Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_04g0026880 | OGI:04091440 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr04:29550542-29551643 | ||||||||
| Gene Symbol | ERF77, OsAP2-39, AP2-39, OsERF#077, OsERF077, OsERF77, AP2/EREBP#149, AP2/EREBP149, DLN121, OsDLN121 | ||||||||||
| DNA seq | cccccaaactccaacgcaccaccagcgccaaaccaaccacccaccatccaccggtcgaacacttggcgctctcgcccgccttagctcgctctgctcgtggtgctcgacccgaacaagaacggacatggctcccaggaacgccgccgaggccgtcgccgtcgccgtggcggagggcggaggagacggcatggagcccaggttccgcggcgtgaggaagcgcccgtggggcaggtacgcggcggagatccgtgacccggccaggaaggcgcgggtgtggctcggcaccttcgacaccgccgaggccgcggcgcgcgcctacgacagcgccgcgctccacttccgcgggcccaaggccaagaccaacttccccgtcgccttcgcgcacgcccaccaccacgccccgccgccgccgctgcccaaggcggcggcgctggccgtcgtcagcccgaccagcagcacggtcgagtcgtcctcccgggacacgcccgccgccgccccggtggcggccgcggccaaggcccaggtgcccgcctcgccttcgctcgatctgagcctcgggatgtcggccatggtggccgcccagccgttcctgttcctcgaccccagggtcgcggtgaccgtggccgtcgcggcaccggtgcctcgccggccggccgtcgtcagcgtcaagaaggaggtagctcgcctggacgagcagagcgacaccggctcgtcgtcatccgtggtggacgcctcgccggccgtcggcgtggggctcgacctgaacctgccgccgccgatcgaggaggcgtaggttgcagcgcccgatgacgacgacaagacccccccacaaatccctcgtagaaaagtctagagcgacgtgtaatataagaggttaatcgtccgtttaattgccaggattgatcaactaggtgtacatagatcgtgtcctttttgcacggggagataggtatgaggaaaaggctactactcccggtgttacagttcctttaaagaaagaaggaaaaaaaacaagaaaagaaaaagaaaacattttgttgttcgatgtaacatattgatcatcaatctctgattaatgagaaatttacgttattttgttctt
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| CDS seq | atggctcccaggaacgccgccgaggccgtcgccgtcgccgtggcggagggcggaggagacggcatggagcccaggttccgcggcgtgaggaagcgcccgtggggcaggtacgcggcggagatccgtgacccggccaggaaggcgcgggtgtggctcggcaccttcgacaccgccgaggccgcggcgcgcgcctacgacagcgccgcgctccacttccgcgggcccaaggccaagaccaacttccccgtcgccttcgcgcacgcccaccaccacgccccgccgccgccgctgcccaaggcggcggcgctggccgtcgtcagcccgaccagcagcacggtcgagtcgtcctcccgggacacgcccgccgccgccccggtggcggccgcggccaaggcccaggtgcccgcctcgccttcgctcgatctgagcctcgggatgtcggccatggtggccgcccagccgttcctgttcctcgaccccagggtcgcggtgaccgtggccgtcgcggcaccggtgcctcgccggccggccgtcgtcagcgtcaagaaggaggtagctcgcctggacgagcagagcgacaccggctcgtcgtcatccgtggtggacgcctcgccggccgtcggcgtggggctcgacctgaacctgccgccgccgatcgaggaggcgtag
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| Protein seq | MAPRNAAEAVAVAVAEGGGDGMEPRFRGVRKRPWGRYAAEIRDPARKARVWLGTFDTAEAAARAYDSAALHFRGPKAKTNFPVAFAHAHHHAPPPPLPKAAALAVVSPTSSTVESSSRDTPAAAPVAAAAKAQVPASPSLDLSLGMSAMVAAQPFLFLDPRVAVTVAVAAPVPRRPAVVSVKKEVARLDEQSDTGSSSSVVDASPAVGVGLDLNLPPPIEEA |
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| Function | Ethylene-responsive transcription factor 10 [UniProtKB/Swiss-Prot:Q9ZWA2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_04g0026880 | OsKeNa_04g0026880.01 | Chr04 | 29550542 | 29551643 | + | NAM | ||
| CDS seq | atggctcccaggaacgccgccgaggccgtcgccgtcgccgtggcggagggcggaggagacggcatggagcccaggttccgcggcgtgaggaagcgcccgtggggcaggtacgcggcggagatccgtgacccggccaggaaggcgcgggtgtggctcggcaccttcgacaccgccgaggccgcggcgcgcgcctacgacagcgccgcgctccacttccgcgggcccaaggccaagaccaacttccccgtcgccttcgcgcacgcccaccaccacgccccgccgccgccgctgcccaaggcggcggcgctggccgtcgtcagcccgaccagcagcacggtcgagtcgtcctcccgggacacgcccgccgccgccccggtggcggccgcggccaaggcccaggtgcccgcctcgccttcgctcgatctgagcctcgggatgtcggccatggtggccgcccagccgttcctgttcctcgaccccagggtcgcggtgaccgtggccgtcgcggcaccggtgcctcgccggccggccgtcgtcagcgtcaagaaggaggtagctcgcctggacgagcagagcgacaccggctcgtcgtcatccgtggtggacgcctcgccggccgtcggcgtggggctcgacctgaacctgccgccgccgatcgaggaggcgtag
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| Protein seq | MAPRNAAEAVAVAVAEGGGDGMEPRFRGVRKRPWGRYAAEIRDPARKARVWLGTFDTAEAAARAYDSAALHFRGPKAKTNFPVAFAHAHHHAPPPPLPKAAALAVVSPTSSTVESSSRDTPAAAPVAAAAKAQVPASPSLDLSLGMSAMVAAQPFLFLDPRVAVTVAVAAPVPRRPAVVSVKKEVARLDEQSDTGSSSSVVDASPAVGVGLDLNLPPPIEEA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.232377 | 4.310619 | 1.275000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0610400 | RBH | 2.621868 | 3.025936 | 9.630189 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g52090 | RBH | 1.690336 | 1.837223 | 2.235384 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0610400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0026090 | RBH | 0.172391 | 4.762490 | 7.635933 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0026640 | RBH | 1.149626 | 2.015190 | 7.199534 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0026320 | RBH | 0.0 | 0.053575 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0026590 | RBH | 1.901608 | 17.114790 | 9.192236 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0487400 | RBH | 13.15205 | 482.361862 | 38.6230525 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0025360 | RBH | 0.0 | 1.007292 | 1.719410 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0490900 | RBH | 24.270832 | 438.975174 | 12.806653 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0025840 | RBH | 0.301826 | 0.110765 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0025660 | RBH | 0.0 | 9.632940 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0025710 | RBH | 0.0 | 19.339996 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0026140 | RBH | 0.253659 | 0.653421 | 2.307830 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0026300 | RBH | 0.0 | 6.993711 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G025560 | RBH | 0.0 | 2.425711 | 2.956670 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0025450 | RBH | 0.0 | 3.593677 | 7.402582 |
