Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_03g0027660 | OGI:03070990 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr03:25912632-25921589 | ||||||||
| Gene Symbol | RLCK99, OsRLCK99, - | ||||||||||
| DNA seq | atggagagcctgtccatcctggacctgagctggaacagcctcgccggcggcttgccggcggcgctggggagcctgaggatgctggagaaggccgacctgagccacaacgagctcgccgggagggtgccggcggaggtcgggtcgctgcgggagctggtgttcctggacctgagccacaacgagctcgccgggccgctgccggcgtcgatggccgggctggggaagctgcagtacctgctcctgcaggagaaccccatcggcacggcggtgccggcggcggtggtcgggtcgctccggcggctgcaggtggtgggcatgtccgggtgcggcctgacggggccgatcccgcgcggcgcgttcgccgcgctggccagcctggcggcgctgtcgctcgaccggaacaggctcgacgggccgatcccggcgagcctcgccgcgctgccgcggctggggcggctcaacctgagccagaaccggctggccggggagatcgcgctgccggcggagttcgtggcgcggctgggcaggcgcctcgacgtgcggggcaacgacgagctgtgcgtcggccggggaaggtacggcggcgcgcaggcgagctacctgggcgcgccgccgtgcgctgcggctggcggtggctcgggggcagccgtaggagggacgtcgtcgtctccggtggagagctccgccggcgccgcggcgacggccggccgtggcttccgggtttacgggatcgctgggatgttcggcggcatggtgtaccaccttcttacgctgtctcttgtattccattttatgatacgatattttaattgttgcaattaatgaatgggtcttagcccactcaaagattaattctttagaaaatcacaaaagcccatctcatgggatggcatgcatgtggagtttagtaccaccttgcttattctaggagagggggacctccttaaaagggaggatgccctcctagccacttgaagcatgtgtggtggagagaagaggggaaacacacgcgctcgctcgcctcgcctggcctggcagggcaggcggcgcgcgtgcatgacgtacgcgtcgaatggtccgaaaaattggctcctcacccttgcgcagatgcagcctccttttgcagttttgttttgctgcaaatgcgccgtcgctcgtagactactccatcccgctcgccggcgtgcaccagcgatcgggagagcaggtcttccttttgcagttttgttttgctgcaaatgcgccgtcgctcgtagactactccatcccgctcgccggcgtgcaccaacgatcgggagagcaggtctccggaacctctgcctttgacgtcctgcaccgggagaaggcggcaataaggtttttgggaagcgcttcgcgcgactgctccctgttcgttcgcgacggctcgccttcctcttcgctcgcgtgtttcgtgccttcgtagacacctgcgaaaagtttcgaccaagcagccggtcttttcgtcacctcggtacgtgttcaatatgttgcgcatatttgatctgttcatgttattctgcgtagtttacatgtgtagatctaatgatgcgttcatgctagttttcatctgtaatgtcatgatttatttatggaataaattaaatcattatatgcccataatctcaacaatccaaaaaccttatcataggcactgtgattttactatggctggttttgccgatgcactgaggccggataaattcaccggtgtgcattttaagagatggcagatcagggtcactctgtcgctgacagctatgaaatgcttctgggtgagtactggcaaacctgaacgagttcttactgctgaacagcagaagcaattcgaggaagccactactctctttgtgggatgcattcttagcgttcttggcgatcgtctggtcgagatgtatatgcatatgaccgacgctaaggagttgtgggatgcactgaatactaaattcggtgctactgatgctagcaataatctgtatatcatggagcagtttcatgactacaaaatggctgacaaccgttctgtagtcgaacaggctcatgagatacaaaccatggctaaggaactcgaactccttaagtgtgtcttacccgacaaatttgtggccgggtgcattattgcaaaactacctccatcttggaggagtttcggtactgcactcaaacacaagagacaggaatactccgttgaggggttgattgcgtctcttgatgttgaggagaaagctcgggaaaaagatgccgcgtctaagggcgatggtgggcagtccagtgccaatgttgtgcacaaggcccagaacaagagcaaggggaaatacaaagctcagcagaccaccaacttcaagaagcagaagaagaacaacaacaatcctaatcaggatgagaggacttgctttgtgtgtggccaagttggtcatctggctaggaagtgtccacagcgcaaggggatgaaggcacctgcagggcagacttctaagtctgctaatgtgaccattggcaacactggagatggaagcgggtcgcacggggttccaccgtcctaatggggaatgggtcacatgcttctgttcatggtgttggcacggtagatctgaagtttacttcgggaaagatcgtgcagctgaagaacgtgcagcatgtcccttctatcgacaggaatcttgttagtggctcccgtctgactagagacggatttaagttggtttttgagtctaataaagtagtcgtgtctaaacatggatattttattggtaaaggttatgagtgcggaggcctgttccgcttttccctttctgatttctgcaataagtctgtgaaccatatttgtggcagtgtggatgatgaggctaatgtttggcattcacgtttatgtcatattaattttggcttgatgtctcggctttccagcatgtgtttaattcctaagttttccattgtcaaaggttctaagtgccatagttgtgtgcaatcgaagcaacctcgcaagcctcacaaggctgccgaggagagaaacttggcaccactagaactcctacattcagatctttgtgaaatgaatggggtgttgacgaagggtggaaaacgatatttcatgacattgattgatgatgctactagattttgctatgtgtacttgttgaaaacgaaagacgaggctatagactattttaaaatttataaggcagaagttgaaaatcaacttgacagaaagataaaaaggcttaggtctgatcgtggtggagagtttttctcgaacgagtttgacttattctgtgaggaacatggcatcatacatgagaggacgcctccctattctcccgtctaatgggattgctgaaaggaagaaccgcacactgactgacttggtgaatgccatgttggacaccgcgggactgcctaaggcatggtggggggaggcattgttgacctcaaatcatgtgttaaacagagttcctaacagaaataaggacaaaacaccatatgagatatggattggtagaaaaccatcactttcttatttgcgcacatgggggtgcttgacgaaagtcaatgtaccaataacgaagaagcgcaaacttggacctaagactgtggactgtgtttttctgggatatgctcatcatagcattgcctatagatttttaatagttaaatccgaggtaccggacatgcatgttggtacaattatggagtctcgtgatgctaccttctttgagagctttttcccaatgaaggatacacatagtggttcgaaccaaccctctgaaataattcccagttcaatcacaccaccagaacaaactgaacatacacatgaacttgtctctgaggaggatgtcagtgaagctcctcgaaggagtaagagacaaaggacggctaagtcttttggtgatgatttcactgtgtacctcgtggatgacactcctaagtcaatttcagaagcatatgcatctcgtgatgcagactactggaaggaggctgtccgtagtgaaatggattccattatcgctaacgggacttgggaggtgacagagcgaccctatgggtgtaaacctgtggggtgcaagtgggtgttcaagaagaagcttaggcctgacggtactattgaaaagtacaaggctcggcttgttgctaagggctatactcagaaagaaggcgaagatttctttgacacttactcacctgttgctagattgaccacaattcgtgtgctactttccctagcagcctcacatggtcttctcgttcatcaaatggacgttaagacagcttttcttaatggagagctggatgaggagatctatatggatcaacctgatgggtttgtagttgaaggtcaagaaggcaaagtgtgcaaattgttgaagtctttgtatggtctgaaacaagctcctaagcaatggcatgagaaatttgacaaaacattgacatctgcaggctttgcagtcaatgaggcagataaatgtgtgtactatcgccatggtgggggtgagggagttattttgtgcttgtatgttgacgacatactgatatttgggacaaaccttgaggtgataaatgaggttaaatcattcttgtctcaaaattttgatatgaaagatttgggagtagctgatgttatcttaaacattaagctaattagaggtgagaatgggattacactcttgcagtcccattatgtggagaagatcttgaatcgctttggctacattgatagtaagccttctccaacaccttatgatcctagcttgttgcttcgcaagaacaagagaattgctaggaatcaactggaatactcccaaatcattggctcgttgatgtacctggctagtgcaactaggcctgatatctcctttgctgtgagcaagttgagccgatttacctctaatccgggagatgatcactggcgtgcgcttgagcgagtaatgcgctatctgaaaggtactgtggaattggggcttcactatactgggtatcctgcggtactggagggttatagtgattctaactggatctctgatgtggatgagatcaaagccactagtggatatgttttcacactgggtggtggtgctgtttcatggaggtcttgcaaacagacaattttgacgaggtcaaccatggaagcagagctaacggcactggatactgctactgttgaggcagaatggctgcgtgatctattaatggatctgcctgttgttgaaaaaccggtgccggctatccttatgaactgtgacaatcaaacggtaattgtcaaagtgaatagttctaaggataatatgaaatcgtctagacatgtgaaaagacgattgaagtctgtcaggaaattaagaaactccggagttataacgttggattacatccaaacagcgagaaacctggcagatcccttcacgaagggactatcacgaaatgtgatagacaatgcatcgaaggagatgggtttgagacccatgtgagttatactatggtggtaacccagtctatgtgatcggagatcccgtgaattagatcctgggaagaacaaaccattaataaactagaggagagtaccaatatatataccctatccaagtgaagatgcatatactctcgtgagctgcaaggcaggttggctatgccttaatgagttctgttggctttaattagcaaagatgttgtcctgcagagcattcttgaaggaactcacctttgtgagcttgactgttggtcgcagtctatgaagattttgggtgaatcttctaggaagctgacggagcttggggctcctcaccgggagaccgcgcaggcccccctttgccggttcggccgggggccctgggtgagattctaagctcctagtctgtgtgtggaaggttcgcgagagtggaaaaagcacaagacacgggcgatgtatacaggttcgggccgctgagaagcgtaataccctactcctgtgttttggtggatctgtgtatgaagaagctacaaagtgcgagccagcccccgatcgttctgggatcgtttcctcccgtctctaagtgggcaaggtcctccttttatatctcaaggggataccacatgcaccatctctccctctctttcttttgtgtggggactcatcctctcctccctccaacttcacttctcttcattaatggacggagatttgtatggctgccgtccgaatgaccttctgatgggacggcctatacctacctccacttccgccggaagcaggcgcgacgtgggaacatggctgtctgctgatgacatgaccattgtcagaccggtcataaaccggtcattcttgtccaccacgtgtcagtttaacaatctgcatgtttgcccttcttcatacaatatcttgcctgtaatggttaggatgaagcctggtatatatctgaccggaaccaacgtgccatctccaggagctaacacgccggctccggctagggacgagtgcttggaggctctcgtcctgacgggatggggcgaggcgtgcgtcagaccgcctgtcgccacctaacccacgatctgaccggtctgagaccggtcacagaccggataaacgagcgtgccatactgcgctacatgtggcgtgacgcgctcgtccaaaccgcaataaatgcggttaggtgagccccgctatgctcacctaccccatatacgcggcgcaaaacccacaaggggtcagggcgcctcggccctcggggccgaggcgggagcggtccgaccccctcggggagacaaagaggagggcgaacacatcaccctcgggcccgacgccccccgagggtgccaggccacgtgggcgattgtgtctgcctcaagcctctagtcatgatactcccggtcccatgtcaccgacagaagcttactaaagacctaggagtatgacttatacgctccacccgaggggtagtctacagacggtctagtaccagataagactttgagtgaaacttgcttgcacaagacttgcaattcaaggcgtagtccattgttcaagttgtgagtaagtgtagcttggagttctaggtggatgttcaaccttaattggtctccatcgaaccgctggtatataaacagtacattggaaaaggcaaatctcagtgggattttgagatttggtgggggattgttggaattaatgaatgggccttagcccactcgaagattaattctttggaaaatcacaaaagcccacctcatgggatggcatgcatgtggagtttagtaccaccttgcttattctaggagagggggacctccttaaaagggaggatgccctcctagctacttgaagcatgtgtggtggagagaagaggggaaacacgcgcgcgctcgctcgcctcgcctggcctggcagggcaggcggcgcgcgtgcacgacgtacgcgtcgaatggtccgaaaaattggctcctcacccttgcgcagatgcagcctccttttgcagttttgttttgctgcaaattcggattcgtttttgttttggaaacgttccgaaaaatccggtgcgtgcaaacggcgtggagtccggataagttacgcgcgacttatccggttcgattacgcgcagtagagatcgtgcgggcgccctgatcaagcgacccttctctatataaaccgacccgccgtcttcacgcaatatatgcgaaaatcaatctagggtttgcctcctactctgtactgcgccgtcgctcgtagactactccatcccgctcgccggcgtgcaccagcgatcgggagagcaggtctccggaacctctgcctttgacgtcctgcaccgggagaaggcggcaataaggtttttgggaagcgcttcgcgcgactgctccctgttcgttcgcgacggctcgccttcctcttcgctcgcgtgtttcgtgccttcgtagacacctgcgaaaagtttcgaccaagcagccggtcttttcgtcacctcggtacgtgttcaatatgttgcgcatatttgatctgttcatgttattctgcgtagtttacatgtgtagatctaatgatgcgttcatactagttttcatctgtaatgtcatgatttatttatggaataaattaaatcattatatgcccataatctcaacattaataagtctgtaaaaagaccgtggttctgtaatgtttataatttttttatataagatggacaatcaaacgttagacatagaaatccataaccgtgcttaaaataggagtgagttagtagttttgaatttggcgagatagtaaataatattattttgatagatatggtaaggggactgctatttagcgaactagcgcacactatttttcttaattcttcaaactttcggaattgctattcgtagcaagaaaattagagaagaaagttttgaattttcggccatcaaatccgcattgagatttgtgcacacgatgggaattaaaaatagatcaagagcgtcgggggaggaggctattgcgccaccgttcgtgcgaccacgtcgtgcgcgaacacgttctccaagcgttttccctttcgtagtgatgtcataggtgctcctcacgcgattttttttgtctacttttatgcgtttccaggcccatagaaagaaacttctgacccataaggagaaaacatttccactaatcaatcaaaaacttcttactccctccgtttcacaatataagttatttcagcatttttcacattcatattgatgttaatgaatctaaacatatatatttatttaagattcattaacatcaatatgaatgtgggaaatgcacattgtgaaacggaggaagtaactagtaggacctataactttcacaattttaagggagttatcctttactttctgtgagggggtaaatagggataataaataggtcgggagttagttttcaactagtatgaataaaactttcaaaggtgataaaaagtacttttgacatcaaagatccgtaacttttaa
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| CDS seq | atggagagcctgtccatcctggacctgagctggaacagcctcgccggcggcttgccggcggcgctggggagcctgaggatgctggagaaggccgacctgagccacaacgagctcgccgggagggtgccggcggaggtcgggtcgctgcgggagctggtgttcctggacctgagccacaacgagctcgccgggccgctgccggcgtcgatggccgggctggggaagctgcagtacctgctcctgcaggagaaccccatcggcacggcggtgccggcggcggtggtcgggtcgctccggcggctgcaggtggtgggcatgtccgggtgcggcctgacggggccgatcccgcgcggcgcgttcgccgcgctggccagcctggcggcgctgtcgctcgaccggaacaggctcgacgggccgatcccggcgagcctcgccgcgctgccgcggctggggcggctcaacctgagccagaaccggctggccggggagatcgcgctgccggcggagttcgtggcgcggctgggcaggcgcctcgacgtgcggggcaacgacgagctgtgcgtcggccggggaaggtacggcggcgcgcaggcgagctacctgggcgcgccgccgtgcgctgcggctggcggtggctcgggggcagccgtaggagggacgtcgtcgtctccggtggagagctccgccggcgccgcggcgacggccggccgtggcttccgggtttacgggatcgctgggatgttcggcggcatgatccgtaacttttaa
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| Protein seq | MESLSILDLSWNSLAGGLPAALGSLRMLEKADLSHNELAGRVPAEVGSLRELVFLDLSHNELAGPLPASMAGLGKLQYLLLQENPIGTAVPAAVVGSLRRLQVVGMSGCGLTGPIPRGAFAALASLAALSLDRNRLDGPIPASLAALPRLGRLNLSQNRLAGEIALPAEFVARLGRRLDVRGNDELCVGRGRYGGAQASYLGAPPCAAAGGGSGAAVGGTSSSPVESSAGAAATAGRGFRVYGIAGMFGGMIRNF |
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| Function | Receptor like protein 29 [UniProtKB/Swiss-Prot:Q9SJH6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_03g0027660 | OsKeNa_03g0027660.01 | Chr03 | 25912632 | 25921589 | + | NAM | ||
| CDS seq | atggagagcctgtccatcctggacctgagctggaacagcctcgccggcggcttgccggcggcgctggggagcctgaggatgctggagaaggccgacctgagccacaacgagctcgccgggagggtgccggcggaggtcgggtcgctgcgggagctggtgttcctggacctgagccacaacgagctcgccgggccgctgccggcgtcgatggccgggctggggaagctgcagtacctgctcctgcaggagaaccccatcggcacggcggtgccggcggcggtggtcgggtcgctccggcggctgcaggtggtgggcatgtccgggtgcggcctgacggggccgatcccgcgcggcgcgttcgccgcgctggccagcctggcggcgctgtcgctcgaccggaacaggctcgacgggccgatcccggcgagcctcgccgcgctgccgcggctggggcggctcaacctgagccagaaccggctggccggggagatcgcgctgccggcggagttcgtggcgcggctgggcaggcgcctcgacgtgcggggcaacgacgagctgtgcgtcggccggggaaggtacggcggcgcgcaggcgagctacctgggcgcgccgccgtgcgctgcggctggcggtggctcgggggcagccgtaggagggacgtcgtcgtctccggtggagagctccgccggcgccgcggcgacggccggccgtggcttccgggtttacgggatcgctgggatgttcggcggcatgatccgtaacttttaa
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| Protein seq | MESLSILDLSWNSLAGGLPAALGSLRMLEKADLSHNELAGRVPAEVGSLRELVFLDLSHNELAGPLPASMAGLGKLQYLLLQENPIGTAVPAAVVGSLRRLQVVGMSGCGLTGPIPRGAFAALASLAALSLDRNRLDGPIPASLAALPRLGRLNLSQNRLAGEIALPAEFVARLGRRLDVRGNDELCVGRGRYGGAQASYLGAPPCAAAGGGSGAAVGGTSSSPVESSAGAAATAGRGFRVYGIAGMFGGMIRNF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0145102 | SBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g44270 | RBH | 0.0 | 0.072711 | 0.066324 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0145102 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0027920 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0021240 | RBH | 0.247397 | 1.365595 | 0.643929 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0027710 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0027750 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0027490 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0433400 | SBH | 0.0442755 | 0.0511185 | 0.069508 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0027240 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0436100 | RBH | 0 | 0.0212765 | 0.1203825 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0027520 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0027580 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0027630 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0027410 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0027330 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G027380 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0027390 | RBH | 0.0 | 0.0 | 0.0 |
