Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_05g0015390 | OGI:05050340 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr05:19040979-19049357 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gccagaacaaagcttaaatctttcaaagctactttgcatctcaatctacaattagcaccaaatattcttcatcatcatcacttagattttgcacctatatttgccaattaaaggaaaatcaggaagatcatagtctaaaattgatgcacttgcttatgcatttacaggacagattagccagctgccactaaccatttacataacttctgcttgaacactctacattccacacaagggaaatggaagaggaaagaatcgtgtaaaaagaatgcaagcccacatttttcaaacagcaggcccctcctcttctgggcctaaccaaaatatcatagccgcgtcagcacccatgctcaacggtgagagctttgagagctttgtagtgactgaccaagtcaaatttcttatgtcaatgatgtacatcattatcaatactgccaaccgatttgtcgactactcgaacattatactgctcgtatacccgtgcccgattctcttgccaccattgttctgcttgtgtctcgctgaaacgcttccggctgcattcagaacatagaattagtgagtatgcgccataacagaattagtgagtgtgaaaagtcgaacacagctccataacagtctaaagtagaaatcttcaactcatatagccagaacatttttgacccccaggaatatccaacctggttatcacttggtgtggcaccaattttaagtatacctcagtgagcccatgtgtcctctccttttccaactctctcgcttacatacccaagcccagcatgatctggacagccactccagcctaccttttacctgtctccagaaatggtgggcataatctcaaattcctgcaccatcaccaccaacaatctcctccaccatctccaacaatcacctacttgcccccgaaggatctgaaatgctggtgtgcccttctcacatccctgcaaggcacccactagcatcccattccaacatcttcacccccaaaatcgtccccacaactctacatcctggactatcatcaaggagcagatgggacgaggtctctactgcatccatgacatggcttgtggaagtgggagaacacaataatgccaaggagggcagaaaaatcaggcaaggcattttatttacctaaacctcactgaatgctgttacctatatctactcaatgctagatgctaaatcaagtcaaatcgagttggatggctctgtgtcgtggacagggtgctacatcaactcaaacaggacaggattgatttgaggcggtcacatgatctggttttgcaagttgaaggttctatttagacaggtctgttgtcaatagttattatcaaattattgtaatattcattgcattcttgatctgcacatatatagagtaagttaatagtggttttgtgtatcaagatcctctcaactagaggctactgcccacttcatgttgttctctccataaaaaaagagtaaacacttaaaaccccaaatatctatataggacaagcaaaaaataagttgattatactatatagtaagccaaataaatggaatgcccaaaagtgtcaatcactcaattgctgtcattgcttgttagatctagtctcatagactactcgccaaacgaataatgtactatgttcaagattgatagacaagatttttgctgactaatgactatatattttgcctctgtgtggttggtgtgtacctgaaccggaccctcttgagatctcgagtccctccaggtagggcagtaagagtgatatacacccctggttcatcttgctctacccattcagattcatgcttagaatctgaatcgggtagccttgttccattcttgggaatttcagggtgactcaacttatttctaactgaagttggtccattggaaacaagcaaaccattagaaccgtttgaacagggttctccagaacttcttgggctacccaaactctcagatgcaactgatatatcagttggaatagaaattcctggcagcggtggcagtctgctgttcttcaccagtcctgctccttcaggtagcttctctgccatgcccttcaactattacacgaacaaagaattgttagtgaaaatattcaacatattgtacaaaatcattatttgaatttgaagatgatcatgcattcttagtttcttaaatacaaagttaagatccaaataatgtcatttttagttttccactttccaactccactaaagcagcagactgtcttctatcaaaagtaatgcatgcacatttagtagtcatagactcgaaacctagaaaagttgtactcatcagggccagttagaaggcaccatgctgcctttgaccaatccacagttcccttggttttgacttttgagccattcagttttaatcaaggggatccgtttacacatacttgcagttttttactttgttagtttactaatgtctgtacagtagacatcctacttgaagtatagcaatcttacctgtgcagttaatgatttgataacttcctttgcagctttgcacttcgcagtttcctcccctgcaattgaaatagcttccttcaactgtttagttgttctctccaaatcagcttccagtagctgagacttgcgagtaagattttccacctgagatattaagattgttagagaatgcattgttgagcatgatctcaccttaaacaaatggggagtttaatgatctatctttccaatgcttgaataaggcagtcaaaatattaagtaggtgaaaaacaactagtgggtcccaaaaagatagatggttcgcgtccatgaatagtcacaactcacaaggtaataagattaataaaatcagaagaaaaacaggactgcatacaaaaaccagcaaatttgccatgttcgcacaagatattttgatttccattcaggtgtccaaagattaacaaatgatgctcaatattcaattaagttacatgcctacaatttactgaaggagaatacaaattagaaaggtaactggataaagaatatagtaagatatgtacctgagacctcaaacttagaacctcttggcttatgctatcatttggcttcacaccatccaccactctaggagaggttagaccacccaaagtaggtgttggagttgtggatcgaggagggcttgctcttcttgaaacaggtgatgttgcccttgaaacaattctagatccaggaactgatgctgaaaaaaatttctttgatgaaccaaaggattttgagatgttgagcccactccaatgagaactgccatttggaataggggaaacacgactgctattgaactcaaacttcttgtttttcttcgaagttctgctatccatgtgcttgaaggattccaatgatgacaatctcgacaactgggcatttgattttgtctccaactcctcgtcaacagaatcattgaacccctgtataacagatccccgctttgctgaagaatatctatctgtctcaggacccttattcagcttgctgtagcagctatcacatacgcgataaggcttgtttgggtttggtgctaatgaagctttcagagatttcttactgctgcaggcatgacaaaatacaagtgcacaattgtagcaattatgacgttttctccttagattaaatggcaaccgacacccagaacacatggactgatcaactccagaaacccacttgtgaatgcatattgctgcagtgaagttaatcccgcaaacaacagttctgacttgcttatctttcagagcttcaaccaaagtaggagaactcctatcgtccgtatctccatgtcctaaccgaccattcgcacctttaccccatgtgtacacctcagtccttgaagtcaagacagcgacatgataagcaccacatgagatctcctccacaaagtttttatgtagcttcccttcaacacgcacaggaagcatgccatctgcttgtggatttccaagctggccatagacaggacttcccattgtatatacatgcccagaggtagtcagcgccaccgtcatacagtgaccacaagctatttgacaaaagttaggctcgaccaaagcagctacacatgttgggacaagtcttgtatctttgtcaccatgtcctaaacggcctttatcaccatcaccccatgtaaaaatcttaccagaagaacagttgctagaactagaattgccgaccataacttcaacaacagcagcagtgtgccaaacaccacaagctgctcgaacagtccgtagccctttaagggattccacttctctagggactgaaagactctgtcgatctccatgacctagaactccaaaagatccatctccaaatgtgaatagctgtcctgcagaagttactatagccgtgtgccaggggccacatgaaattgctgaaacatgtatgccctctaatggtccattgacccttttgggtacccagtgactgacttcattcccgtggcctaaaagcccagaattggaagtaccatttccccaagtgtacagatccccagagagcgtaactgcacaagtgtggtactcaccacatgctactagctcaatgttcatattagcaagagcatcaataagctttggctggggcacatcacaatctacaccatgaccaagacgtccgcctgattcctcaccccaagagtagatctctccctgcttggtaacaagtgtggcatgccttcccccacaagaaatgttctgtacatcaagttttacagcaaattccaatggctttggtataagacaatccatgtttacacctgaggagttcccaactctcgaattgccaccaccaagaatcccctccccagtcccctctccccatatgaaaacatcacctagggcatcaccatcatcatgaccagaaccatgacttgatgaactaacagcactggataaactaacacggaaagcatccattgggatgccccttgagtgtaaatttgtgttatctgactgcccagaagacacggaatggacagaaccggcattagaatccgatgggaagaagggcttgggtggggctgcatatgacacaatgtcagaaaatgccttctccagaccgacctttggtgggctcccaaatggactacgaagtcggtaattttcaacaccatcctgttgcaggacaattatcaagatgtttgttatattaattgaagtagacagaagaataaaataaaacatggtcagtaagatacaattcttattgtggtgctgcaaagcgataaatatctatgtaatgagattgtacagaccatacagaacaaagagaacagcctaggtacgacataagacttttgccatgttgttcagatcttaaagcagcaggccaaaaccaaaaaatggaaaagaaaaaagatggaacatacaaaacaggaagagattgggtagttctgtataggtgacgaacacacaatatagtggcatagtgggatgagctgggtgggtagtgggaaataccttgtggacactgtcattgctgctgaaaggagaactcaatggggagcttcgtcttgtgtaagttctgggactagttgtaccagaggaaagcatatcacttctcgattctgttctccatttcctttgatgactacgtgttatgagggtttttagcccagcaaaccacacttcggcttcatctttatccttgcatatctgatatcatgataaaaccacatcaccaaacaaaatcaatttgctaccgaggaaaggggtttagtgtgcatcaaaaatggaaatcgaaccaagaagataaacagcacatataaaatgaacagtatataacttacaatgtccaatgatctatcatgagatatgagagaaaatgactggcattccttttctggtcgtggatacctctgaaaaattgcctgcattggcaaaagagaaacagacattgttaggggagagttacagaccttaaatatagttgaatactcccttgtgaatcgttttccatcagaaagcgaatgtaaaaaaaaaaaaacaacatgatgggacagatcaatttgtaactgccatatgtagctccttttctggaggcagtggcaaaagagaatcataaatgaaccatcagaagttgcatcagtttgaagtggtatgtaatttgttgttatgggggcaagactaatgattacagctatctcctaatggcataagttgtatcagtagtagatatcagaaatttgaactgtaaaagttcttgtcagttgtcagtaagaatgcaacgaaactcctcttaaggagggagaattatgttagggtaaaagctgaagagacacccacagatgtattcataaggagttaacgccaaaacaaacaagcaaaagaaatacactgttgttttaccagatatgatatgagatttgatcacaatggccaattagacttagagaaatctatattcctgaaatttgaagttttccagaaatggtaactcaccgttcgttgtccaggaattattctggacacatgactcaacctcagctgtttttcctctttcccggaaaaccatatcaatatagattcatcctgaatgaacaaaaacaccatgaatgtccataaatctgaagggtaaacaaagagggctttacaactcagtgagagaaaatgcaaacaaaactcacattggaaagcctaaatgggcaaaattttggcttccctctgcgcccgtacttcagcaagtatgctcctttcttgagagcagtgatggcctgagaaacagtggaatgttgtatcgagcatcagtagttagtatcacactactatcctagtaaaataataaaactaggtcaagaaataactctgattttagatgccacaaaggagaggcattaaatacaatggaacaatcacatgcattctaattggccatcgacatgttctttcagacaatttgaaactacttcagagctggaaatgaacattatattatgtatagcactataaactaatcggttaatactggagatgatgaaaatagcgttccagctattacatggagaagtgaattactaaagcaaactccctaatgcacaagagatgaaatgctacatgttacagcaaatgcaaaggtctcatcaataatctctgaaacaattatcatctttcgaaataagggattctcctagaagggtagcacatataggctattctctttgaggtaaaccataactcagaacttcattaaaattattcattgtgccatgtgagcacagagagaacaaaatggaaactcaaaaaaatgggcaaagaattttacaagttcattcaaggagaaagtatctgtcagaaattactgcagagaagacgtgtattgatccaattaacacactggcacttcccctcaaagcaataggacataactaatatagcagtatagctcaactcaatcaattaccgcacgcagcattaaccaacagcaaaagaaggttgggaaaccgttatagcataccactcccaactcaatcatacaacctgcacgagagcaaagtagtaacaaccagcaaacagcccaattcgattggccttccccaaaaaaaaagttagcaaacacaatcactgtagccaaatcaatgtctctggaattatccaacccaagaggccaaataacagtaattaaatcggcttccaccacagaaccctacttgcaggcagcagcaaagccgaggctccagactccccaaaattttggtttctccgcgggggacacgcagagctactgctgcggtagcagaattcagcagccgcacgaaaacgcacaaacgcaaagcaaatgcatctaccatccagagacgccttccccgccacgcgcggccccgagacgaggaacacaccgacagccgggatttcctcggcattcccaagccgagctaagcggaggatcgggaagcggctcacctgctcgatgtcgcgctccacggccccgggccgcgcgccgccgagatccgacgacgcgtccgacatcgccgccccccccccccccccgcctcctctggccgcgcgcgtgccgccgccgccgcctcaccgcctcaccaccgcccttctcctcctcctccctggacccaccgcccgccacatcccggcatccccctcccaatggcacgggaccccgttcccgccccccctcggggagagcgcgcgcgcgcacaaaaaaaaatctccgcggcggcgcggcggaagcgcgcgacgggctgggcggccgctggtggccgaagcgagggggggaatcgggggggtttgcgctgcgtgggggggggggtggagagaccaccagagcgcgcgcgagagagatgtggagatcgagggctcgagggcgaggggggagagagagagagagagaggaatggtgcgaggt
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| CDS seq | atgtcggacgcgtcgtcggatctcggcggcgcgcggcccggggccgtggagcgcgacatcgagcaggccatcactgctctcaagaaaggagcatacttgctgaagtacgggcgcagagggaagccaaaattttgcccatttaggctttccaatgatgaatctatattgatatggttttccgggaaagaggaaaaacagctgaggttgagtcatgtgtccagaataattcctggacaacgaacggcaatttttcagaggtatccacgaccagaaaaggaatgccagtcattttctctcatatctcatgatagatcattggacattatatgcaaggataaagatgaagccgaagtgtggtttgctgggctaaaaaccctcataacacgtagtcatcaaaggaaatggagaacagaatcgagaagtgatatgctttcctctggtacaactagtcccagaacttacacaagacgaagctccccattgagttctcctttcagcagcaatgacagtgtccacaaggatggtgttgaaaattaccgacttcgtagtccatttgggagcccaccaaaggtcggtctggagaaggcattttctgacattgtgtcatatgcagccccacccaagcccttcttcccatcggattctaatgccggttctgtccattccgtgtcttctgggcagtcagataacacaaatttacactcaaggggcatcccaatggatgctttccgtgttagtttatccagtgctgttagttcatcaagtcatggttctggtcatgatgatggtgatgccctaggtgatgttttcatatggggagaggggactggggaggggattcttggtggtggcaattcgagagttgggaactcctcaggtgtaaacatggattgtcttataccaaagccattggaatttgctgtaaaacttgatgtacagaacatttcttgtgggggaaggcatgccacacttgttaccaagcagggagagatctactcttggggtgaggaatcaggcggacgtcttggtcatggtgtagattgtgatgtgccccagccaaagcttattgatgctcttgctaatatgaacattgagctagtagcatgtggtgagtaccacacttgtgcagttacgctctctggggatctgtacacttggggaaatggtacttccaattctgggcttttaggccacgggaatgaagtcagtcactgggtacccaaaagggtcaatggaccattagagggcatacatgtttcagcaatttcatgtggcccctggcacacggctatagtaacttctgcaggacagctattcacatttggagatggatcttttggagttctaggtcatggagatcgacagagtctttcagtccctagagaagtggaatcccttaaagggctacggactgttcgagcagcttgtggtgtttggcacactgctgctgttgttgaagttatggtcggcaattctagttctagcaactgttcttctggtaagatttttacatggggtgatggtgataaaggccgtttaggacatggtgacaaagatacaagacttgtcccaacatgtgtagctgctttggtcgagcctaacttttgtcaaatagcttgtggtcactgtatgacggtggcgctgactacctctgggcatgtatatacaatgggaagtcctgtctatggccagcttggaaatccacaagcagatggcatgcttcctgtgcgtgttgaagggaagctacataaaaactttgtggaggagatctcatgtggtgcttatcatgtcgctgtcttgacttcaaggactgaggtgtacacatggggtaaaggtgcgaatggtcggttaggacatggagatacggacgataggagttctcctactttggttgaagctctgaaagataagcaagtcagaactgttgtttgcgggattaacttcactgcagcaatatgcattcacaagtgggtttctggagttgatcagtccatgtgttctgggtgtcggttgccatttaatctaaggagaaaacgtcataattgctacaattgtgcacttgtattttgtcatgcctgcagcagtaagaaatctctgaaagcttcattagcaccaaacccaaacaagccttatcgcgtatgtgatagctgctacagcaagctgaataagggtcctgagacagatagatattcttcagcaaagcggggatctgttatacaggggttcaatgattctgttgacgaggagttggagacaaaatcaaatgcccagttgtcgagattgtcatcattggaatccttcaagcacatggatagcagaacttcgaagaaaaacaagaagtttgagttcaatagcagtcgtgtttcccctattccaaatggcagttctcattggagtgggctcaacatctcaaaatcctttggttcatcaaagaaatttttttcagcatcagttcctggatctagaattgtttcaagggcaacatcacctgtttcaagaagagcaagccctcctcgatccacaactccaacacctactttgggtggtctaacctctcctagagtggtggatggtgtgaagccaaatgatagcataagccaagaggttctaagtttgaggtctcaggtggaaaatcttactcgcaagtctcagctactggaagctgatttggagagaacaactaaacagttgaaggaagctatttcaattgcaggggaggaaactgcgaagtgcaaagctgcaaaggaagttatcaaatcattaactgcacagttgaagggcatggcagagaagctacctgaaggagcaggactggtgaagaacagcagactgccaccgctgccaggaatttctattccaactgatatatcagttgcatctgagagtttgggtagcccaagaagttctggagaaccctgttcaaacggttctaatggtttgcttgtttccaatggaccaacttcagttagaaataagttgagtcaccctgaaattcccaagaatggaacaaggctacccgattcagattctaagcatgaatctgaatgggtagagcaagatgaaccaggggtgtatatcactcttactgccctacctggagggactcgagatctcaagagggtccggttcagccggaagcgtttcagcgagacacaagcagaacaatggtggcaagagaatcgggcacgggtatacgagcagtataatgttcgagtagtcgacaaatcggttggcagtattgataatgatgtacatcat
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| Protein seq | MSDASSDLGGARPGAVERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESILIWFSGKEEKQLRLSHVSRIIPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLITRSHQRKWRTESRSDMLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKDGVENYRLRSPFGSPPKVGLEKAFSDIVSYAAPPKPFFPSDSNAGSVHSVSSGQSDNTNLHSRGIPMDAFRVSLSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGNSRVGNSSGVNMDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKKSLKASLAPNPNKPYRVCDSCYSKLNKGPETDRYSSAKRGSVIQGFNDSVDEELETKSNAQLSRLSSLESFKHMDSRTSKKNKKFEFNSSRVSPIPNGSSHWSGLNISKSFGSSKKFFSASVPGSRIVSRATSPVSRRASPPRSTTPTPTLGGLTSPRVVDGVKPNDSISQEVLSLRSQVENLTRKSQLLEADLERTTKQLKEAISIAGEETAKCKAAKEVIKSLTAQLKGMAEKLPEGAGLVKNSRLPPLPGISIPTDISVASESLGSPRSSGEPCSNGSNGLLVSNGPTSVRNKLSHPEIPKNGTRLPDSDSKHESEWVEQDEPGVYITLTALPGGTRDLKRVRFSRKRFSETQAEQWWQENRARVYEQYNVRVVDKSVGSIDNDVHH |
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| Function | PH, RCC1 and FYVE domains-containing protein 1 [UniProtKB/Swiss-Prot:Q947D2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_05g0015390 | OsKeNa_05g0015390.01 | Chr05 | 19040989 | 19049357 | - | NAM | ||
| CDS seq | atgtcggacgcgtcgtcggatctcggcggcgcgcggcccggggccgtggagcgcgacatcgagcaggccatcactgctctcaagaaaggagcatacttgctgaagtacgggcgcagagggaagccaaaattttgcccatttaggctttccaatgatgaatctatattgatatggttttccgggaaagaggaaaaacagctgaggttgagtcatgtgtccagaataattcctggacaacgaacggcaatttttcagaggtatccacgaccagaaaaggaatgccagtcattttctctcatatctcatgatagatcattggacattatatgcaaggataaagatgaagccgaagtgtggtttgctgggctaaaaaccctcataacacgtagtcatcaaaggaaatggagaacagaatcgagaagtgatatgctttcctctggtacaactagtcccagaacttacacaagacgaagctccccattgagttctcctttcagcagcaatgacagtgtccacaaggatggtgttgaaaattaccgacttcgtagtccatttgggagcccaccaaaggtcggtctggagaaggcattttctgacattgtgtcatatgcagccccacccaagcccttcttcccatcggattctaatgccggttctgtccattccgtgtcttctgggcagtcagataacacaaatttacactcaaggggcatcccaatggatgctttccgtgttagtttatccagtgctgttagttcatcaagtcatggttctggtcatgatgatggtgatgccctaggtgatgttttcatatggggagaggggactggggaggggattcttggtggtggcaattcgagagttgggaactcctcaggtgtaaacatggattgtcttataccaaagccattggaatttgctgtaaaacttgatgtacagaacatttcttgtgggggaaggcatgccacacttgttaccaagcagggagagatctactcttggggtgaggaatcaggcggacgtcttggtcatggtgtagattgtgatgtgccccagccaaagcttattgatgctcttgctaatatgaacattgagctagtagcatgtggtgagtaccacacttgtgcagttacgctctctggggatctgtacacttggggaaatggtacttccaattctgggcttttaggccacgggaatgaagtcagtcactgggtacccaaaagggtcaatggaccattagagggcatacatgtttcagcaatttcatgtggcccctggcacacggctatagtaacttctgcaggacagctattcacatttggagatggatcttttggagttctaggtcatggagatcgacagagtctttcagtccctagagaagtggaatcccttaaagggctacggactgttcgagcagcttgtggtgtttggcacactgctgctgttgttgaagttatggtcggcaattctagttctagcaactgttcttctggtaagatttttacatggggtgatggtgataaaggccgtttaggacatggtgacaaagatacaagacttgtcccaacatgtgtagctgctttggtcgagcctaacttttgtcaaatagcttgtggtcactgtatgacggtggcgctgactacctctgggcatgtatatacaatgggaagtcctgtctatggccagcttggaaatccacaagcagatggcatgcttcctgtgcgtgttgaagggaagctacataaaaactttgtggaggagatctcatgtggtgcttatcatgtcgctgtcttgacttcaaggactgaggtgtacacatggggtaaaggtgcgaatggtcggttaggacatggagatacggacgataggagttctcctactttggttgaagctctgaaagataagcaagtcagaactgttgtttgcgggattaacttcactgcagcaatatgcattcacaagtgggtttctggagttgatcagtccatgtgttctgggtgtcggttgccatttaatctaaggagaaaacgtcataattgctacaattgtgcacttgtattttgtcatgcctgcagcagtaagaaatctctgaaagcttcattagcaccaaacccaaacaagccttatcgcgtatgtgatagctgctacagcaagctgaataagggtcctgagacagatagatattcttcagcaaagcggggatctgttatacaggggttcaatgattctgttgacgaggagttggagacaaaatcaaatgcccagttgtcgagattgtcatcattggaatccttcaagcacatggatagcagaacttcgaagaaaaacaagaagtttgagttcaatagcagtcgtgtttcccctattccaaatggcagttctcattggagtgggctcaacatctcaaaatcctttggttcatcaaagaaatttttttcagcatcagttcctggatctagaattgtttcaagggcaacatcacctgtttcaagaagagcaagccctcctcgatccacaactccaacacctactttgggtggtctaacctctcctagagtggtggatggtgtgaagccaaatgatagcataagccaagaggttctaagtttgaggtctcaggtggaaaatcttactcgcaagtctcagctactggaagctgatttggagagaacaactaaacagttgaaggaagctatttcaattgcaggggaggaaactgcgaagtgcaaagctgcaaaggaagttatcaaatcattaactgcacagttgaagggcatggcagagaagctacctgaaggagcaggactggtgaagaacagcagactgccaccgctgccaggaatttctattccaactgatatatcagttgcatctgagagtttgggtagcccaagaagttctggagaaccctgttcaaacggttctaatggtttgcttgtttccaatggaccaacttcagttagaaataagttgagtcaccctgaaattcccaagaatggaacaaggctacccgattcagattctaagcatgaatctgaatgggtagagcaagatgaaccaggggtgtatatcactcttactgccctacctggagggactcgagatctcaagagggtccggttcagccggaagcgtttcagcgagacacaagcagaacaatggtggcaagagaatcgggcacgggtatacgagcagtataatgttcgagtagtcgacaaatcggttggcagtattgataatgatgtacatcat
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| Protein seq | MSDASSDLGGARPGAVERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESILIWFSGKEEKQLRLSHVSRIIPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLITRSHQRKWRTESRSDMLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKDGVENYRLRSPFGSPPKVGLEKAFSDIVSYAAPPKPFFPSDSNAGSVHSVSSGQSDNTNLHSRGIPMDAFRVSLSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGNSRVGNSSGVNMDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKKSLKASLAPNPNKPYRVCDSCYSKLNKGPETDRYSSAKRGSVIQGFNDSVDEELETKSNAQLSRLSSLESFKHMDSRTSKKNKKFEFNSSRVSPIPNGSSHWSGLNISKSFGSSKKFFSASVPGSRIVSRATSPVSRRASPPRSTTPTPTLGGLTSPRVVDGVKPNDSISQEVLSLRSQVENLTRKSQLLEADLERTTKQLKEAISIAGEETAKCKAAKEVIKSLTAQLKGMAEKLPEGAGLVKNSRLPPLPGISIPTDISVASESLGSPRSSGEPCSNGSNGLLVSNGPTSVRNKLSHPEIPKNGTRLPDSDSKHESEWVEQDEPGVYITLTALPGGTRDLKRVRFSRKRFSETQAEQWWQENRARVYEQYNVRVVDKSVGSIDNDVHH
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_05g0015390 | OsKeNa_05g0015390.02 | Chr05 | 19040979 | 19041130 | - | IsoSeq | ||
| CDS seq | agtgcatcaattttagactatgatcttcctgattttcctttaattggcaaatataggtgcaaa |
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| Protein seq | SASILDYDLPDFPLIGKYRCK |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.742402 | 4.677262 | 10.975645 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0384800 | RBH | 4.760975 | 3.943932 | 5.144959 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g31920 | RBH | 3.219619 | 2.652623 | 1.324413 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0384800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0015390 | RBH | 0.722873 | 12.926501 | 11.893919 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0046760 | RBH | 0.155985 | 3.328339 | 4.663757 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0015230 | RBH | 1.925614 | 10.918007 | 14.776977 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0015260 | RBH | 0.346806 | 0.415538 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0015430 | RBH | 7.155133 | 15.759291 | 22.592590 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0284900 | RBH | 9.2779355 | 17.3480855 | 18.154112 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0015030 | RBH | 0.325138 | 0.672671 | 1.872944 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0295700 | RBH | 15.0248765 | 16.573044 | 28.13276 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0015230 | RBH | 0.539590 | 0.341956 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0015270 | RBH | 0.893241 | 16.016764 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0015270 | RBH | 3.256891 | 18.303663 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0015330 | RBH | 1.262773 | 1.126010 | 2.501677 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0015400 | RBH | 0.244897 | 6.660075 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G014900 | RBH | 0.399910 | 3.814276 | 6.628454 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0015190 | RBH | 1.806170 | 10.072151 | 13.408056 |
