Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_03g0038110 | OGI:03093470 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr03:34514770-34523731 | ||||||||
| Gene Symbol | MEL1, mel1, OsMEL1, MEAL1, OsMEAL1, OsAGO5c | ||||||||||
| DNA seq | aacaaaagccacagggaaatttaaaagacttgcattgtctcaagcagagttaaggccttaaagaccacaaaagctcagtcacaatccggctactcggaaacagcaaatggaactacaagcaaccagctccaaaccaaggacacaaacaagtctaccaaccaaaaaactaccagaatattgggctctccttgccaacaatctcctcagcagtagaacatgacgtccttgacgttctccttgatcttgggaagctggcgcacctccacagggccctctcgcgccacagcctgcccgctgctgccaggggtcgagccaccatccgaactctctccttccacgtagtagcgagcgcggaatgcagcaagatgagcatagtaggccggtgggactgcacaggaaagaaaaagagcaatacatcagtggacaaatgcaacagatttgaaaaggagcaccacgtagaaaagaatctctgtagttcaattgctagtgcctagaaagtagcatgagagcatcgcatgcgaaatgataggattcagcagatttgaaaaccacatgtttaggaacagttaacatgatgacattgatggtgcttgacaagcaaataacactaggttcgattcacttcaaaaagcaagatcacatgatgtgcattacatacagtagacagacacaatttcaatcttaatgaaatttggtcggctccttcgccgacctggcaaaaacacaatttcaaaacatgctaaattgcacagataggaaaatgagtactacatcagtgaatagaaaggaaaatgtttcggtagttcaattgctagttccagaaagtaacatgggagcatcacatacaaaatgataagatacaaatggaacacattcgaaaagaaaatgctgaggacaattttgaaaagcagatgttgtggaacagttaacaagatgacattggtggtgcataacaagcaatgacagctgtgcagttcccttaccacatgatgaattgggtgcattacagtaaacaaaggtccaatttttaacacaagctaaataaggatttctactgttgagaacaacagcctactcctagcgcttatcttttccagttcacagttaaaccaatgccaaaaattttggtgtacacatttgcttgctcatcgaaggaggtaaacaaagctaagcaaactaatgcagaaatgagaaacaaagatgcaagaaaagaagactcacccacagacactgcccgggtgcatcgcgcatagctgcattttgccaacagtaggaattatcagagttggggcagccgaaataataagggagctaagcaactaagcagaaacagagaaatgaacttacgtatagcaaagattgttggtcagggactgaagtgcatcggctgtaaaatggttctcatcgtaaaggacatggtaatgagttggcctgctagtaccctgagaaaaggaatgtcaagagcacacattaactgaaaattttgttggctggaaaattttgtgcaatctgcaaacagcttccagcatgggttttacctgtatgccagcatggctacacaggtagaaatcgaactctgtaggatggcaaatctgacggtccacgacagttcctgcaggaccaaaaagaaacggaatacaacgatatatccaatcatcaaatgcctgaagaagtagcagatgtatgttctcagtagcaaccaacaagaaactgaccaggaaggatgtttccgctcttgtcagtcatgtctcgcctcccatgaacctctgggaaaagccttgtgtgatgccttttctgaactactacaaatgtgacaggtggtagatatccctcctccaaagatgcacaagccttgcaatgtaaaaggattaaattcagaaaaaacaatgaaattggcttgtccagaatagataacacagacagatgtatcatgatgcgaagctcacctttctgatggcatccatttcatgaagaagcacatggctgaactgaccttcacttacaccatctctgcagaggagaatgaccactcaacaaatttcatttaactggacacaccactgaacagaacagaatttccaggacatacctatagaagattatcctctcaggccttctgccagtcttcttgcggaatgcgataagcaactccctgtaaacaagagcatggtcagttcccagttgaacctacaataatatacaattgcaataccacattgaccacaaatttacctgatcatcccaccatttacaaccttcactggatctttaccaacactaaagagatcttctattatctcctgtctatgtggttgagcagagaccagacctcggtatttggtgatttcaggccaatccatagatgccacaacctacatgaacacaaagaaaatataccagtaaagtttgtatatgcaaagcaataaactttgggaagaaaaatatagttcatctattgcatcaagttattcacaggatagcccatgatcttgtattgtaggacaacatcaaacagaccaagtaatgaattgaagaaccattagctaggagggtactaaccgcagcaatagatgatgcagagtcctctccaggtggagggtgtgtgacatcagcgccaaagatgattgttgggacttctgacacaaatggtatgccattgcggataaaggctcgctcaagaacagtgttgcgccctccgacctggttatggcacagaattgtcatacttctgggggagaatactaaaagcacacaagatatagtccacagaattggtatagttctagggaaaaaaatacaagcccagcagaattacagaccttgacattgattttgagtgcaacattttccaaatattgcttgttcggcctgctggcatgccttggcaaacaacattgagatacaatgccaaggtcagtctcacagacccttttaattttccctgtaaaaaccatgcatatacgacatttaataaataaatcagggaatggaaaagttacccaaccaacaatatacataccataagaaccactaacttcaggcagaattacaattaaaagctgcaggcctccctttccctctctggctagcagttctgatgttctcctgtgaacatccctcagagcattctctatattgttaggatttgttgaccggacatccacgactggtcttggattgaaagactacagggtcaagtcaaagttaattgcagcacatataattattaaactgctttaatagcattgtaactatgccagagttaccattccagtggcattgcacatctgaatcaggtcaccacagaacctttgtacctcctcaggacgcattcgtgaaaaactcagacatgtccagttatccacagttcctccattgatcattttctgaaaaaattaacaagtattagtgtcttcctttaaacacatcagcaagtaaattatgttggctcagtagtttgtatctttacaggttctgcaattatgtttcagtacaaggttgtcaatttcagatactctccaacaaaaaataatgctaatggtcaattcataaagaagttaagcaagtgtacctagaattcactttcaaacaaaggcaatacaaaattaacctgagagagaaattgagttgtaataataaagcaaggcatcaccttgttaatcatgttccactgtccaacactgggtgcacaagttttctcccttccagaatcatgatacttcaactgaaaagcgcaaagattaaggttgttagaaattcccagcagtttaaacaatgcgaacaaaagaaatggaataaagcatagtaccatgggtggaggcagcacacgggctggaacagagactaggtcattgcagaccttgataccgaactcctgagcaaacctatcctctgtatacttgttgtggagaaccatctgatagaagatgaaatggaagtcaatacaaatacatgatattgtcttcattatctcatcaagaaaaaaatatagccttatgttctacggaaatgttattctaataaaatgtgcagaaataaaaggccattaaatgtgagcaaaaatccaaaagcataaaaagtttggctctgcatctacatggtattgtacctcatgaatgctctgttccctctgctgggggcgttgacaggttgctctaaggatgttggtcacttgtttgtcattaagcttcttggagtacctctgcccttctacaatcttgcacacctgcaaacacatttgcatgaacaaactgcacacagcatgcacaattcaggtagaggtaaatggatgatgaatcaatacctccataggtaagtatacagggcgagaatcactgccagactgtaggcagggccaagaagcgtacttcagtctgtaattgtacctatcccagaagtactgaacaacagtcttccttgtcccattatcatcaacaggaaatctaacaacatcaaaccaggcatcagtttggtgaaaaacaagttatgttcatgctataaaacagtgaacaagcatgataacaaaatgcaggtcctaaaaaagatgacaaagcactattctcaggacagtaaaattatgtgcacttcaacctttacacatcaattttgttgaacattgaaggacatttcacagcattgacagtatggatatcaaaggaacatacattgatatctaaggaataaacctttgaaaaggattaaaatgtttctatcacatgtccacaaacaattaatgtacttaccatgcccaagatccataaacaaagacatttcaaatattccatcaacaatctatattgattttctgtatcttaaagaatgtaaacaaaaagagagttatagcagaagcagaggaaagataagtacatcagctggctcataggaatgggggtaatccctgttatcttgtatcttctgatttggtcctcttggtggtttgtttcaatgcgaaccccacgtaatgctttctttatctaaacatcatgaaaaatgagttaggatcagtattgcatgattttatgaattccatcagtaggaatattaccttcacacgatcccggtctgacaaaggtcttgaggtgtcacgtatgttcaggaactcctccacaaattggatcactgtcacaggcttaaaaaaggacgttgcagatatatctgaatgaagcataccgaacagtagttagtatctgaaaagatcacttccattcagagaaaactgataaacagtaactgacagggaagtacctatattcagcgaaaggcccatctgtgttgggcgcaggctctgatagtaacctctccaacactcaagtccctcaccaatgtcaccccggtgaccaaactgggtagagaagaaggatctggacactgtgacataactgcagaaaaagtagttatcaatgcattatttgtaccctagtcagtaaataatcaagcaaaagtcaaaacaaagacaagaaagaatcatacttccaagatggtgactccctaaggacaacatcaagaacttgaatggtttcttggggcatatccctctgtcttccaagcaaaaactgctggaggtggtacaagtctgttctgccagcaatccgaattgtgatcttgtactccctctccgccctgcagaagacaagaaagaaaaaataatatgagactgcaaaacacataattcataagaatttaaatctctagtttgcatcatacaaacctttctttatccttcttttcgggatcaattagcttaaccacaaactcctccgattcaaaagggagtgaaccagcagtatagagactctttcttccatcataggcaggcaatttgccaccaagagatgtcttcccgtgcaacttgatgagctcattgagtacttccctatttgttgctcttgattttgactcaggattgattgaaacctgtaacataatccaaaaagaagatcaacggcctttctattggacatgaggggcagaTtttttttttataaaaaggaagatcttagagcaacttaacaagaactctacagtaaacatcacgtaacaagtagtttagatcagagcagttaaccatcactaatacaccaaactactcaatgtgtatttcgtctagacctaaatgagtaattcagcaccaagttatgagtagtacacacattatccgagccgattgattagggaaatgaatgcaggccgaacaaaaaaacagaatgccccaaagtaacgaaatctaaatcagctagggaccaacagaaatcaaacaacaaagaaggtggtaaagattgatcctctccattgaggtcacgatagaggtagaactacacttgcaatactacgggtacgacacttacatggggcgggcatccatggcggacgctagagcctggagggaatcgccggcgaagcgttcgaggaatggggagagaagcatggggagagttgaagaatagctgtactacgggtcgaacatgaagaatagctatactacgagttctttaaagcccaccaaagcccataggaacagggccaagaatatcggtacagctcaggaatcagaaaccaaacatcaaagcccaaaaacaaaataagaaatggaactactactaaaagccccaaagcaaaacaaaacatatgaaacgagtttgcaagaattccacctgaaaaaacgttattgttttttgaacgaataaaaaaaaagctaggcgtacaagatcatgaatgagaacgacatcctgaagacaacgataaaattttcatatattttgccaaaaaaaagagcagaaaacacaaaaaccaaaagccacatgtatcatgagtttttaaacgtggatccaccactctacttctgcaagcgacaggcttccggccgctggagagttgctgcaagaagatcagagaaaggacagcggtcactagtccgctgctacaagaaaacaagaatcgatctgaccactttggatgcaaaagttcacgcgaaggcttcgcatacagggagaacaagtttaacatgtcccttgcaagaaaatagcaagcgaacgtatccgcttacacaaaaatggcagtctccaaaagacaacaaaagaaacagtcaaaaccagaggtagaaccgaccgggcagggcacagagaggtttcgtcgtcttccaactcacacaaaaaaaagcaaacttgtaaagtagaacaaaacgatgcaaaacctttgcttgcagagggaaaaacccgaccagctcccacgagggagagatcagaactacccttgtacgaaatcagcaaccccaaacacagcaaccgttctgaagaaaacgggatgcgcgcgcatgtacgccagtgcgtttagcagatgagatgcatgtcacgaaaacgaacgcaacgaaacgcttcgaattggtgagctgcgtgtgctgcggccatgagatttctgtcgacatcggccagatctctagcaccaaactagcagcgagcaccgaaggtgtaaatggccaaacaaacggaggggatcaaaaaatcggagaagaaactttatgcaagaaacgaaacgcgacgctccgaccaacacccacgaactggatgataaactttaaacgaaagcagcagagaaacgaacttgcaatcgaaagaacgaaacagaaggatcaagaagcaaaactgaaccgagcaacctacccttgtacgaaacgtaaaacgttcccaactaaacaacgacatgcatgtacgccggtgcgttgagcacgtgagacgcgtactacatatgtacatgcatatcaccaaattaaacaaacagaacgaaaggcttcgaacgggtgagctgcgtgtgctgcggccctctcgacatcggccagatctctagcaccaaactagcagcgagcaccgaagtggagaaggccaaataaacggagaagaaactttatgccagaaaggagacgcgactctccgaccaaacacccacaaactaggatgagatcggaagccctcgctccatgcaaaactgcaaacgaaggcagcagagaaacgaacttgccatcgacacaacaaaaaaaaatcatccagaagcaagcaaaatccatgcatacacacaacatgcaaggtaaatttaacagatctgaccatcacacgtacaggagtacagtagtagacagcatgcatggagtatgcgtagatctaggggtgggaagggaagggaaagagggtcaggggtgagctcacatcgtagtggaagaggttgttgtcggcgacattgacgaggaagtggttcgcgcggatcatcaccttcttcccggccgctccgaaccccggccgcgcagggtgggcgagccccttcttcgacaccggtgccagatccttgtccgactccaccgacgcctcgccagccggcgcggccgcggccgacgccaccgccgcgggtggcgccagcgcggtctccgacacgaacagcttctgctcgaactccttggccagagccgtagcggacggcgccgtggaggacgacgagggagccggcgcggccgccgccggctggtacggagccggagccgacgagtgcgacggcggaggcgcccggatggtgacgggcgtgctgcgcgcgtagccaccgatcaccggaacccccggggagggcgcacggtacacgcccccgggctggtacgcgccctggtggtgcgccgccggcatcggcgcgccgtagacgacggccggcggccccggccgcgggtactgcggctgaggaggccccggccgcggcgtcatccccggcggcggccacacgaagcccgaggcgggacggtacggcggggctccacccccaccaccaccgccaccacggccagggacgtcgccgcggccggagtagggcggccgctgctcgccgccgcggccacctcggcctccgccgcggtaggccatggcagagagagaggtggaggaaggcaacgagatggaggtgagggtttgggaaggggtggggagtgggtgag
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| CDS seq | atggcctaccgcggcggaggccgaggtggccgcggcggcgagcagcggccgccctactccggccgcggcgacgtccctggccgtggtggcggtggtggtgggggtggagccccgccgtaccgtcccgcctcgggcttcgtgtggccgccgccggggatgacgccgcggccggggcctcctcagccgcagtacccgcggccggggccgccggccgtcgtctacggcgcgccgatgccggcggcgcaccaccagggcgcgtaccagcccgggggcgtgtaccgtgcgccctccccgggggttccggtgatcggtggctacgcgcgcagcacgcccgtcaccatccgggcgcctccgccgtcgcactcgtcggctccggctccgtaccagccggcggcggccgcgccggctccctcgtcgtcctccacggcgccgtccgctacggctctggccaaggagttcgagcagaagctgttcgtgtcggagaccgcgctggcgccacccgcggcggtggcgtcggccgcggccgcgccggctggcgaggcgtcggtggagtcggacaaggatctggcaccggtgtcgaagaaggggctcgcccaccctgcgcggccggggttcggagcggccgggaagaaggtgatgatccgcgcgaaccacttcctcgtcaatgtcgccgacaacaacctcttccactacgatgtttcaatcaatcctgagtcaaaatcaagagcaacaaatagggaagtactcaatgagctcatcaagttgcacgggaagacatctcttggtggcaaattgcctgcctatgatggaagaaagagtctctatactgctggttcactcccttttgaatcggaggagtttgtggttaagctaattgatcccgaaaagaaggataaagaaagggcggagagggagtacaagatcacaattcggattgctggcagaacagacttgtaccacctccagcagtttttgcttggaagacagagggatatgccccaagaaaccattcaagttcttgatgttgtccttagggagtcaccatcttggaattatgtcacagtgtccagatccttcttctctacccagtttggtcaccggggtgacattggtgagggacttgagtgttggagaggttactatcagagcctgcgcccaacacagatgggcctttcgctgaatatagatatatctgcaacgtccttttttaagcctgtgacagtgatccaatttgtggaggagttcctgaacatacgtgacacctcaagacctttgtcagaccgggatcgtgtgaagataaagaaagcattacgtggggttcgcattgaaacaaaccaccaagaggaccaaatcagaagatacaagataacagggattacccccattcctatgagccagctgatatttcctgttgatgataatgggacaaggaagactgttgttcagtacttctgggataggtacaattacagactgaagtacgcttcttggccctgcctacagtctggcagtgattctcgccctgtatacttacctatggaggtgtgcaagattgtagaagggcagaggtactccaagaagcttaatgacaaacaagtgaccaacatccttagagcaacctgtcaacgcccccagcagagggaacagagcattcatgagatggttctccacaacaagtatacagaggataggtttgctcaggagttcggtatcaaggtctgcaatgacctagtctctgttccagcccgtgtgctgcctccacccatgttgaagtatcatgattctggaagggagaaaacttgtgcacccagtgttggacagtggaacatgattaacaagaaaatgatcaatggaggaactgtggataactggacatgtctgagtttttcacgaatgcgtcctgaggaggtacaaaggttctgtggtgacctgattcagatgtgcaatgccactggaatgtctttcaatccaagaccagtcgtggatgtccggtcaacaaatcctaacaatatagagaatgctctgagggatgttcacaggagaacatcagaactgctagccagagagggaaagggaggcctgcagcttttaattgtaattctgcctgaagttagtggttcttatgggaaaattaaaagggtctgtgagactgaccttggcattgtatctcaatgttgtttgccaaggcatgccagcaggccgaacaagcaatatttggaaaatgttgcactcaaaatcaatgtcaaggtcggagggcgcaacactgttcttgagcgagcctttatccgcaatggcataccatttgtgtcagaagtcccaacaatcatctttggcgctgatgtcacacaccctccacctggagaggactctgcatcatctattgctgcggttgtggcatctatggattggcctgaaatcaccaaataccgaggtctggtctctgctcaaccacatagacaggagataatagaagatctctttagtgttggtaaagatccagtgaaggttgtaaatggtgggatgatcagggagttgcttatcgcattccgcaagaagactggcagaaggcctgagaggataatcttctatagagatggtgtaagtgaaggtcagttcagccatgtgcttcttcatgaaatggatgccatcagaaaggcttgtgcatctttggaggagggatatctaccacctgtcacatttgtagtagttcagaaaaggcatcacacaaggcttttcccagaggttcatgggaggcgagacatgactgacaagagcggaaacatccttcctggaactgtcgtggaccgtcagatttgccatcctacagagttcgatttctacctgtgtagccatgctggcatacagggtactagcaggccaactcattaccatgtcctttacgatgagaaccattttacagccgatgcacttcagtccctgaccaacaatctttgctatacctatgcgcgatgcacccgggcagtgtctgtggtcccaccggcctactatgctcatcttgctgcattccgcgctcgctactacgtggaaggagagagttcggatggtggctcgacccctggcagcagcgggcaggctgtggcgcgagagggccctgtggaggtgcgccagcttcccaagatcaaggagaacgtcaaggacgtcatgttctactgctga
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| Protein seq | MAYRGGGRGGRGGEQRPPYSGRGDVPGRGGGGGGGGAPPYRPASGFVWPPPGMTPRPGPPQPQYPRPGPPAVVYGAPMPAAHHQGAYQPGGVYRAPSPGVPVIGGYARSTPVTIRAPPPSHSSAPAPYQPAAAAPAPSSSSTAPSATALAKEFEQKLFVSETALAPPAAVASAAAAPAGEASVESDKDLAPVSKKGLAHPARPGFGAAGKKVMIRANHFLVNVADNNLFHYDVSINPESKSRATNREVLNELIKLHGKTSLGGKLPAYDGRKSLYTAGSLPFESEEFVVKLIDPEKKDKERAEREYKITIRIAGRTDLYHLQQFLLGRQRDMPQETIQVLDVVLRESPSWNYVTVSRSFFSTQFGHRGDIGEGLECWRGYYQSLRPTQMGLSLNIDISATSFFKPVTVIQFVEEFLNIRDTSRPLSDRDRVKIKKALRGVRIETNHQEDQIRRYKITGITPIPMSQLIFPVDDNGTRKTVVQYFWDRYNYRLKYASWPCLQSGSDSRPVYLPMEVCKIVEGQRYSKKLNDKQVTNILRATCQRPQQREQSIHEMVLHNKYTEDRFAQEFGIKVCNDLVSVPARVLPPPMLKYHDSGREKTCAPSVGQWNMINKKMINGGTVDNWTCLSFSRMRPEEVQRFCGDLIQMCNATGMSFNPRPVVDVRSTNPNNIENALRDVHRRTSELLAREGKGGLQLLIVILPEVSGSYGKIKRVCETDLGIVSQCCLPRHASRPNKQYLENVALKINVKVGGRNTVLERAFIRNGIPFVSEVPTIIFGADVTHPPPGEDSASSIAAVVASMDWPEITKYRGLVSAQPHRQEIIEDLFSVGKDPVKVVNGGMIRELLIAFRKKTGRRPERIIFYRDGVSEGQFSHVLLHEMDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPEVHGRRDMTDKSGNILPGTVVDRQICHPTEFDFYLCSHAGIQGTSRPTHYHVLYDENHFTADALQSLTNNLCYTYARCTRAVSVVPPAYYAHLAAFRARYYVEGESSDGGSTPGSSGQAVAREGPVEVRQLPKIKENVKDVMFYC |
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| Function | Protein argonaute MEL1 [UniProtKB/Swiss-Prot:Q851R2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_03g0038110 | OsKeNa_03g0038110.01 | Chr03 | 34514770 | 34523731 | - | NAM | ||
| CDS seq | atggcctaccgcggcggaggccgaggtggccgcggcggcgagcagcggccgccctactccggccgcggcgacgtccctggccgtggtggcggtggtggtgggggtggagccccgccgtaccgtcccgcctcgggcttcgtgtggccgccgccggggatgacgccgcggccggggcctcctcagccgcagtacccgcggccggggccgccggccgtcgtctacggcgcgccgatgccggcggcgcaccaccagggcgcgtaccagcccgggggcgtgtaccgtgcgccctccccgggggttccggtgatcggtggctacgcgcgcagcacgcccgtcaccatccgggcgcctccgccgtcgcactcgtcggctccggctccgtaccagccggcggcggccgcgccggctccctcgtcgtcctccacggcgccgtccgctacggctctggccaaggagttcgagcagaagctgttcgtgtcggagaccgcgctggcgccacccgcggcggtggcgtcggccgcggccgcgccggctggcgaggcgtcggtggagtcggacaaggatctggcaccggtgtcgaagaaggggctcgcccaccctgcgcggccggggttcggagcggccgggaagaaggtgatgatccgcgcgaaccacttcctcgtcaatgtcgccgacaacaacctcttccactacgatgtttcaatcaatcctgagtcaaaatcaagagcaacaaatagggaagtactcaatgagctcatcaagttgcacgggaagacatctcttggtggcaaattgcctgcctatgatggaagaaagagtctctatactgctggttcactcccttttgaatcggaggagtttgtggttaagctaattgatcccgaaaagaaggataaagaaagggcggagagggagtacaagatcacaattcggattgctggcagaacagacttgtaccacctccagcagtttttgcttggaagacagagggatatgccccaagaaaccattcaagttcttgatgttgtccttagggattatgtcacagtgtccagatccttcttctctacccagtttggtcaccggggtgacattggtgagggacttgagtgttggagaggttactatcagagcctgcgcccaacacagatgggcctttcgctgaatatagatatatctgcaacgtccttttttaagcctgtgacagtgatccaatttgtggaggagttcctgaacatacgtgacacctcaagacctttgtcagaccgggatcgtgtgaagataaagaaagcattacgtggggttcgcattgaaacaaaccaccaagaggaccaaatcagaagatacaagataacagggattacccccattcctatgagccagctgatatttcctgttgatgataatgggacaaggaagactgttgttcagtacttctgggataggtacaattacagactgaagtacgcttcttggccctgcctacagtctggcagtgattctcgccctgtatacttacctatggaggtgtgcaagattgtagaagggcagaggtactccaagaagcttaatgacaaacaagtgaccaacatccttagagcaacctgtcaacgcccccagcagagggaacagagcattcatgagatggttctccacaacaagtatacagaggataggtttgctcaggagttcggtatcaaggtctgcaatgacctagtctctgttccagcccgtgtgctgcctccacccatgttgaagtatcatgattctggaagggagaaaacttgtgcacccagtgttggacagtggaacatgattaacaagaaaatgatcaatggaggaactgtggataactggacatgtctgagtttttcacgaatgcgtcctgaggaggtacaaaggttctgtggtgacctgattcagatgtgcaatgccactggaatgtctttcaatccaagaccagtcgtggatgtccggtcaacaaatcctaacaatatagagaatgctctgagggatgttcacaggagaacatcagaactgctagccagagagggaaagggaggcctgcagcttttaattgtaattctgcctgaagttagtggttcttatgggaaaattaaaagggtctgtgagactgaccttggcattgtatctcaatgttgtttgccaaggcatgccagcaggccgaacaagcaatatttggaaaatgttgcactcaaaatcaatgtcaaggtcggagggcgcaacactgttcttgagcgagcctttatccgcaatggcataccatttgtgtcagaagtcccaacaatcatctttggcgctgatgtcacacaccctccacctggagaggactctgcatcatctattgctgcggttgtggcatctatggattggcctgaaatcaccaaataccgaggtctggtctctgctcaaccacatagacaggagataatagaagatctctttagtgttggtaaagatccagtgaaggttgtaaatggtgggatgatcagggagttgcttatcgcattccgcaagaagactggcagaaggcctgagaggataatcttctatagagatggtgtaagtgaaggtcagttcagccatgtgcttcttcatgaaatggatgccatcagaaaggcttgtgcatctttggaggagggatatctaccacctgtcacatttgtagtagttcagaaaaggcatcacacaaggcttttcccagaggttcatgggaggcgagacatgactgacaagagcggaaacatccttcctggaactgtcgtggaccgtcagatttgccatcctacagagttcgatttctacctgtgtagccatgctggcatacagggtactagcaggccaactcattaccatgtcctttacgatgagaaccattttacagccgatgcacttcagtccctgaccaacaatctttgctatacctatgcgcgatgcacccgggcagtgtctgtggtcccaccggcctactatgctcatcttgctgcattccgcgctcgctactacgtggaaggagagagttcggatggtggctcgacccctggcagcagcgggcaggctgtggcgcgagagggccctgtggaggtgcgccagcttcccaagatcaaggagaacgtcaaggacgtcatgttctactgctga
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| Protein seq | MAYRGGGRGGRGGEQRPPYSGRGDVPGRGGGGGGGGAPPYRPASGFVWPPPGMTPRPGPPQPQYPRPGPPAVVYGAPMPAAHHQGAYQPGGVYRAPSPGVPVIGGYARSTPVTIRAPPPSHSSAPAPYQPAAAAPAPSSSSTAPSATALAKEFEQKLFVSETALAPPAAVASAAAAPAGEASVESDKDLAPVSKKGLAHPARPGFGAAGKKVMIRANHFLVNVADNNLFHYDVSINPESKSRATNREVLNELIKLHGKTSLGGKLPAYDGRKSLYTAGSLPFESEEFVVKLIDPEKKDKERAEREYKITIRIAGRTDLYHLQQFLLGRQRDMPQETIQVLDVVLRDYVTVSRSFFSTQFGHRGDIGEGLECWRGYYQSLRPTQMGLSLNIDISATSFFKPVTVIQFVEEFLNIRDTSRPLSDRDRVKIKKALRGVRIETNHQEDQIRRYKITGITPIPMSQLIFPVDDNGTRKTVVQYFWDRYNYRLKYASWPCLQSGSDSRPVYLPMEVCKIVEGQRYSKKLNDKQVTNILRATCQRPQQREQSIHEMVLHNKYTEDRFAQEFGIKVCNDLVSVPARVLPPPMLKYHDSGREKTCAPSVGQWNMINKKMINGGTVDNWTCLSFSRMRPEEVQRFCGDLIQMCNATGMSFNPRPVVDVRSTNPNNIENALRDVHRRTSELLAREGKGGLQLLIVILPEVSGSYGKIKRVCETDLGIVSQCCLPRHASRPNKQYLENVALKINVKVGGRNTVLERAFIRNGIPFVSEVPTIIFGADVTHPPPGEDSASSIAAVVASMDWPEITKYRGLVSAQPHRQEIIEDLFSVGKDPVKVVNGGMIRELLIAFRKKTGRRPERIIFYRDGVSEGQFSHVLLHEMDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPEVHGRRDMTDKSGNILPGTVVDRQICHPTEFDFYLCSHAGIQGTSRPTHYHVLYDENHFTADALQSLTNNLCYTYARCTRAVSVVPPAYYAHLAAFRARYYVEGESSDGGSTPGSSGQAVAREGPVEVRQLPKIKENVKDVMFYC
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_03g0038110 | OsKeNa_03g0038110.02 | Chr03 | 34514785 | 34523731 | - | NAM | ||
| CDS seq | atggcctaccgcggcggaggccgaggtggccgcggcggcgagcagcggccgccctactccggccgcggcgacgtccctggccgtggtggcggtggtggtgggggtggagccccgccgtaccgtcccgcctcgggcttcgtgtggccgccgccggggatgacgccgcggccggggcctcctcagccgcagtacccgcggccggggccgccggccgtcgtctacggcgcgccgatgccggcggcgcaccaccagggcgcgtaccagcccgggggcgtgtaccgtgcgccctccccgggggttccggtgatcggtggctacgcgcgcagcacgcccgtcaccatccgggcgcctccgccgtcgcactcgtcggctccggctccgtaccagccggcggcggccgcgccggctccctcgtcgtcctccacggcgccgtccgctacggctctggccaaggagttcgagcagaagctgttcgtgtcggagaccgcgctggcgccacccgcggcggtggcgtcggccgcggccgcgccggctggcgaggcgtcggtggagtcggacaaggatctggcaccggtgtcgaagaaggggctcgcccaccctgcgcggccggggttcggagcggccgggaagaaggtgatgatccgcgcgaaccacttcctcgtcaatgtcgccgacaacaacctcttccactacgatgtttcaatcaatcctgagtcaaaatcaagagcaacaaatagggaagtactcaatgagctcatcaagttgcacgggaagacatctcttggtggcaaattgcctgcctatgatggaagaaagagtctctatactgctggttcactcccttttgaatcggaggagtttgtggttaagctaattgatcccgaaaagaaggataaagaaagggcggagagggagtacaagatcacaattcggattgctggcagaacagacttgtaccacctccagcagtttttgcttggaagacagagggatatgccccaagaaaccattcaagttcttgatgttgtccttagggagtcaccatcttggaattatgtcacagtgtccagatccttcttctctacccagtttggtcaccggggtgacattggtgagggacttgagtgttggagaggttactatcagagcctgcgcccaacacagatgggcctttcgctgaatatagatatatctgcaacgtccttttttaagcctgtgacagtgatccaatttgtggaggagttcctgaacatacgtgacacctcaagacctttgtcagaccgggatcgtgtgaagataaagaaagcattacgtggggttcgcattgaaacaaaccaccaagaggaccaaatcagaagatacaagataacagggattacccccattcctatgagccagctgatatttcctgttgatgataatgggacaaggaagactgttgttcagtacttctgggataggtacaattacagactgaagtacgcttcttggccctgcctacagtctggcagtgattctcgccctgtatacttacctatggaggtgtgcaagattgtagaagggcagaggtactccaagaagcttaatgacaaacaagtgaccaacatccttagagcaacctgtcaacgcccccagcagagggaacagagcattcatgagatggttctccacaacaagtatacagaggataggtttgctcaggagttcggtatcaaggtctgcaatgacctagtctctgttccagcccgtgtgctgcctccacccatgttgaagtatcatgattctggaagggagaaaacttgtgcacccagtgttggacagtggaacatgattaacaagaaaatgatcaatggaggaactgtggataactggacatgtctgagtttttcacgaatgcgtcctgaggaggtacaaaggttctgtggtgacctgattcagatgtgcaatgccactggaatgtctttcaatccaagaccagtcgtggatgtccggtcaacaaatcctaacaatatagagaatgctctgagggatgttcacaggagaacatcagaactgctagccagagagggaaagggaggcctgcagcttttaattgtaattctgcctgaagttagtggttcttatgggaaaattaaaagggtctgtgagactgaccttggcattgtatctcaatgttgtttgccaaggcatgccagcaggccgaacaagcaatatttggaaaatgttgcactcaaaatcaatgtcaaggtcggagggcgcaacactgttcttgagcgagcctttatccgcaatggcataccatttgtgtcagaagtcccaacaatcatctttggcgctgatgtcacacaccctccacctggagaggactctgcatcatctattgctgcggttgtggcatctatggattggcctgaaatcaccaaataccgaggtctggtctctgctcaaccacatagacaggagataatagaagatctctttagtgttggtaaagatccagtgaaggttgtaaatggtgggatgatcagggagttgcttatcgcattccgcaagaagactggcagaaggcctgagaggataatcttctatagagatggtgtaagtgaaggtcagttcagccatgtgcttcttcatgaaatggatgccatcagaaaggcttgtgcatctttggaggagggatatctaccacctgtcacatttgtagtagttcagaaaaggcatcacacaaggcttttcccagaggttcatgggaggcgagacatgactgacaagagcggaaacatccttcctggaactgtcgtggaccgtcagatttgccatcctacagagttcgatttctacctgtgtagccatgctggcatacagggtactagcaggccaactcattaccatgtcctttacgatgagaaccattttacagccgatgcacttcagtccctgaccaacaatctttgctatacctatgcgcgatgcacccgggcagtgtctgtggtcccaccggcctactatgctcatcttgctgcattccgcgctcgctactacgtggaaggagagagttcggatggtggctcgacccctggcagcagcgggcaggctgtggcgcgagagggccctgtggaggtgcgccagcttcccaagatcaaggagaacgtcaaggacgtcatgttctactgctga
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| Protein seq | MAYRGGGRGGRGGEQRPPYSGRGDVPGRGGGGGGGGAPPYRPASGFVWPPPGMTPRPGPPQPQYPRPGPPAVVYGAPMPAAHHQGAYQPGGVYRAPSPGVPVIGGYARSTPVTIRAPPPSHSSAPAPYQPAAAAPAPSSSSTAPSATALAKEFEQKLFVSETALAPPAAVASAAAAPAGEASVESDKDLAPVSKKGLAHPARPGFGAAGKKVMIRANHFLVNVADNNLFHYDVSINPESKSRATNREVLNELIKLHGKTSLGGKLPAYDGRKSLYTAGSLPFESEEFVVKLIDPEKKDKERAEREYKITIRIAGRTDLYHLQQFLLGRQRDMPQETIQVLDVVLRESPSWNYVTVSRSFFSTQFGHRGDIGEGLECWRGYYQSLRPTQMGLSLNIDISATSFFKPVTVIQFVEEFLNIRDTSRPLSDRDRVKIKKALRGVRIETNHQEDQIRRYKITGITPIPMSQLIFPVDDNGTRKTVVQYFWDRYNYRLKYASWPCLQSGSDSRPVYLPMEVCKIVEGQRYSKKLNDKQVTNILRATCQRPQQREQSIHEMVLHNKYTEDRFAQEFGIKVCNDLVSVPARVLPPPMLKYHDSGREKTCAPSVGQWNMINKKMINGGTVDNWTCLSFSRMRPEEVQRFCGDLIQMCNATGMSFNPRPVVDVRSTNPNNIENALRDVHRRTSELLAREGKGGLQLLIVILPEVSGSYGKIKRVCETDLGIVSQCCLPRHASRPNKQYLENVALKINVKVGGRNTVLERAFIRNGIPFVSEVPTIIFGADVTHPPPGEDSASSIAAVVASMDWPEITKYRGLVSAQPHRQEIIEDLFSVGKDPVKVVNGGMIRELLIAFRKKTGRRPERIIFYRDGVSEGQFSHVLLHEMDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPEVHGRRDMTDKSGNILPGTVVDRQICHPTEFDFYLCSHAGIQGTSRPTHYHVLYDENHFTADALQSLTNNLCYTYARCTRAVSVVPPAYYAHLAAFRARYYVEGESSDGGSTPGSSGQAVAREGPVEVRQLPKIKENVKDVMFYC
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr03 | 34520147 | 34520254 | - | OsKeNa_03g0038110.02 | OsKeNa_03g0038110.02,OsKeNa_03g0038110.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.019717 | 0.0 | 0.742087 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0800200 | RBH | 0.000000 | 0.039804 | 0.624508 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g58600 | RBH | 0.000000 | 0.026648 | 0.179210 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0800200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0038430 | RBH | 0.000000 | 0.0 | 1.968582 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0005590 | RBH | 0.0 | 0.0 | 1.691606 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0038160 | RBH | 0.0 | 1.292069 | 8.228833 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0038460 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0038000 | RBH | 0.0 | 0.0 | 3.018927 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0570200 | RBH | 0.111024 | 0.3778115 | 35.9981145 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0037770 | RBH | 0.0 | 0.0 | 0.230655 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0572300 | RBH | 0.2585165 | 0.209509 | 33.457803 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0038350 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0038330 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0037940 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0038000 | RBH | 0.0 | 0.000000 | 0.350415 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0038020 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G037800 | RBH | 0.0 | 0.0 | 2.685417 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0037570 | RBH | 0.0 | 0.0 | 8.280432 |
