Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_05g0018680 | OGI:05058500 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr05:22090587-22097823 | ||||||||
| Gene Symbol | OsNek4 | ||||||||||
| DNA seq | atggtgtattagctagttgagtagctttgacatgcaccatgtatagccaagcacatatatataaaccgaaaaataactcgttgaaaaataagcataccaactaaaagtaatttattagtaaagcttttatgtttttatttttaatgacttaaaagatgatactgaaaaaatatatactaaaataaaaaattaactttcaaaacctaaattttagcttcgtctaacaagccaacaagcgaacaatggacatgagaccttaactccattgtgttagtcgcttggccgctaacatcatgtattaatgtagtattgtggcgttagaatacttagaataaatgtcatttttatcaatacgcttgatcgttctccaatgatacataattccttgttcatttgaatcgctcaacatttttaaacggaaaaaaaaagacaacgttggttcaccagggcgatatctccgtgcttttgttactcttctttgtttcacaacacccaattgtactccctccgtcccattttaaacacaaccattagttttcgtgtccaattttaatcgtgcatcttatttatttttttaaaaaaataagtcacgcataaagtattatttatgttttgtcaactaataacaataaaaatacaaataacaaaaagtttgaaataagatggacaatcgaaattggagacgatgttccattgaaaacaaattactaccgccgaatatgatatatcttagtgctaaaaatctaaacagagacatgtacaaattcgtaatattaaaatatgattctccttatatgacgattaatttgtgaaaagggaatactagttgaatttttttatggtacggagaaagtaaacaacggtaattagtggaagccacgctagcaaagccccgtcgaacccaatcgcgtccctcgatttttttttactgttttgcctttaggcttttaaccccagcccatcccgtcaccaccgctcgctgttgcggcgatgccacgccgtataaaagccaccgagcaaactacgtcgccaacaccaacaccgttaaagccaaatcaaatccaagaccagagccagcggggaggagggaaggaaggaaggagttgcccaagccgcgacgaccgcgagagctcgtcacctcgagggacgcgcccccccccccccccccccccccccgcgcgcgcgtcagcggggcggagatctcgccggaatcgaatcccgtgccgcccgccgccgacatcgccggtttctgccggaaacggaggagaagcgccgccgcgctgactggccaatgctggtggcggctggagaccctcgcggtaaggcgccccccctttgtcgtcgcgcgcggttggtgggaagcgaggaacactgtgcagcttgccggacggttgctgcttgcagaatcggcagatttgctgctactgttttgggtactgatattgcggtgacgctccctctgaggatgcgctagtttttattttttaaaattccaactagtagttcatcgattggcgtgttaaatcctttccttacgcaatggcgtctctccctacattgttttggatttgattggatgagttttgctttgattaaaagctgcttggcttatatgggagcttggcttatgtgagtgtttcgatgcctttgcagaaatcgccttggtgcagtggagtggaggtgtatgaggtcgcgctcggccagtaggaatgagattggtctgggtatctagggtggacttgctgctgtgaagctgtgattgttctgttagggatttggggcacatggagtcgcggatggatcagtacgagatcatggagcaggttggccggggcgcctttggtgctgcaatccttgtgaatcataagattgagaggaagaagtgagtggcatagttctattttattttcatctttttaacaacttgataacacttatgtttcctttcactaagatgaagagtttgattttgctgttaatattagtcaccatatatttatatatgttgtgttgcacaggtatgtgttgaagaaaatccggcttgcgaggcagacagagcgttgccgcaagtctgctcaccaagaggttagtggaatgtggaagtggaagcttgcaatccctaggctttgtttgttcggttgtttgctagtggtattattaggaatttgatcacgacgaaaacgaattgcagatggctctgattgctcggttgcaacacccttacattgttgaattcaaagaggcttgggttgagaaggtttgtggattaggaacttactatatctagcttatctggtttatacttatttagttgacatgggtcagtaatgcagggttgctatgtctgcattgtcacgggctattgtgaaggtggagatatgtgagtgagattatgttttagattagtttttcaaatgtcattttgtatattttgttgtatctcagttttctcttttatcacagggatgaattgatgaagaaattaaatggtacttacttcccagaggaggtatggaatgacttctttgtttttgtcagaatgaagggaaaaaggcatccaaatatgtgctaataatactgcatgtttctcagaaattgctgaaatggtttgctcaactggtattagccgtggactatttgcattcgaactatgtcttgcatcgggacctgaaggtaacttcagaacagataatatcattttctcttatttaattggtagatttcaatattcttgtcataattgcagtgctccaacatatttctcaccaaagatcaagatatacgcctaggttagttccttaataataaactactacaggtctggatggttccatattggtttatcaacttacacatattccttgcctttgcatgcaggagactttgggcttgctaagaccttaaaggaagatgatttaacttcttcggtatgttccttttcctatttctatggttggtctctggtaaaaaaaaaattgcatcaccttaattttccccacaatgataagagcattacatttattaagttttgtaagtttttaatcattgacactgtcagacacaccgatgcagtacatcatcaaagacactaaccatgctgttcatcatgtgcatattattcattgtttatagttatctcttttacacacatttatctgaatttgtaaaataggtgaagttattattatttttctatgctcaaactgacagcataatgctttctttaggttgttggaacaccgaattacatgtgtccagagcttctcacagatatcccttatggattcaagtcagacatctggtctcttggtaactgcctttttctcctcaggtcttctacaagttcatattactgcatatttatcttaatttaagttacgctttctatatagggtgctgtatgtatgagatggcagctcatcggcctgccttcaaggcttttgtaagctactgggctcttatcatatattcttgctttattatattgtaatatacaggtttagctttcatagggtcatatgagttacagttttatcttttcgtgtcacatgttttcaaaaaggttcttgccttatactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcatatcatttgattcattgttaaatataatttcatgtacacatatagttttacatatttcacaaatttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagtatatttttatcttgactttaatatttgataaactggaatattatggtggaagtagtataaatcattcctaactaactgtccggtttcacatctttatttaatttgaaaatgtttgttacagaaattatattacaaacaacaatgaaattttttaacttaaattaaatttattagtatgtaaaagtatgatgtttgaagatggtgctgaaaggaactttgggtcaggttacagaagcaaacaacctacggagtatagacctgccattgcccaccggtaattggtcaggttgaatcgactaaaaattcaataaatctattgggtgtaatgatgtaaaattgcaaccattacttgtacacgtgcaccttgatctttcaatatggtcttccgtaaaaacatgctactgaggcatttacatgtagactctaacgcaataatttggaatatattgtgttgtccacaataatcatagaaaagaaaagaacaaataaaactatataagtcaatacatctatttgaagtttgaactttgccaatagaaaatatggaacattggaattcttgtgtgctatttaacaatgctactatttgtatttgccttttaagtttcagtgatcttatgaatcaacaatacctgcaggatatggctggattaataagtaagataaataggtcctccattggccccttgcctgcctgttactcttcttctatgtaagtgcatttattgcatcgaagccacattttatttttatttttcatgcctaaaagtgatgttgtaagtaatttcaatgacaatagaagcaagtcatcgtcttattttttacaaccaagtaatgttttggcaggagatacataatagatgaaattggctaaaaccttaacacatttccattttaatgcaagtatacatgcttctaattgctgttgtgtacaggaaaactcttatcaaaagcatgttgagaaaaagtcctgagcatcgacctactgtaagttaccacagttcttgaaatagctttatttcttcatctggattctgaaaacacatgaaaaatcttgttaacaggcatctgagattctgaagaatccgtatctccaaccttatgttaatcaatgccgccctctttctgatgctccaactcccatacgcatgccagagaaaccattatccacttcacggagtaatcagagatgcacgtctgagagccaaagcagtagcatttcttgtagtgatatcgacagtacacaatcaagtgacagaagcacatcagggggcgctcctagcactgacagcaagcttaacgatatcagaagcatccaagatgcagaccgagctgattcagacgaaaaatgtgtaacaccagaagatcttagaggcaacaagaacatttctggtgctgaactgaaaagacaagattcctcaaaaagtgtacatcagcatcacaggggtgagagtaagcagccaaaaataattgagaagataatgacaactcttagagaggagagtaggcttagagaaaacaattctcctgtaagttctagtggtgtaaagttgacttctgcagttagcaataagaatcaagcagagcaatcatcagagagctcaaggcctcacagtggtgtttcatacagttcaaagtttggtgacatttcatctaatggatggaccaatacaagcgatgaatgtgtagatccagtccaggtgccattgcaattgaaacaactggtatgagcctatatttcttatcacaaaacgtccatttatttttcttcttctaataggttttgcttggttctggttttgcagtcaccaactgttgagcattgtccaaagttaaaaaattccgggtcctcaactcctgaacctgccaaacagattgcagaaaatggttcctcagcttcaggaatgagtaaaaccaagtcgtcacctagttctagtagacggcctagtcctcagagacaaacagtagcaggaattccaatcgtgccattcactgtgtcaaaacgagctcatatcaaggcagagagtgagaaaacaccgccgcgacctgcccatagcccaaataattctctacataatctccctcctttgataccgatatctacaaatctgtcagaagagaacatcaagctgggtaattctcaggcaatgccagctcctctggaattcgtgactgcagcatccaaggaggacatcagcttttactcaaattctgtagttgattgtgttgaaaaggccgagccatctgaagtatttgaatctaattctccagcctacctgactccaccgtggacaggcccagtgcttgatgccaaaggagagaatggcctaatagccataccatgttcagaaatacacactggcacattgcagaagagtatggctagtaatgatgattcaagcctgagctctccgttggatacattttatcttagttttgaacaagagtttgtctgcaaggatgattcgcaatccagcaagcatgggcacagtgctgtcacactactaagtggtgaggacaaatttactgtccaagaacttcttgcatcaacaccagttatttctccttttgtttcaagcacaagtaacactctgccagaggataaaagttcttaccagtcattcaagaaacaatcagattcacattcgggccctccagttgatgttcctgcacagactattagactcaacagtttccttgttagtgatgagtggccaacatcagaaacagttcaaggggaagctcgggacacggctgccagcaagcttctgaatgtagtaagagaagattttgatgtaagaagcagttcatgctcaacaagcacgcaaccttctggacaaaccccagttagatccaaactcaacgtgcctgaaactaatcttgccagtaacatatccataccatccatatcagaagcagtgagattatctaccgccatggacgttaaaccgtacacgtccgaggccagcaatggagtcaaggaggaggcatctcctgccaaggaagctcttgatgttacgtcatttaggcagcgagctgaggctctagaaggtctcttggagctttctgcggacttgctggaaaacaacaggttggaggaactcgccattgttctacagcctttcgggaagaacaaggtctccccgcgagagaccgcaatttggttggccagaagtttcaaaggaatgatgaacgaagaaggtggccgcctgtcgatgtgagtatctgtaaccttaaaaggcctttttattgctttcccctttgcttttttgagtagctcaaagtgggcttgatttgctgacagcgtgttgtgtttgtgttgcccggttttgttttttgtttcttttgattcaaaccattctttttggcgcatgttgtaaatagccaagacttgtaaacactaataaaatttgccttcagttctg
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| CDS seq | atggagtcgcggatggatcagtacgagatcatggagcaggttggccggggcgcctttggtgctgcaatccttgtgaatcataagattgagaggaagaagtatgtgttgaagaaaatccggcttgcgaggcagacagagcgttgccgcaagtctgctcaccaagagatggctctgattgctcggttgcaacacccttacattgttgaattcaaagaggcttgggttgagaagggttgctatgtctgcattgtcacgggctattgtgaaggtggagatatggatgaattgatgaagaaattaaatggtacttacttcccagaggagaaattgctgaaatggtttgctcaactggtattagccgtggactatttgcattcgaactatgtcttgcatcgggacctgaagtgctccaacatatttctcaccaaagatcaagatatacgcctaggagactttgggcttgctaagaccttaaaggaagatgatttaacttcttcggttgttggaacaccgaattacatgtgtccagagcttctcacagatatcccttatggattcaagtcagacatctggtctcttgggtgctgtatgtatgagatggcagctcatcggcctgccttcaaggcttttgatatggctggattaataagtaagataaataggtcctccattggccccttgcctgcctgttactcttcttctatgaaaactcttatcaaaagcatgttgagaaaaagtcctgagcatcgacctactgcatctgagattctgaagaatccgtatctccaaccttatgttaatcaatgccgccctctttctgatgctccaactcccatacgcatgccagagaaaccattatccacttcacggagtaatcagagatgcacgtctgagagccaaagcagtagcatttcttgtagtgatatcgacagtacacaatcaagtgacagaagcacatcagggggcgctcctagcactgacagcaagcttaacgatatcagaagcatccaagatgcagaccgagctgattcagacgaaaaatgtgtaacaccagaagatcttagaggcaacaagaacatttctggtgctgaactgaaaagacaagattcctcaaaaagtgtacatcagcatcacaggggtgagagtaagcagccaaaaataattgagaagataatgacaactcttagagaggagagtaggcttagagaaaacaattctcctgtaagttctagtggtgtaaagttgacttctgcagttagcaataagaatcaagcagagcaatcatcagagagctcaaggcctcacagtggtgtttcatacagttcaaagtttggtgacatttcatctaatggatggaccaatacaagcgatgaatgtgtagatccagtccaggtgccattgcaattgaaacaactgtcaccaactgttgagcattgtccaaagttaaaaaattccgggtcctcaactcctgaacctgccaaacagattgcagaaaatggttcctcagcttcaggaatgagtaaaaccaagtcgtcacctagttctagtagacggcctagtcctcagagacaaacagtagcaggaattccaatcgtgccattcactgtgtcaaaacgagctcatatcaaggcagagagtgagaaaacaccgccgcgacctgcccatagcccaaataattctctacataatctccctcctttgataccgatatctacaaatctgtcagaagagaacatcaagctgggtaattctcaggcaatgccagctcctctggaattcgtgactgcagcatccaaggaggacatcagcttttactcaaattctgtagttgattgtgttgaaaaggccgagccatctgaagtatttgaatctaattctccagcctacctgactccaccgtggacaggcccagtgcttgatgccaaaggagagaatggcctaatagccataccatgttcagaaatacacactggcacattgcagaagagtatggctagtaatgatgattcaagcctgagctctccgttggatacattttatcttagttttgaacaagagtttgtctgcaaggatgattcgcaatccagcaagcatgggcacagtgctgtcacactactaagtggtgaggacaaatttactgtccaagaacttcttgcatcaacaccagttatttctccttttgtttcaagcacaagtaacactctgccagaggataaaagttcttaccagtcattcaagaaacaatcagattcacattcgggccctccagttgatgttcctgcacagactattagactcaacagtttccttgttagtgatgagtggccaacatcagaaacagttcaaggggaagctcgggacacggctgccagcaagcttctgaatgtagtaagagaagattttgatgtaagaagcagttcatgctcaacaagcacgcaaccttctggacaaaccccagttagatccaaactcaacgtgcctgaaactaatcttgccagtaacatatccataccatccatatcagaagcagtgagattatctaccgccatggacgttaaaccgtacacgtccgaggccagcaatggagtcaaggaggaggcatctcctgccaaggaagctcttgatgttacgtcatttaggcagcgagctgaggctctagaaggtctcttggagctttctgcggacttgctggaaaacaacaggttggaggaactcgccattgttctacagcctttcgggaagaacaaggtctccccgcgagagaccgcaatttggttggccagaagtttcaaaggaatgatgaacgaagaaggtggccgcctgtcgatgtga
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| Protein seq | MESRMDQYEIMEQVGRGAFGAAILVNHKIERKKYVLKKIRLARQTERCRKSAHQEMALIARLQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMDELMKKLNGTYFPEEKLLKWFAQLVLAVDYLHSNYVLHRDLKCSNIFLTKDQDIRLGDFGLAKTLKEDDLTSSVVGTPNYMCPELLTDIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPACYSSSMKTLIKSMLRKSPEHRPTASEILKNPYLQPYVNQCRPLSDAPTPIRMPEKPLSTSRSNQRCTSESQSSSISCSDIDSTQSSDRSTSGGAPSTDSKLNDIRSIQDADRADSDEKCVTPEDLRGNKNISGAELKRQDSSKSVHQHHRGESKQPKIIEKIMTTLREESRLRENNSPVSSSGVKLTSAVSNKNQAEQSSESSRPHSGVSYSSKFGDISSNGWTNTSDECVDPVQVPLQLKQLSPTVEHCPKLKNSGSSTPEPAKQIAENGSSASGMSKTKSSPSSSRRPSPQRQTVAGIPIVPFTVSKRAHIKAESEKTPPRPAHSPNNSLHNLPPLIPISTNLSEENIKLGNSQAMPAPLEFVTAASKEDISFYSNSVVDCVEKAEPSEVFESNSPAYLTPPWTGPVLDAKGENGLIAIPCSEIHTGTLQKSMASNDDSSLSSPLDTFYLSFEQEFVCKDDSQSSKHGHSAVTLLSGEDKFTVQELLASTPVISPFVSSTSNTLPEDKSSYQSFKKQSDSHSGPPVDVPAQTIRLNSFLVSDEWPTSETVQGEARDTAASKLLNVVREDFDVRSSSCSTSTQPSGQTPVRSKLNVPETNLASNISIPSISEAVRLSTAMDVKPYTSEASNGVKEEASPAKEALDVTSFRQRAEALEGLLELSADLLENNRLEELAIVLQPFGKNKVSPRETAIWLARSFKGMMNEEGGRLSM |
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| Function | Serine/threonine-protein kinase Nek4 [UniProtKB/Swiss-Prot:Q60DG4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_05g0018680 | OsKeNa_05g0018680.02 | Chr05 | 22091845 | 22097823 | + | NAM | ||
| CDS seq | atggagtcgcggatggatcagtacgagatcatggagcaggttggccggggcgcctttggtgctgcaatccttgtgaatcataagattgagaggaagaagtatgtgttgaagaaaatccggcttgcgaggcagacagagcgttgccgcaagtctgctcaccaagagatggctctgattgctcggttgcaacacccttacattgttgaattcaaagaggcttgggttgagaagggttgctatgtctgcattgtcacgggctattgtgaaggtggagatatggatgaattgatgaagaaattaaatggtacttacttcccagaggagaaattgctgaaatggtttgctcaactggtattagccgtggactatttgcattcgaactatgtcttgcatcgggacctgaagtgctccaacatatttctcaccaaagatcaagatatacgcctaggagactttgggcttgctaagaccttaaaggaagatgatttaacttcttcggttgttggaacaccgaattacatgtgtccagagcttctcacagatatcccttatggattcaagtcagacatctggtctcttgggtgctgtatgtatgagatggcagctcatcggcctgccttcaaggcttttgatatggctggattaataagtaagataaataggtcctccattggccccttgcctgcctgttactcttcttctatgaaaactcttatcaaaagcatgttgagaaaaagtcctgagcatcgacctactgcatctgagattctgaagaatccgtatctccaaccttatgttaatcaatgccgccctctttctgatgctccaactcccatacgcatgccagagaaaccattatccacttcacggagtaatcagagatgcacgtctgagagccaaagcagtagcatttcttgtagtgatatcgacagtacacaatcaagtgacagaagcacatcagggggcgctcctagcactgacagcaagcttaacgatatcagaagcatccaagatgcagaccgagctgattcagacgaaaaatgtgtaacaccagaagatcttagaggcaacaagaacatttctggtgctgaactgaaaagacaagattcctcaaaaagtgtacatcagcatcacaggggtgagagtaagcagccaaaaataattgagaagataatgacaactcttagagaggagagtaggcttagagaaaacaattctcctgtaagttctagtggtgtaaagttgacttctgcagttagcaataagaatcaagcagagcaatcatcagagagctcaaggcctcacagtggtgtttcatacagttcaaagtttggtgacatttcatctaatggatggaccaatacaagcgatgaatgtgtagatccagtccaggtgccattgcaattgaaacaactgtcaccaactgttgagcattgtccaaagttaaaaaattccgggtcctcaactcctgaacctgccaaacagattgcagaaaatggttcctcagcttcaggaatgagtaaaaccaagtcgtcacctagttctagtagacggcctagtcctcagagacaaacagtagcaggaattccaatcgtgccattcactgtgtcaaaacgagctcatatcaaggcagagagtgagaaaacaccgccgcgacctgcccatagcccaaataattctctacataatctccctcctttgataccgatatctacaaatctgtcagaagagaacatcaagctgggtaattctcaggcaatgccagctcctctggaattcgtgactgcagcatccaaggaggacatcagcttttactcaaattctgtagttgattgtgttgaaaaggccgagccatctgaagtatttgaatctaattctccagcctacctgactccaccgtggacaggcccagtgcttgatgccaaaggagagaatggcctaatagccataccatgttcagaaatacacactggcacattgcagaagagtatggctagtaatgatgattcaagcctgagctctccgttggatacattttatcttagttttgaacaagagtttgtctgcaaggatgattcgcaatccagcaagcatgggcacagtgctgtcacactactaagtggtgaggacaaatttactgtccaagaacttcttgcatcaacaccagttatttctccttttgtttcaagcacaagtaacactctgccagaggataaaagttcttaccagtcattcaagaaacaatcagattcacattcgggccctccagttgatgttcctgcacagactattagactcaacagtttccttgttagtgatgagtggccaacatcagaaacagttcaaggggaagctcgggacacggctgccagcaagcttctgaatgtagtaagagaagattttgatgtaagaagcagttcatgctcaacaagcacgcaaccttctggacaaaccccagttagatccaaactcaacgtgcctgaaactaatcttgccagtaacatatccataccatccatatcagaagcagtgagattatctaccgccatggacgttaaaccgtacacgtccgaggccagcaatggagtcaaggaggaggcatctcctgccaaggaagctcttgatgttacgtcatttaggcagcgagctgaggctctagaaggtctcttggagctttctgcggacttgctggaaaacaacaggttggaggaactcgccattgttctacagcctttcgggaagaacaaggtctccccgcgagagaccgcaatttggttggccagaagtttcaaaggaatgatgaacgaagaaggtggccgcctgtcgatgtga
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| Protein seq | MESRMDQYEIMEQVGRGAFGAAILVNHKIERKKYVLKKIRLARQTERCRKSAHQEMALIARLQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMDELMKKLNGTYFPEEKLLKWFAQLVLAVDYLHSNYVLHRDLKCSNIFLTKDQDIRLGDFGLAKTLKEDDLTSSVVGTPNYMCPELLTDIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPACYSSSMKTLIKSMLRKSPEHRPTASEILKNPYLQPYVNQCRPLSDAPTPIRMPEKPLSTSRSNQRCTSESQSSSISCSDIDSTQSSDRSTSGGAPSTDSKLNDIRSIQDADRADSDEKCVTPEDLRGNKNISGAELKRQDSSKSVHQHHRGESKQPKIIEKIMTTLREESRLRENNSPVSSSGVKLTSAVSNKNQAEQSSESSRPHSGVSYSSKFGDISSNGWTNTSDECVDPVQVPLQLKQLSPTVEHCPKLKNSGSSTPEPAKQIAENGSSASGMSKTKSSPSSSRRPSPQRQTVAGIPIVPFTVSKRAHIKAESEKTPPRPAHSPNNSLHNLPPLIPISTNLSEENIKLGNSQAMPAPLEFVTAASKEDISFYSNSVVDCVEKAEPSEVFESNSPAYLTPPWTGPVLDAKGENGLIAIPCSEIHTGTLQKSMASNDDSSLSSPLDTFYLSFEQEFVCKDDSQSSKHGHSAVTLLSGEDKFTVQELLASTPVISPFVSSTSNTLPEDKSSYQSFKKQSDSHSGPPVDVPAQTIRLNSFLVSDEWPTSETVQGEARDTAASKLLNVVREDFDVRSSSCSTSTQPSGQTPVRSKLNVPETNLASNISIPSISEAVRLSTAMDVKPYTSEASNGVKEEASPAKEALDVTSFRQRAEALEGLLELSADLLENNRLEELAIVLQPFGKNKVSPRETAIWLARSFKGMMNEEGGRLSM
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_05g0018680 | OsKeNa_05g0018680.03 | Chr05 | 22092048 | 22097823 | + | NAM | ||
| CDS seq | atggagtcgcggatggatcagtacgagatcatggagcaggttggccggggcgcctttggtgctgcaatccttgtgaatcataagattgagaggaagaagtatgtgttgaagaaaatccggcttgcgaggcagacagagcgttgccgcaagtctgctcaccaagagatggctctgattgctcggttgcaacacccttacattgttgaattcaaagaggcttgggttgagaagggttgctatgtctgcattgtcacgggctattgtgaaggtggagatatggatgaattgatgaagaaattaaatggtacttacttcccagaggagaaattgctgaaatggtttgctcaactggtattagccgtggactatttgcattcgaactatgtcttgcatcgggacctgaagtgctccaacatatttctcaccaaagatcaagatatacgcctaggagactttgggcttgctaagaccttaaaggaagatgatttaacttcttcggttgttggaacaccgaattacatgtgtccagagcttctcacagatatcccttatggattcaagtcagacatctggtctcttgggtgctgtatgtatgagatggcagctcatcggcctgccttcaaggcttttgatatggctggattaataagtaagataaataggtcctccattggccccttgcctgcctgttactcttcttctatgaaaactcttatcaaaagcatgttgagaaaaagtcctgagcatcgacctactgcatctgagattctgaagaatccgtatctccaaccttatgttaatcaatgccgccctctttctgatgctccaactcccatacgcatgccagagaaaccattatccacttcacggagtaatcagagatgcacgtctgagagccaaagcagtagcatttcttgtagtgatatcgacagtacacaatcaagtgacagaagcacatcagggggcgctcctagcactgacagcaagcttaacgatatcagaagcatccaagatgcagaccgagctgattcagacgaaaaatgtgtaacaccagaagatcttagaggcaacaagaacatttctggtgctgaactgaaaagacaagattcctcaaaaagtgtacatcagcatcacaggggtgagagtaagcagccaaaaataattgagaagataatgacaactcttagagaggagagtaggcttagagaaaacaattctcctgtaagttctagtggtgtaaagttgacttctgcagttagcaataagaatcaagcagagcaatcatcagagagctcaaggcctcacagtggtgtttcatacagttcaaagtttggtgacatttcatctaatggatggaccaatacaagcgatgaatgtgtagatccagtccaggtgccattgcaattgaaacaactgtcaccaactgttgagcattgtccaaagttaaaaaattccgggtcctcaactcctgaacctgccaaacagattgcagaaaatggttcctcagcttcaggaatgagtaaaaccaagtcgtcacctagttctagtagacggcctagtcctcagagacaaacagtagcaggaattccaatcgtgccattcactgtgtcaaaacgagctcatatcaaggcagagagtgagaaaacaccgccgcgacctgcccatagcccaaataattctctacataatctccctcctttgataccgatatctacaaatctgtcagaagagaacatcaagctgggtaattctcaggcaatgccagctcctctggaattcgtgactgcagcatccaaggaggacatcagcttttactcaaattctgtagttgattgtgttgaaaaggccgagccatctgaagtatttgaatctaattctccagcctacctgactccaccgtggacaggcccagtgcttgatgccaaaggagagaatggcctaatagccataccatgttcagaaatacacactggcacattgcagaagagtatggctagtaatgatgattcaagcctgagctctccgttggatacattttatcttagttttgaacaagagtttgtctgcaaggatgattcgcaatccagcaagcatgggcacagtgctgtcacactactaagtggtgaggacaaatttactgtccaagaacttcttgcatcaacaccagttatttctccttttgtttcaagcacaagtaacactctgccagaggataaaagttcttaccagtcattcaagaaacaatcagattcacattcgggccctccagttgatgttcctgcacagactattagactcaacagtttccttgttagtgatgagtggccaacatcagaaacagttcaaggggaagctcgggacacggctgccagcaagcttctgaatgtagtaagagaagattttgatgtaagaagcagttcatgctcaacaagcacgcaaccttctggacaaaccccagttagatccaaactcaacgtgcctgaaactaatcttgccagtaacatatccataccatccatatcagaagcagtgagattatctaccgccatggacgttaaaccgtacacgtccgaggccagcaatggagtcaaggaggaggcatctcctgccaaggaagctcttgatgttacgtcatttaggcagcgagctgaggctctagaaggtctcttggagctttctgcggacttgctggaaaacaacaggttggaggaactcgccattgttctacagcctttcgggaagaacaaggtctccccgcgagagaccgcaatttggttggccagaagtttcaaaggaatgatgaacgaagaaggtggccgcctgtcgatgtga
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| Protein seq | MESRMDQYEIMEQVGRGAFGAAILVNHKIERKKYVLKKIRLARQTERCRKSAHQEMALIARLQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMDELMKKLNGTYFPEEKLLKWFAQLVLAVDYLHSNYVLHRDLKCSNIFLTKDQDIRLGDFGLAKTLKEDDLTSSVVGTPNYMCPELLTDIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPACYSSSMKTLIKSMLRKSPEHRPTASEILKNPYLQPYVNQCRPLSDAPTPIRMPEKPLSTSRSNQRCTSESQSSSISCSDIDSTQSSDRSTSGGAPSTDSKLNDIRSIQDADRADSDEKCVTPEDLRGNKNISGAELKRQDSSKSVHQHHRGESKQPKIIEKIMTTLREESRLRENNSPVSSSGVKLTSAVSNKNQAEQSSESSRPHSGVSYSSKFGDISSNGWTNTSDECVDPVQVPLQLKQLSPTVEHCPKLKNSGSSTPEPAKQIAENGSSASGMSKTKSSPSSSRRPSPQRQTVAGIPIVPFTVSKRAHIKAESEKTPPRPAHSPNNSLHNLPPLIPISTNLSEENIKLGNSQAMPAPLEFVTAASKEDISFYSNSVVDCVEKAEPSEVFESNSPAYLTPPWTGPVLDAKGENGLIAIPCSEIHTGTLQKSMASNDDSSLSSPLDTFYLSFEQEFVCKDDSQSSKHGHSAVTLLSGEDKFTVQELLASTPVISPFVSSTSNTLPEDKSSYQSFKKQSDSHSGPPVDVPAQTIRLNSFLVSDEWPTSETVQGEARDTAASKLLNVVREDFDVRSSSCSTSTQPSGQTPVRSKLNVPETNLASNISIPSISEAVRLSTAMDVKPYTSEASNGVKEEASPAKEALDVTSFRQRAEALEGLLELSADLLENNRLEELAIVLQPFGKNKVSPRETAIWLARSFKGMMNEEGGRLSM
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_05g0018680 | OsKeNa_05g0018680.01 | Chr05 | 22090587 | 22097823 | + | NAM | ||
| CDS seq | atggtgcttttaaccccagcccatcccgtcaccaccgctcgctgttgcggcgatgccacgccgtataaaagccaccgagcaaactacgtcgccaacaccaacaccgttaaagccaaatcaaatccaagaccagagccagcggggaggagggaaggaaggaaggagttgcccaagccgcgacgaccgcgagagctcgtcacctcgagggacgcgcccccccccccccccccccccccccgcgcgcgcgtcagcggggcggagatctcgccggaatcgaatcccgtgccgcccgccgccgacatcgccggtttctgccggaaacggaggagaagcgccgccgcgctgactggccaatgctggtggcggctggagaccctcgcgaaatcgccttggtgcagtggagtggaggtgtatgaggtcgcgctcggccagtag
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| Protein seq | MVLLTPAHPVTTARCCGDATPYKSHRANYVANTNTVKAKSNPRPEPAGRREGRKELPKPRRPRELVTSRDAPPPPPPPPRARVSGAEISPESNPVPPAADIAGFCRKRRRSAAALTGQCWWRLETLAKSPWCSGVEVYEVALGQ |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr05 | 22091905 | 22092240 | + | OsKeNa_05g0018680.02 | OsKeNa_05g0018680.01,OsKeNa_05g0018680.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.072416 | 10.188059 | 0.179545 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0440800 | RBH | 0.301075 | 0.388214 | 1.917196 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g36960 | RBH | 0.192873 | 0.247347 | 0.467518 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0440800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0018740 | RBH | 0.000000 | 16.947466 | 1.815041 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0040900 | RBH | 0.035468 | 24.984690 | 1.200551 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0018550 | RBH | 0.0 | 31.233253 | 0.357452 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0018570 | RBH | 0.021231 | 1.114338 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0018790 | RBH | 0.450964 | 29.705387 | 3.575870 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0332700 | RBH | 4.4785705 | 6.9003575 | 2.1799215 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0018310 | RBH | 0.024287 | 1.649969 | 0.292380 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0343800 | RBH | 4.738263 | 4.109347 | 8.2214575 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0018610 | RBH | 0.024663 | 0.339198 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0018550 | RBH | 0.054302 | 17.531584 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0018670 | RBH | 0.701321 | 50.741917 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0018740 | RBH | 0.236580 | 1.397931 | 0.463634 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0018740 | RBH | 0.104982 | 11.026230 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G018240 | RBH | 0.0 | 4.369856 | 0.691143 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0018540 | RBH | 0.0 | 18.941319 | 1.310745 |
