Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_03g0029920 | OGI:03076870 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr03:28200737-28208681 | ||||||||
| Gene Symbol | AGO12, OsAGO12 | ||||||||||
| DNA seq | tcagcagtagaacatgaaccgcttaacattctccttgatttcaggaagcggcttcgtcgatcgatccgttcgcgtcgttacggaggaagaagagccctgatcagaatgctcgtcctccatgtagtagcgtgctcggaaggctcccagatgcgcatagtatgctggaggaactgttcagataggagagtaacaaaattcagtaaaaaaaaaaaaagaggaccacagaaagaaagataactggtaagaaaatcagctctgatagctgaataaatgaaaacccgacaagataacgcatacctatggagactgctcgggtgcatcgggcatagctgcaggcaagggatcatccaaggaaaaatgggttacatcatgtcaggatggtaaagagtggggatgatgcatgcactgttcaccgtaaggtaaaacggcagagcaaacttacgtgtagctaagattgtaggttagggtttgcagcgtatcagccttgaacccattttcatctaaaagaacatgataatgtgttggacggctcgtcccctgtccaaatacaaaagaagaaactattaacactggaggtaaaattatttcaatttcattgcaaagtgaaattgtgatttgttctaccaatcattaccttgataccagaatggctacagaggtaaaagtcaaactcactcggatggcagatcattgtgtcaacaacagttcctaagagaaaaaatgcacttgatgatttaatatttctttttttAaaaaaacttcatacttaatacaatgtgaatattaatattgcataacaaagttacttaccaggaaggatatttccgcttctatccatcatatctcgacgattttctggaaataggcgggtgtgatgccttttctggacaacaacaaatgtaactggaggaaggtagccctcctgcaaactagcacatgcctacgaatacaagcaaaaacaacattgtattatcggcagcatgagatggagaaacaactatatagggataaataggtaagcggaacaaaaaggactttgcctgagataccttgcgaattgcatccatttcataaagcaacacttggctaaactgtccctcgctgataccatctctgcatattgaagaaatcagaattaagcacaggcaaaaaaatgcttttttaaaaaaaataaactcttcacggaccgataaaatataatccggctaggtttctgtccagtttcttggtagaaagacctgagcaactccctgcaatatatacatgttaatacagcgaaaagagagatattcagacatttatttctctagaataacaattacctaatcattccacctctaataattcccttcaatggatctttcacttctgtgtaaagattagatatgatttcttccctatgactttgtgtagataccaagcatttgtactttgtaacttctggccaatccatggatgcaacaacctacaatcattgagaatagaaactttcattcaagaccacacatacaaggtgctaaaaaggataattttttttctaataacaagtcacacaaaagtagaagtgtagaatgtaaatgtttgcaccctaaaggcctaaacacaagccaggcttgttgtagaactaacgcacagtaactactttagtttatccattcttcgtttaatatgcaaaagttagcacaatgctaaaagtccactatccaccaaaaaaaagactgaaacagaaaaaaaaaacaaatataaaaaataatcaaaggctcaaaaagaaaaaaaaaatactatagggctaaataagttccagaatcatcataattctgttagacattgatctaccttaatcagaaaaatcaaacaacacaggttgagcaaaatgtaaaactgtgatatggtgagttggggagagtacacagaccgctgcaatggatggagaagcatcctccccaggagatggatgtgtaacatccgctccaaacactatcgtaggacgatctgtcagaattggtattttcttgtgcaacgcatcttcaagtactgtatttcgccccccgacctaattgcaaaataaaaatgatattaatgtcttttgaactgcttgtagagtggttagtcataccatacaattaaacttcatcctaccttaacattcatttttagggccagattttcaagatactgtttcccacctttctgaagactcttgggtgcacagcattgagttatcacaccaacctctgtttcacaaattcgttttatccttcctacatatgtaatgagtatcagaaacttaaattcaaattgaatcacctgcatgagaatgcatcaagagcttaccataagaaccactaatttcaggcaatattacaattaataactgaagttgctgccctgtcaggtcttgctggtcaagcttttctgaagattgcctatggatatttctgattgcaccctcgatgttgcgttgctgtccttgtatgatatccacacatggtctcgtattcatttgctacaaacagaaatggataaagtcaaccagtgaatattttagtgacaaaagtatacttacaaaaataaatttacggatttctttaaggagtaatttaccatgccaatattattgcacatgccaaccaggtcttcacaaaacatcctaatgtcatttacatgcatccgagaagcaaaagataggcaggtccaatggttgatacatcctccatttaccatcctctgaaaaatctcaggaaaaatgtcaagacggttcgccacaaagagaagatatcaaaccatcaatacaaataacctgaaaaatgtgcttttcatttcaatgtgtcatagcttttacacatttgcttcatttataaacaatgtagtcaaacattattataggcttatagctaccacaaaaaatgagtgtgccctaacaacataagcatcgctcattcacatgcaactgtcaaaacagcagacgatatgacggggtgtttagaaatacaataagaaaaaccttgtgtaataatggtattttctgagttaagtatgcaatagtacattgcaaataaaatggtgcagacggtgagacagagcataccttgttaatcatgttccattgtccaacggaaggattacatactttttctcttccagagtcatgatatttaagctaattataagaggaaaattaaggggttaactgaacatacgagactgaaatgaagcacacaattttaatAaaaaaataagtacataattaaataaaacaataaataaaagatggttatataccctaggggtaggcagtacacgggcatcaaccacggcaagttggttagcgactttgatgccaaattcttttgcacaatcatcattgccataagagttcgtattaacaatctgagaatacaagtaaaatgtttttatcttcaaatcaaacaaaaaaaaataaacatgaaagaacataaaacaaaactatacgaggagactacacctacaccaaagtaaacatggagcaaaattcacctctatgatactgctctccctttgtgcgggtcgttcacatgtcatccttagaatgtttgtaacttgatgctcatttagcttcttcgaataccgttgtccttcaagtatactgcagacctgaagaaaaaacatgctaatagatttatatctactctgtagcaactctgtgaagatgaacaacgaaaggaaaaggaaacctccataggcaaatattttggtctgctatcactgccagcttgaaggcatggccaattaacatgttttaaggagtaattgtactgtttcttaaagtattggacgactgatatcctgtttccatctagatcaaacctgtcaaataagaaaatcagaaaattacttgtaacatattgtactgcaattactgtcttaatggcatggtgtgattcaagtttataaaatgtaatgctgacagaaaatcagaaatgggtcacaaaagaaaaaaggtacatcaattcattcattggagctgagggtattccagtgatcttgtaacgtatggatttctctttccagtgagttgccacaatttggactccttttagggcctttttcagctatgatgcagaagaacaaaacaaaagacagcaataactaattcaggaaacatagaacgaaaaaatagagatgagatgaaatatggcaataagattcaaactttaatacgatcttgatcagacaagcgccttgaaacatctcggatgttcaaatactgaactgcaaagtccatcactggctgggccttgtaaaatgctgttgcagaaatatctaaaaggaaaattcacatcaatatccaacacagaacgtaactgactctgtattgtgaaataaaattaaccgactcctgtatcaattgatggattgaccgttccatcaaatgttgagtatctcgacacaaacatttctatactactaaaatactttgaggtaaatccataccgatatttagcgacagtcccatctgcgtggggcgcagactttggtaataccccctccaacactctgtaccactaccaatctcgccaccatgcccaaatgattgggagaaaaatgaccttgagatagatacatacctgtcacaagtaaaatttacctagttaaaaatattcatgtcgatcaagattctggattaacaggacgcatgcacatatggaatcataaggcatagaagttgatgtaatgaactaattgtacttcatatcatggaaacatcaaatatcaaagaattactgaggtagggcattccctaagagcaatgtcaagagcttgaatagtgtcctgtggcaactccctctgccttccaaccaaaaactgcttaaggctgtacagatctgttttggaggcttgctttatggtcaccttgtattcctcctccctaaaacacaataacaaatattttataaagtcgtcatattaataaaaaaacagttatgagaaaaggagaaggcttcaagtgtttaaccataccgttggttacccctcaaaggattaatgtgcttgacaacaaagtctttggttttgaaaggtagtggacctgcagtatatatgctctttcttccatcatagacaggtaacctaccatccaagaattgtttgtgcaacgcaacaagtttgttgattattgatctatttctctcacgataagttgattctggagtgatcaccacctgtaccaacaaaacatgttgcacttaatcttaagatctttatgatggaaatagttaaacaaattcacttgaatgatactaaaaccaaccacatcacgagtggtgagggaaagaaatgaagctgaaaggagcattcgctgatgattgattaaccaaagaatatatatcatcattatgtatttttttctcacggtgttcctagtttggaaagtccattgcacatctatatatggttgatcatttattttacaccatttcaaaagcatggctaaatgcatgcatgccactagcaactcaatggtaacaaatatagaagttcaaattaaatcgttaagagttaatgtttaacttttaataacatatttaactggccatgtacatccatgtgggatgtagagaccggattgatatccattatctgaaaaacaacatatagtgctaaatttgtggaatttacacttttcctctttcagcaagaagaccaaagcagtcatacaaatttttcattaaaccgaggggtgtttacattgtaaatgagcattttaaataaatttatccaattcaacaatttctctagtgaaatgtcatatttgacatgagagtattattactcaggaaaatgctagaatacatttattaatggtccttaaaacatatcttattcagctattagaaatttgagatgtaaaattaatgtgctatatctatttttaatacattccagattttacacttatattttgatttttcttttttgggaaactttcaaacttgacttgaatttcaggacgaagttgatgtgacatgtagactcgttataatgtgctatagaagcctataccgcttccactttaccagtatatataaacccctaatatcttggatgcatttaaggttagcaagttaaatgcataggtgttttccctttcttaagaggggaaagcacttgagtggggttagagcaagatcttgtgcattcctgttcaaataactttggtactagggtgcaaatgtcagttgattagaacaaacttctttttaattggaaactcaaatttctagccattggatctagatccaatctctttttctctctgctcccaatccataactctccatgctccccttccccaaacccatctatagttaaactctccatgctccacttccccaaacgctagttgccaaacctctccattccacggccgcaaaattttaagggactatctatagatctgttaacagaaaattccacatcccatctttcaaattttggaccattggatgtgctttaaaattcgtgcaaaggcattaaccctagctctcctcccgttcccctcccatcgtgcgtccgcacccctcccatcgctactcctccgctcgatccccgctgcaaccgccccaccacgccgctgcccgcctcaccggctggccggagggcgtcaacggcgccggcgagaccccctccccctccccccaatgatgcatgcccaccgccctcctccagccccgcggcttccggcgccgccgccggcgcctcgccacccgctccaccgcccaccgccgggctgccgcctcccccggccaaccctctaagccggcgaactcctcttccctctccctctcccaccccaccccgggaccctaacccgtagggtcctctatcggagtctagggtgtcgtcggcgccgaagaaggagaaggtcgccggagttggagaagaaggcctggagcacgaatctcggagctcatccggtagcgcaaaatctgcaagatttggggatacaatttctatcggcaggaggttagcaattccgaaattttaacccggtggggctgcctcctcgccgtcaccccctcgccggagaagaataggctcgccggagcacgacgatcctccgagaaaatcccaacagcgagtacaaaaaatgagtactaggagaatggaattagttttcgagtactagtagactagtgctagattagcgatcacaaattcacaatagattacgaaacgagctagcatgcagagacagatgagatatgagatgagattggatgagaaaacgtacgtcgtagtggtagatgtccttgtccgcgacttgcaccaggaaatggttggcgcggacgcggcaccgcctcccgatcgtgccgacgtccggacgcgccgggaaggtcaccgccttgctcgacgacggcggcagcgtcgcgggcgggggcgcgggcgccggtgcggcgacctgagatggctctctcttgacattgtccgtgccctgcgccgccgccaacgacgaaccctggcctgctggcggcgctccacccgacacaaccatcttccccttcatctcgccgcacagagcccccaccgcaaccgccggcgcaggcgccggcactccgacgccgccgcgcccgccgcctacgggtcgacgcgccgccgcattgggctgcacctgcacgccgcctcgtccgccgccgccagatggcggggccggggcgtggaatggctgctgctgctgccgcccagccccggcgcccacagcgacgccgccacggccgcgcggcgcgtcgtgacggcctccgcgctcacccgcccctcgaccaccgccttgccgctcgccgacgacgccgagatcgcccctaccctggccacccctcccgccacctccacctccgcctccttcccgcccaccaccgccgcctcgcccaccgcggcggcctccgccgccgccgccgcgcgaagacat
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| CDS seq | atgtcttcgcgcggcggcggcggcggaggccgccgcggtgggcgaggcggcggtggtgggcgggaaggaggcggaggtggaggtggcgggaggggtggccagggtaggggcgatctcggcgtcgtcggcgagcggcaaggcggtggtcgaggggcgggtgagcgcggaggccgtcacgacgcgccgcgcggccgtggcggcgtcgctgtgggcgccggggctgggcggcagcagcagcagccattccacgccccggccccgccatctggcggcggcggacgaggcggcgtgcaggtgcagcccaatgcggcggcgcgtcgacccgtaggcggcgggcgcggcggcgtcggagtgccggcgcctgcgccggcggttgcggtgggggctctgtgcggcgagatgaaggggaagatggttgtgtcgggtggagcgccgccagcaggccagggttcgtcgttggcggcggcgcagggcacggacaatgtcaagagagagccatctcaggtcgccgcaccggcgcccgcgcccccgcccgcgacgctgccgccgtcgtcgagcaaggcggtgaccttcccggcgcgtccggacgtcggcacgatcgggaggcggtgccgcgtccgcgccaaccatttcctggtgcaagtcgcggacaaggacatctaccactacgacgtggtgatcactccagaatcaacttatcgtgagagaaatagatcaataatcaacaaacttgttgcgttgcacaaacaattcttggatggtaggttacctgtctatgatggaagaaagagcatatatactgcaggtccactacctttcaaaaccaaagactttgttgtcaagcacattaatcctttgaggggtaaccaacgggaggaggaatacaaggtgaccataaagcaagcctccaaaacagatctgtacagccttaagcaagggagttgccacaggacactattcaagctcttgacattgctcttagggaatgccctacctcagtatgtatctatctcaaggtcatttttctcccaatcatttgggcatggtggcgagattggtagtggtacagagtgttggagggggtattaccaaagtctgcgccccacgcagatgggactgtcgctaaatatcgatatttctgcaacagcattttacaaggcccagccagtgatggactttgcagttcagtatttgaacatccgagatgtttcaaggcgcttgtctgatcaagatcgtattaaactgaaaaaggccctaaaaggagtccaaattgtggcaactcactggaaagagaaatccatacgttacaagatcactggaataccctcagctccaatgaatgaattgatgtttgatctagatggaaacaggatatcagtcgtccaatactttaagaaacagtacaattactccttaaaacatgttaattggccatgccttcaagctggcagtgatagcagaccaaaatatttgcctatggaggtctgcagtatacttgaaggacaacggtattcgaagaagctaaatgagcatcaagttacaaacattctaaggatgacatgtgaacgacccgcacaaagggagagcagtatcatagagataaaaacattttacttgtattctcagattgttaatacgaactcttatggcaatgatgattgtgcaaaagaatttggcatcaaagtcgctaaccaacttgccgtggttgatgcccgtgtactgcctacccctaggcttaaatatcatgactctggaagagaaaaagtatgtaatccttccgttggacaatggaacatgattaacaagaggatggtaaatggaggatgtatcaaccattggacctgcctatcttttgcttctcggatgcatgtaaatgacattaggatgttttgtgaagacctggttggcatgtgcaataatattggcatgcaaatgaatacgagaccatgtgtggatatcatacaaggacagcaacgcaacatcgagggtgcaatcagaaatatccataggcaatcttcagaaaagcttgaccagcaagacctgacagggcagcaacttcagttattaattgtaatattgcctgaaattagtggttcttatggaaggataaaacgaatttgtgaaacagaggttggtgtgataactcaatgctgtgcacccaagagtcttcagaaaggtgggaaacagtatcttgaaaatctggccctaaaaatgaatgttaaggtcggggggcgaaatacagtacttgaagatgcgttgcacaagaaaataccaattctgacagatcgtcctacgatagtgtttggagcggatgttacacatccatctcctggggaggatgcttctccatccattgcagcggttgttgcatccatggattggccagaagttacaaagtacaaatgcttggtatctacacaaagtcatagggaagaaatcatatctaatctttacacagaagtgaaagatccattgaagggaattattagaggtggaatgattagggagttgctcaggtctttctaccaagaaactggacagaaacctagccggattatattttatcgagatggtatcagcgagggacagtttagccaagtgttgctttatgaaatggatgcaattcgcaaggcatgtgctagtttgcaggagggctaccttcctccagttacatttgttgttgtccagaaaaggcatcacacccgcctatttccagaaaatcgtcgagatatgatggatagaagcggaaatatccttcctggaactgttgttgacacaatgatctgccatccgagtgagtttgacttttacctctgtagccattctggtatcaaggggacgagccgtccaacacattatcatgttcttttagatgaaaatgggttcaaggctgatacgctgcaaaccctaacctacaatcttagctacacctatgcccgatgcacccgagcagtctccatagttcctccagcatactatgcgcatctgggagccttccgagcacgctactacatggaggacgagcattctgatcagggctcttcttcctccgtaacgacgcgaacggatcgatcgacgaagccgcttcctgaaatcaaggagaatgttaagcggttcatgttctactgctga
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| Protein seq | MSSRGGGGGGRRGGRGGGGGREGGGGGGGGRGGQGRGDLGVVGERQGGGRGAGERGGRHDAPRGRGGVAVGAGAGRQQQQPFHAPAPPSGGGGRGGVQVQPNAAARRPVGGGRGGVGVPAPAPAVAVGALCGEMKGKMVVSGGAPPAGQGSSLAAAQGTDNVKREPSQVAAPAPAPPPATLPPSSSKAVTFPARPDVGTIGRRCRVRANHFLVQVADKDIYHYDVVITPESTYRERNRSIINKLVALHKQFLDGRLPVYDGRKSIYTAGPLPFKTKDFVVKHINPLRGNQREEEYKVTIKQASKTDLYSLKQGSCHRTLFKLLTLLLGNALPQYVSISRSFFSQSFGHGGEIGSGTECWRGYYQSLRPTQMGLSLNIDISATAFYKAQPVMDFAVQYLNIRDVSRRLSDQDRIKLKKALKGVQIVATHWKEKSIRYKITGIPSAPMNELMFDLDGNRISVVQYFKKQYNYSLKHVNWPCLQAGSDSRPKYLPMEVCSILEGQRYSKKLNEHQVTNILRMTCERPAQRESSIIEIKTFYLYSQIVNTNSYGNDDCAKEFGIKVANQLAVVDARVLPTPRLKYHDSGREKVCNPSVGQWNMINKRMVNGGCINHWTCLSFASRMHVNDIRMFCEDLVGMCNNIGMQMNTRPCVDIIQGQQRNIEGAIRNIHRQSSEKLDQQDLTGQQLQLLIVILPEISGSYGRIKRICETEVGVITQCCAPKSLQKGGKQYLENLALKMNVKVGGRNTVLEDALHKKIPILTDRPTIVFGADVTHPSPGEDASPSIAAVVASMDWPEVTKYKCLVSTQSHREEIISNLYTEVKDPLKGIIRGGMIRELLRSFYQETGQKPSRIIFYRDGISEGQFSQVLLYEMDAIRKACASLQEGYLPPVTFVVVQKRHHTRLFPENRRDMMDRSGNILPGTVVDTMICHPSEFDFYLCSHSGIKGTSRPTHYHVLLDENGFKADTLQTLTYNLSYTYARCTRAVSIVPPAYYAHLGAFRARYYMEDEHSDQGSSSSVTTRTDRSTKPLPEIKENVKRFMFYC |
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| Function | Protein argonaute 12 [UniProtKB/Swiss-Prot:Q7Y001] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_03g0029920 | OsKeNa_03g0029920.01 | Chr03 | 28200737 | 28208681 | - | NAM | ||
| CDS seq | atgtcttcgcgcggcggcggcggcggaggccgccgcggtgggcgaggcggcggtggtgggcgggaaggaggcggaggtggaggtggcgggaggggtggccagggtaggggcgatctcggcgtcgtcggcgagcggcaaggcggtggtcgaggggcgggtgagcgcggaggccgtcacgacgcgccgcgcggccgtggcggcgtcgctgtgggcgccggggctgggcggcagcagcagcagccattccacgccccggccccgccatctggcggcggcggacgaggcggcgtgcaggtgcagcccaatgcggcggcgcgtcgacccgtaggcggcgggcgcggcggcgtcggagtgccggcgcctgcgccggcggttgcggtgggggctctgtgcggcgagatgaaggggaagatggttgtgtcgggtggagcgccgccagcaggccagggttcgtcgttggcggcggcgcagggcacggacaatgtcaagagagagccatctcaggtcgccgcaccggcgcccgcgcccccgcccgcgacgctgccgccgtcgtcgagcaaggcggtgaccttcccggcgcgtccggacgtcggcacgatcgggaggcggtgccgcgtccgcgccaaccatttcctggtgcaagtcgcggacaaggacatctaccactacgacgtggtgatcactccagaatcaacttatcgtgagagaaatagatcaataatcaacaaacttgttgcgttgcacaaacaattcttggatggtaggttacctgtctatgatggaagaaagagcatatatactgcaggtccactacctttcaaaaccaaagactttgttgtcaagcacattaatcctttgaggggtaaccaacgggaggaggaatacaaggtgaccataaagcaagcctccaaaacagatctgtacagccttaagcaagggagttgccacaggacactattcaagctcttgacattgctcttagggaatgccctacctcagtatgtatctatctcaaggtcatttttctcccaatcatttgggcatggtggcgagattggtagtggtacagagtgttggagggggtattaccaaagtctgcgccccacgcagatgggactgtcgctaaatatcgatatttctgcaacagcattttacaaggcccagccagtgatggactttgcagttcagtatttgaacatccgagatgtttcaaggcgcttgtctgatcaagatcgtattaaactgaaaaaggccctaaaaggagtccaaattgtggcaactcactggaaagagaaatccatacgttacaagatcactggaataccctcagctccaatgaatgaattgatgtttgatctagatggaaacaggatatcagtcgtccaatactttaagaaacagtacaattactccttaaaacatgttaattggccatgccttcaagctggcagtgatagcagaccaaaatatttgcctatggaggtctgcagtatacttgaaggacaacggtattcgaagaagctaaatgagcatcaagttacaaacattctaaggatgacatgtgaacgacccgcacaaagggagagcagtatcatagagataaaaacattttacttgtattctcagattgttaatacgaactcttatggcaatgatgattgtgcaaaagaatttggcatcaaagtcgctaaccaacttgccgtggttgatgcccgtgtactgcctacccctaggcttaaatatcatgactctggaagagaaaaagtatgtaatccttccgttggacaatggaacatgattaacaagaggatggtaaatggaggatgtatcaaccattggacctgcctatcttttgcttctcggatgcatgtaaatgacattaggatgttttgtgaagacctggttggcatgtgcaataatattggcatgcaaatgaatacgagaccatgtgtggatatcatacaaggacagcaacgcaacatcgagggtgcaatcagaaatatccataggcaatcttcagaaaagcttgaccagcaagacctgacagggcagcaacttcagttattaattgtaatattgcctgaaattagtggttcttatggaaggataaaacgaatttgtgaaacagaggttggtgtgataactcaatgctgtgcacccaagagtcttcagaaaggtgggaaacagtatcttgaaaatctggccctaaaaatgaatgttaaggtcggggggcgaaatacagtacttgaagatgcgttgcacaagaaaataccaattctgacagatcgtcctacgatagtgtttggagcggatgttacacatccatctcctggggaggatgcttctccatccattgcagcggttgttgcatccatggattggccagaagttacaaagtacaaatgcttggtatctacacaaagtcatagggaagaaatcatatctaatctttacacagaagtgaaagatccattgaagggaattattagaggtggaatgattagggagttgctcaggtctttctaccaagaaactggacagaaacctagccggattatattttatcgagatggtatcagcgagggacagtttagccaagtgttgctttatgaaatggatgcaattcgcaaggcatgtgctagtttgcaggagggctaccttcctccagttacatttgttgttgtccagaaaaggcatcacacccgcctatttccagaaaatcgtcgagatatgatggatagaagcggaaatatccttcctggaactgttgttgacacaatgatctgccatccgagtgagtttgacttttacctctgtagccattctggtatcaaggggacgagccgtccaacacattatcatgttcttttagatgaaaatgggttcaaggctgatacgctgcaaaccctaacctacaatcttagctacacctatgcccgatgcacccgagcagtctccatagttcctccagcatactatgcgcatctgggagccttccgagcacgctactacatggaggacgagcattctgatcagggctcttcttcctccgtaacgacgcgaacggatcgatcgacgaagccgcttcctgaaatcaaggagaatgttaagcggttcatgttctactgctga
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| Protein seq | MSSRGGGGGGRRGGRGGGGGREGGGGGGGGRGGQGRGDLGVVGERQGGGRGAGERGGRHDAPRGRGGVAVGAGAGRQQQQPFHAPAPPSGGGGRGGVQVQPNAAARRPVGGGRGGVGVPAPAPAVAVGALCGEMKGKMVVSGGAPPAGQGSSLAAAQGTDNVKREPSQVAAPAPAPPPATLPPSSSKAVTFPARPDVGTIGRRCRVRANHFLVQVADKDIYHYDVVITPESTYRERNRSIINKLVALHKQFLDGRLPVYDGRKSIYTAGPLPFKTKDFVVKHINPLRGNQREEEYKVTIKQASKTDLYSLKQGSCHRTLFKLLTLLLGNALPQYVSISRSFFSQSFGHGGEIGSGTECWRGYYQSLRPTQMGLSLNIDISATAFYKAQPVMDFAVQYLNIRDVSRRLSDQDRIKLKKALKGVQIVATHWKEKSIRYKITGIPSAPMNELMFDLDGNRISVVQYFKKQYNYSLKHVNWPCLQAGSDSRPKYLPMEVCSILEGQRYSKKLNEHQVTNILRMTCERPAQRESSIIEIKTFYLYSQIVNTNSYGNDDCAKEFGIKVANQLAVVDARVLPTPRLKYHDSGREKVCNPSVGQWNMINKRMVNGGCINHWTCLSFASRMHVNDIRMFCEDLVGMCNNIGMQMNTRPCVDIIQGQQRNIEGAIRNIHRQSSEKLDQQDLTGQQLQLLIVILPEISGSYGRIKRICETEVGVITQCCAPKSLQKGGKQYLENLALKMNVKVGGRNTVLEDALHKKIPILTDRPTIVFGADVTHPSPGEDASPSIAAVVASMDWPEVTKYKCLVSTQSHREEIISNLYTEVKDPLKGIIRGGMIRELLRSFYQETGQKPSRIIFYRDGISEGQFSQVLLYEMDAIRKACASLQEGYLPPVTFVVVQKRHHTRLFPENRRDMMDRSGNILPGTVVDTMICHPSEFDFYLCSHSGIKGTSRPTHYHVLLDENGFKADTLQTLTYNLSYTYARCTRAVSIVPPAYYAHLGAFRARYYMEDEHSDQGSSSSVTTRTDRSTKPLPEIKENVKRFMFYC
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.203730 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0682200 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g47820 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0682200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0030190 | RBH | 0.0 | 0.0 | 0.404986 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0029930 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0029980 | RBH | 0.0 | 0.0 | 0.979429 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0030050 | RBH | 0.043256 | 0.423576 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0029780 | RBH | 0.0 | 0.000000 | 1.086800 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0469000 | RBH | 0.037783 | 0.138622 | 0.0955135 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0029500 | RBH | 0.0 | 0.0 | 0.235664 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0469800 | RBH | 0.0049375 | 0.206007 | 0.032896 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0029810 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0029890 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0029850 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0029670 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0029620 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G029640 | RBH | 0.0 | 0.0 | 0.495288 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0029570 | RBH | 0.0 | 0.0 | 1.660056 |
