Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_06g0025990 | OGI:06078910 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr06:28811250-28815589 | ||||||||
| Gene Symbol | Y37, NAC11, ONAC011, ONAC11, OMTN4, OsY37, OsY37N, OsY37I, OsNAC1, DLN172, OsDLN172 | ||||||||||
| DNA seq | ctggcacgcgaaccaagaaaagtctctctctcctctcctctcttcttcatcaacacacactggttgaccaaccagctagctgatcgagttcgttgtttaccatcctattaATaccccttcctctctctcttctcccctcctgaatttctctcttggtagaggtagaattgatctcctttcttgttcttcttcgagttcttcttagttggagttcttggagcagcatcggtagtcgtcgtcttcgtcgatccagcatctcaaggaattcgaggaggagggggtgggcatgagcgggatgaattcgctgagcatggtggaggcgaggctgccgccggggttcaggttccacccgcgagacgacgagctcgtgctggactacctggaaaggaagctcctcgacggcggcgtgggcggcgccgcggcggcggtcaccatctacggctgcccggtgatggtcgacgtcgatctcaacaagtgcgagccatgggaccttcctggtaagacctagctataagctagctacagatcatagatcatcgagcttgcttgcttgcatccatgctactcatgtcgtggtgatcttgctcttctttctcgtcttccaccgcctctggatcatcatatgcgtgcttgttcatggccatgattggtttgagtttttttcttccagattctttctctctactgattgatctgctctgaaatgaattaattcgtgtgcttttttttgagggggaaaaattaaccgcgtgctgtttttcgtgtagtttttgtttaatttctctatagatcggtagctaggcttctcaaattaacaaccttttgatttgttctacctctaaaaacaaatcaccctatgattctatatttatatgatagaatcaataatggtatgatgatctgtttaaacagacaagtctttccatgtactagctagctaggacccagcagcctgcagaattctgtcagttttagaataagatcaactgatcattccacaattattagctgtttgtgcacacacgcatctaaggttgccaatcatgtgtttatctagctagctaacttgcagttggttctgcagaaatcagtacttgaattcaagatcttggtaacaactcatcttttctctctttttcttgatgtacaaaaagaacaagatcttggaaccaaccataacttctatctattccaagaaaattctctttgttcctttcctacatgcctccaatgtttttccttcaatgggcacagatatatactagtatagtagtagctaccttcttgatccaatcaattgcatccaaattgaaggtgatgcctgtccatgtatgcatgtcagttgatccttttctacagcaaaggtagccataactgaagtgatcatgacctcttctgcaactctcatatatagatcaagttgcatatttcaactatgcatacatgctagcttcccatacctcaagaatcatgccttctctttttctttagttcctcccccttttttgtcccctttttttggggtgtgcccatgcccttaatttgtttttagttattggaattatttttttttgccacaacatttaatgtttctctctgtttgtgtacatatagctgcaagctaaccgtttgaaaagtcttgagccaacgcaagaaatatcagatagtgagatcacatgccccaaattaaaatgcataaatttgtggggtggctaatgatttgtttgttacaaacaaaacagtccggcattttttaaattctgtttcaagtggaggctagctagctagcttgatcagatgattttcctgaaatctacaaacgagaacaaaattcacacgtcttgtctgcctccatcttgtcgccttctcctccccataacagaaggatattctcactgctatgagtttgtttggcctcttcttggccttctcctccttatctgtccctgttgctgccatgcaatcaaatattctcccactttgcctgatccttaaagggaattaacagccagtggatggggacaaacttaacaccaaaagaggccctctcactttgcctattagtagaatatagccaggaaatcatgtaaaaaggttataaattaaagaaaaatgtgtgctgaatgggataaatacgataattaattgattctatatagacctttcgaaaaaatagcaaatatgatgctgttcctagctagctcattgtacttttcctcctcatacccccccccccccctaaccctctcttctcgtatcttctcaacacgtacatgcatcaattgttaatgcaaattttctctatattaattgtgttgatttctcttgtacgtactttctagttgtctttcttacttagatggctatgctaataattagccaagtttgtgtttccatgtttatgagtaaattcatcattaggctaattaatggctttacAtttttctgaaattatatgttagtcttttgttgattgtttattttttcttgcattcagagatcgcttgcgttggcggcaaggagtggtacttctatagccttagggataggaagtatgcaactggccaacgaacaaatagagcaaccgaatcgggctactggaaggccacaggaaaagatcgcccaataagccggaaaggattgctcgtcggtatgcgaaaaaccctggtgttctacaaaggtagagcccctaaggggaagaagaccgagtgggtcatgcatgaattccgcaaagaaggacaaggggatccgatgaagttgcctctcaaggtacgtattatatttttaatacattcttaatttataaatataaatattattcctttgttggattctccatgtaaaatatccatttactagatgccaatcctttatttatgcacttatttgttgattcttgtatatattatatatgtatatgatgtctaaaatataatagactttgtacaagccaatcctttatttatgcacttatttgttgattcttgtatatattatatatgtatatgatgtctaaaatataatagactttgtacaagcgagaagtatcgggtttggtagtcagtatgaaataaagaattattaattaaataattaacttcatatgatatttattacacaagaaggagaccgactggaatgccaagttgttcttcatttgaataacacatatgcaatggataatggaatgacaactatctgtgtacatgtcctctcctgatctcataacttcatgattgaaaagtgagaaataccaaatttaagcatactttcatgataatttaggtgtcatatgaggaggtgaatatgctaagtatctcattttttatgattagaacatcatcgatacttaatatattgacatgatgttattagttaatgctaacgaggttcaattttaatttggaagttattctttacttccatgtcactctcatgccagctctaaatgagttatgttctcttctagatacacctcaatagatgcatgtgcaactattgactcagttctataaagcattcatgtctctttccaataatttcttaatgtgtgagatgctctctccaaacaattaatagaagagaattaaaacaaactacttatttatcataaatgtaatcttcatccaatgTttttatgtgaacaggaggactgggtcttgtgtagagtcttctacaagagtaggacaaccattgccaagctgccaacggagggtagctacaacaatattgacagtgtggccacaacttcactgcctcccctcactgacaactacattgcatttgatcagcctggttcaatgcaaaacctagagggttatgagcaagtgccctgcttctccaataatccctctcaacagccatcgtcgtcgatgaatgttccgttgacatcggccatggttgatcaagagcaaaacaatatgggtagggcgatcaaggatgtgctgagccaattcaccaagtttgaaggcaatgtgaagagggaggcccttcaaagtaatttttCccaggatggatttgattacttggctgagagtggcttcacacaaatgtggaactcactcagttgatttaatttcgaaggagatatatattgattgttgcgaattgaggaggaaactcttaaagtgtgcttatgtgctattgcatgtaattgtgatatagacgtatagtaccattctagttcacattatttgcAaaaaaaaaaggggtgatcaaaagagatattatcatcatcaatgatgtaaatacattatttgtgtactagggtgtgataaaaaaaattagtgcatgatgctaaaattaatggtatatatcaatagagctagaatcttctttta
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| CDS seq | atgagcgggatgaattcgctgagcatggtggaggcgaggctgccgccggggttcaggttccacccgcgagacgacgagctcgtgctggactacctggaaaggaagctcctcgacggcggcgtgggcggcgccgcggcggcggtcaccatctacggctgcccggtgatggtcgacgtcgatctcaacaagtgcgagccatgggaccttcctgagatcgcttgcgttggcggcaaggagtggtacttctatagccttagggataggaagtatgcaactggccaacgaacaaatagagcaaccgaatcgggctactggaaggccacaggaaaagatcgcccaataagccggaaaggattgctcgtcggtatgcgaaaaaccctggtgttctacaaaggtagagcccctaaggggaagaagaccgagtgggtcatgcatgaattccgcaaagaaggacaaggggatccgatgaagttgcctctcaaggaggactgggtcttgtgtagagtcttctacaagagtaggacaaccattgccaagctgccaacggagggtagctacaacaatattgacagtgtggccacaacttcactgcctcccctcactgacaactacattgcatttgatcagcctggttcaatgcaaaacctagagggttatgagcaagtgccctgcttctccaataatccctctcaacagccatcgtcgtcgatgaatgttccgttgacatcggccatggttgatcaagagcaaaacaatatgggtagggcgatcaaggatgtgctgagccaattcaccaagtttgaaggcaatgtgaagagggaggcccttcaaagtaatttttCccaggatggatttgattacttggctgagagtggcttcacacaaatgtggaactcactcagttga
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| Protein seq | MSGMNSLSMVEARLPPGFRFHPRDDELVLDYLERKLLDGGVGGAAAAVTIYGCPVMVDVDLNKCEPWDLPEIACVGGKEWYFYSLRDRKYATGQRTNRATESGYWKATGKDRPISRKGLLVGMRKTLVFYKGRAPKGKKTEWVMHEFRKEGQGDPMKLPLKEDWVLCRVFYKSRTTIAKLPTEGSYNNIDSVATTSLPPLTDNYIAFDQPGSMQNLEGYEQVPCFSNNPSQQPSSSMNVPLTSAMVDQEQNNMGRAIKDVLSQFTKFEGNVKREALQSNFSQDGFDYLAESGFTQMWNSLS |
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| Function | NAC domain-containing protein 21/22 [UniProtKB/Swiss-Prot:Q84TE6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_06g0025990 | OsKeNa_06g0025990.01 | Chr06 | 28811250 | 28815589 | + | NAM | ||
| CDS seq | atgagcgggatgaattcgctgagcatggtggaggcgaggctgccgccggggttcaggttccacccgcgagacgacgagctcgtgctggactacctggaaaggaagctcctcgacggcggcgtgggcggcgccgcggcggcggtcaccatctacggctgcccggtgatggtcgacgtcgatctcaacaagtgcgagccatgggaccttcctgagatcgcttgcgttggcggcaaggagtggtacttctatagccttagggataggaagtatgcaactggccaacgaacaaatagagcaaccgaatcgggctactggaaggccacaggaaaagatcgcccaataagccggaaaggattgctcgtcggtatgcgaaaaaccctggtgttctacaaaggtagagcccctaaggggaagaagaccgagtgggtcatgcatgaattccgcaaagaaggacaaggggatccgatgaagttgcctctcaaggaggactgggtcttgtgtagagtcttctacaagagtaggacaaccattgccaagctgccaacggagggtagctacaacaatattgacagtgtggccacaacttcactgcctcccctcactgacaactacattgcatttgatcagcctggttcaatgcaaaacctagagggttatgagcaagtgccctgcttctccaataatccctctcaacagccatcgtcgtcgatgaatgttccgttgacatcggccatggttgatcaagagcaaaacaatatgggtagggcgatcaaggatgtgctgagccaattcaccaagtttgaaggcaatgtgaagagggaggcccttcaaagtaatttttCccaggatggatttgattacttggctgagagtggcttcacacaaatgtggaactcactcagttga
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| Protein seq | MSGMNSLSMVEARLPPGFRFHPRDDELVLDYLERKLLDGGVGGAAAAVTIYGCPVMVDVDLNKCEPWDLPEIACVGGKEWYFYSLRDRKYATGQRTNRATESGYWKATGKDRPISRKGLLVGMRKTLVFYKGRAPKGKKTEWVMHEFRKEGQGDPMKLPLKEDWVLCRVFYKSRTTIAKLPTEGSYNNIDSVATTSLPPLTDNYIAFDQPGSMQNLEGYEQVPCFSNNPSQQPSSSMNVPLTSAMVDQEQNNMGRAIKDVLSQFTKFEGNVKREALQSNFSQDGFDYLAESGFTQMWNSLS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 3.172537 | 2.628064 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0675600 | RBH | 0.0 | 0.173630 | 3.488626 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g46270 | RBH | 0.0 | 0.114557 | 0.880935 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0675600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0026160 | RBH | 0.258470 | 14.925301 | 1.684306 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0005170 | RBH | 0.0 | 0.607733 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0026170 | RBH | 0.286494 | 16.673000 | 8.662124 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0025800 | RBH | 0.000000 | 0.360876 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0026250 | RBH | 0.716521 | 0.000000 | 5.743202 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0440100 | RBH | 2.1129975 | 9.820345 | 0.261605 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0025660 | RBH | 0.000000 | 1.273302 | 0.979207 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0422100 | RBH | 3.4666905 | 8.272469 | 0.342491 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0026100 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0026200 | RBH | 0.158020 | 4.172024 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0025820 | RBH | 0.0 | 57.844315 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0026470 | RBH | 0.0 | 1.422554 | 1.099345 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0026050 | RBH | 0.000000 | 8.966380 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G025960 | RBH | 0.000000 | 1.011132 | 2.124243 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0025990 | RBH | 0.0 | 16.046154 | 7.297279 |
