgtcgactactacgcgtggagccagagcgccttcttcggcgacttcgccgccgccatgaccaggctcgggagggtcggcgtcaagacggcggccaccggcggcgagatacgccgcgactgcagattcccgaattga
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| Protein seq | MAASLAGLAFLAVTSAALLSPLAVVGQLRTDYYSTICPNLETIVRSSVKQSMAASPISAPATLRLFFHDCAVRGCDASIMIVNSNGDDEWRNSDNQSLKPEGFTTVLNAKAAVDSDPQCRYKSGGPNYQVELGRYDGRVSTRDSVVLPHANFNLDQLNAFFAGLGLSQTDMIALSGGHTFGAADCRFFQYRIGADPAMDQGFAAQLRNTCGGNPNNFAFLNGATPAAFDNAYYRGLQQGRGLLGSDQALHADQRSRGTVDYYAWSQSAFFGDFAAAMTRLGRVGVKTAATGGEIRRDCRFPN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_06g0027380 | OsKeNa_06g0027380.02 | Chr06 | 29866736 | 29869142 | + | IsoSeq | ||
| CDS seq | atgcaaacattcaatcttgctcggttcatggacttcttactacagtacttagttgacgatgaacacgacgactgtcactgtaat |
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| Protein seq | MQTFNLARFMDFLLQYLVDDEHDDCHCN |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr06 | 29867313 | 29868197 | + | OsKeNa_06g0027380.02 | OsKeNa_06g0027380.02,OsKeNa_06g0027380.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 1.552526 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0695400 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g48020 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0695400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0027590 | RBH | 0.0 | 0.0 | 4.292604 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0004970 | SBH | 0.0 | 0.000000 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0027530 | RBH | 0.0 | 0.0 | 2.502492 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0027100 | RBH | 0.0 | 0.094160 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0027610 | RBH | 0.0 | 0.0 | 0.728092 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0458100 | RBH | 0.072023 | 0.011346 | 1.786101 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0027000 | RBH | 0.0 | 0.346198 | 0.505319 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0440700 | RBH | 0.425594 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0027490 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0027560 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0027150 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0027800 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0027420 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G027330 | RBH | 0.0 | 0.000000 | 1.012185 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0027410 | RBH | 0.0 | 0.0 | 6.469568 |
