Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_03g0012330 | OGI:03024680 | 14/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr03:9295150-9302833 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | agggctagacgagaaaagcccccccatccgcctcctcctcctcccccaaattcctctgcttcccccggcggcaagaccgaagcctcgccaccatccgcggcggccgcaatggcgctcacctcccagagcctcttcttctccccgctggccgccggcccatcccggagagtccgggggcggggccgctccacctccgtgtcagccgccgcctccgcctcgtcgcacaactcgcagccccacggccacccccaacaacccctcgccgtcgcgtcgtccagctccaaatccgaatctaagggctcgaaaaccttcgccctcgcctccgccatcactgccgccgcctctggtgcattccttctcgcgtcatctggtggcgggttcgggggcggcgccgggggtcctctcggcggtggaggcggtggatggggcaccggaggaggaggaggtggtggtggtggtggcggcggcggcgggttctggtcgcggatcttctccggcggcgcggcgcacgcggatgagaagtcgtcgggggattgggacccgcacgggctcccggcaaacatcaacgtgccgatgacgaagctgagcgggctgaagaggtacaagatctccgagctcaagttcttcgaccgcgccgcgggagggggaggcgcgttcacggggcccgaggattccttcttcgagatggtgacgctgcagcccggcggcgtgtacaccaagtcgcagcttctgaaggagctcgagacgctcgtgtcctgtggcatgttcgagagggtcgacctcgaggggaaggccaagcccgatggcacccttggcctcaccgtgtcttttgtcgagagcgtgtggagcgctgctaagcagttcaagtgcatcaatgtggggctaatgtcgcagtcgggccaggttgacttcgaccaggacatgacagagagggagaagatggattacctccggaagcaggagcgtgattaccagcagcgtgttcgtggtgccaagccgtgcatattgccagataacgtgcgtggggaggtgctaggaatgatgaagaagcaggagaaggtgagcgctaggctcctgcagaggatcagggaccatgtccagaaatggtaccacaatgaggggttcgtctgcgcccaggtggtgaactttggaaacctaaacaccagtgaggttgtttgcgaggtggtcgagggggatataaccaaagtggagtaccagttccaggataagcttggaaattttgttgaggggaatacccaaattcctatcatagacagggagctcccacagcaggtataccaaataccgctagctgctatagttaatacgagaatataattttgttcccatctttgaattttcttagtgattcatataactagatcatgtgtttaggaaggtataagcgataatttgaataccctgccacatagtgattactttggattctggttgtagcacggaattcttttagtgccactatacaattttatcgccatgttgattctagaaaagcagtagcatgtacccctttcatgacatgtgggatgattttgtgccatgaaaaagcctgaagttaaacgtttactacatacttcttgccactgttagtgattagttgcagatatgtgggtcttgaagaaaaaagtatatttcttattctgaatgtgatatattagtgttttcagtaacttgtacctctgtatcctgcagcttcgacctggccatatctttaacattggagcagggaagcaagctctgaagaatataaattcacttgctttattctccaatatagaggtgaatccacgccctgatgaaacaaaagaagggggcattgtggttgaaatcaagcttaaagaattagaaccgaagtcagctgaagtaagtacagagtggagcatcgtacctggacgtgaaggccgaccaactctggtaatttacctactgtggagccaacattttattcttctctaatctttattttaacaacaccgttccaatccatccctaccaacacgtatgacgtatctgatggcaattattttaggcatccattcaacctggaggaactgtgtcatttgagcaccggaacatctatggtctaaacagatccattgttggttctgttacatccagcaacctgctcaaccctcaggtcagttcgtgattaatgttctcttcacttggttatctttttttttctttttgttactgttagataaacataatttttgtaggtttagacaagtgttatggtgttatcagttgtaagagggacaatattggttcgtgctggtttgattacttcatatgaaaacttgaatgtctacttttgaaaccgtctacataacctcctcaaataactgtttttaattgacaaccatgtcttgcatcaaatgttgaacttggaaattttctgttctaatcaaccttcatgtaactgtggtcattaattgctacttctccgttccaaaatataacttcctagagttaattttgtcccaaatatagatgctacctagtacttgtaaagggtgagtttttccactaaaataccccttctacccattctacccctttgctttattatagcctcaacctaacctatagctgacccatcccaagaaggcaaccaagtctttttacccctctccttcatacccgtgctgaaggctatattttgggatggtgggagtaccttactacaaccccttccacattataagacattttcggtttgcttaagtcaaactttttcaagtttgaccaagtgtatagaaaaaaaaaacatagcaacatctacaacaccaaattatagtttcattaaatccaccattcaatatatttgcatagtatatttgacttgtgttgaaaatcttgctacacttctttacaaactcgatcaaatttaggacaaacccgaaacgtcttatagtatggaacagagggagtactgtatgtttgtgagcatcattttgaaacattgacttgtttcattcctggtgattattctatgtgtattttagatgatctagcaatctagtgtatgccttatagtacttatgatttctgatattccatatgtgtatgcctttttgggttttcaggatgatctctcattcaagcttgagtatgttcatccttatctggatggtgtggatgaccgtaataaaaaccgcaccttcaaaactagctgcttcaataccaggaaattgagtcctgtctttgttgctggccccaatatggatgaagctccacctgtttgggttgacagagttggattcaaagccaacataacagaggtttgcacagatttatatgatcttttgcatcttttattatgcattagctgccttctccaataatcatctataataacatgaggaaactgctcttggtttcagagcttcacacgtcagagcaaattcacatatggccttgtggtagaggagattacaacgcgtgatgaaaccaacagcatctgcactcatggttctcgagcaatgcctagtggtggcctgagtatggatggacctcccacaaccctcagtggtactggcatagatcggatggcttttctgcaagcaaatataactagagacaatacagaatttgtaaatggtgcagttattggcgacagatgtattttccaggtatgctctgtgcccttgtgattccaggaatacatactaaaccttcagttattggcaagtagttaggaataatattcagtcatacacttagttgtgtggaattttggaaaagatcaactaccgaggcagacctttggtactattgatatgtcagtttgatactttcatacattgcataaaatgagggttcaatgttcggaaaatattcagacacagtttagtgacaacttgtgatattaacccttttggtcatagaattcaactatttctgccaatatttcaattgctttgtaaatcgtttctgtatgtttgtgcaaattagtgtttaatgtaaatcctttgatatgTtttttttttttggctggctgcagttggatcaaggtcttggcattggaagcaaaaacccattcttcaaccgtcaccaacttactttgacaaagtttgttaatttaaacaagcaggagaaaggtgctggcaagccacttccagctgttttggttcttcatggtcattatgcaggttgtgtaggagatctgccaagctatgatgcatttacacttggaggaccttactcagttaggggctatggtatgggtgaactgggtgcttccaggaatgttcttgaggtgagtgttattagggaatttgcaatatattatgatacccctactttccttcttagttagaagagtaaacttcataaaactatagatactttgacaaaaccatcacaaaactacagatttaacacagaatttctcatagaattatagatttaacacaatttcttatagaactacagatttaagatggagtgtcaaaaaataaatattaagtagcaaatatttcacaaaactacaggtttagtgtcaatttaatcacaaaactacaacgtttacagctctaagataacggtagtgctagggattcaaactctagaatctatagttttgtgataacttcaatattaaatctgtagttttgtgataaatttgttgctaaatttgtagttttgtgatacaatgtcttaaatttactctattttagaattataaaacaaagaactactagatataattgatgccagtaccatggctacttgcaacatatagtgatccttgctttgttggtgacttatgtatcttttaatcctgcaggttgcgagtgagttgcgtattcctgtgaggaacacatatgtgtatggatttgttgaacatggcactgaccttggcagttccaaggatgtgaaagggaaccccacagagttcttccgacgggttggtcatgggtcatcatatggtcttggcgtcaagcttggcttggtaaggggagagtacatcgtagatcacaatgctggtactggaacagttttcttcagatttggcgagagattttgaaaacagttcagtcaaccaccagtggataatagatcattgaggtgggctgtttagctcatttgcaggcatagaatcctgaagcacctatgcatgttgtgtgaaccgttgatgtttctggattcaacttgaataggaacttctgttcccgctgaaataatgaagcaatgttgcttccatccaaagtgagaagttagctttcaggattagtattgtgtaggaagcaagatttgatcgcagtctggtgcttctttgacagaagtacttgctcctgtcattttcagtgctagagtttttttgttttgttcttttgctttggttagataaagtgttctagcagttttgtcccatattcgggctataaattttagttgaactatggtaagttggtaactactcctatctgttgctgcattttgtcggctcagagcttcacctgtttatctgaatcttttggcaccgctgaattcaaaccttggacctatcatactggtgtcaagcgtttcttcttgtcgttccaagttttcagtcccttcccgagctgctaaagcctcatcagcttggtgttcttttttcctgtagatgaagatgaagtgttttacgcaaaacgatgtggtattaatatatggttgattaagttttaattattacgaacttgaaaaatagattaatatgatattttagagtaactttcgtatagaaagttttcgtacaaaacacactgtttagcagtttgaaaaaaacgtgccacgaaaatcttgatcttcatccaaatcttgttgtagaaatgaacgggaccagctactatagtgaaatttagatttcaaagttcatgtatatttttgattgattagctgaaatttggaaagatattcccctgtggttctactctcccatcccgtccggttctagctcagactgaagcgttttccttcatttgaagtgaaatgcaacacagccacagcgttacaccggttcggatcagcggcaaatgtgcccggcgaaaaccagctcatggatgaggcagctcacaagctcttcacggcaaggccaccacggcgacgtcctccgcctcttcttcaccggggtcagactccaagctggcagccgtggcacggtggacccctggccgggggccgtgcccacggccctccgcgcctgcgcgcacctcgccgacgtcgcctccggccgcctcatccacgcgctcgtgctcacccgccccgccctcgcctcggacgccgtcgccgccaccgcgctccttgacatgtactccaagtgcggcctcgtcgccagcgcccgcaaggtgttcgacgaaatggcgtcgcgcggggacccggtcgtctggaacgcgctgctcgcgtgctacgcgcgccacggcctcccggagcacgcgctggcgctggccgtcaagatgcggggcatcggcctgtgtcccgacctggtcacctggaacatcgtcgtctcaggcttcgcgctggcgggcgatgacctgatggccggcgatttagtcggcgccatgaaagacgacgggttccagccggacgtggtcacatggacatcgcgcgtctccggctctgtactgaactttcagtacggcagagcacgcgcactgttccgagcaatgatggttgccggcggccgtgtcctgccaagctcggcaacgatcagtaccatcctgcccgcgttcgccaatgtcgctgacgtgaagcatggcaaggaagtccacggctactctgtcgtggccggcgtcgagcaagagctcaccgtcagcagcgccctcgtcgacatgtacgccaagtgcggtctcgtgctcgaagcgcgccggctattcgacaagatgccacagaggagcacggtgacatggaactccatgatcttcgggctggcgaactccggccactgccaagaagccgtcggcctcttcgaccggatgctgcgcgacggcgcaaagcccgaccacctgacgttcaccgccgtcctgacagcttgcagctacggcggcatggtcgaggtcgggaagatcctgtaccgagccatgcaggtggagtacggcgtcgagccgaggctggagcactacgcctgcatggtccacttgcttggccgcgccgggaggctcgacgaggcgtacggtttcatcagggcgatgcccctggagcccgaccgcttcgtctggggcgcgctgctgggagcgtgccgaagccatggaaacatcgagctcgcggagcttgcggcgtcgcgcctgcttgcagtcgagccagacaatgcggcgagctgcctcctgctctcgagtgcgctggcgaacgctggcaagcaggatgatgtcttcaagatcaagaggttggtgaagagacggcgtctgaagaagcttgatagctatagttgggtggagacttctttgtaatggggatgatcagccagagacgagcagaaacaagaaggtttgtaggttgggggtaacgcagaaatgcagaatagtcggaggaaatgatctattcacccccaggttaattgattcaacatctttttaacatgtgatgcagagataatttcagcctgtattctccttccacatacaacataacatgtacagggtgacttctattttgggcgctacatttacatttcatactatca
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| CDS seq | atggcgctcacctcccagagcctcttcttctccccgctggccgccggcccatcccggagagtccgggggcggggccgctccacctccgtgtcagccgccgcctccgcctcgtcgcacaactcgcagccccacggccacccccaacaacccctcgccgtcgcgtcgtccagctccaaatccgaatctaagggctcgaaaaccttcgccctcgcctccgccatcactgccgccgcctctggtgcattccttctcgcgtcatctggtggcgggttcgggggcggcgccgggggtcctctcggcggtggaggcggtggatggggcaccggaggaggaggaggtggtggtggtggtggcggcggcggcgggttctggtcgcggatcttctccggcggcgcggcgcacgcggatgagaagtcgtcgggggattgggacccgcacgggctcccggcaaacatcaacgtgccgatgacgaagctgagcgggctgaagaggtacaagatctccgagctcaagttcttcgaccgcgccgcgggagggggaggcgcgttcacggggcccgaggattccttcttcgagatggtgacgctgcagcccggcggcgtgtacaccaagtcgcagcttctgaaggagctcgagacgctcgtgtcctgtggcatgttcgagagggtcgacctcgaggggaaggccaagcccgatggcacccttggcctcaccgtgtcttttgtcgagagcgtgtggagcgctgctaagcagttcaagtgcatcaatgtggggctaatgtcgcagtcgggccaggttgacttcgaccaggacatgacagagagggagaagatggattacctccggaagcaggagcgtgattaccagcagcgtgttcgtggtgccaagccgtgcatattgccagataacgtgcgtggggaggtgctaggaatgatgaagaagcaggagaaggtgagcgctaggctcctgcagaggatcagggaccatgtccagaaatggtaccacaatgaggggttcgtctgcgcccaggtggtgaactttggaaacctaaacaccagtgaggttgtttgcgaggtggtcgagggggatataaccaaagtggagtaccagttccaggataagcttggaaattttgttgaggggaatacccaaattcctatcatagacagggagctcccacagcagcttcgacctggccatatctttaacattggagcagggaagcaagctctgaagaatataaattcacttgctttattctccaatatagaggtgaatccacgccctgatgaaacaaaagaagggggcattgtggttgaaatcaagcttaaagaattagaaccgaagtcagctgaagtaagtacagagtggagcatcgtacctggacgtgaaggccgaccaactctggcatccattcaacctggaggaactgtgtcatttgagcaccggaacatctatggtctaaacagatccattgttggttctgttacatccagcaacctgctcaaccctcaggatgatctctcattcaagcttgagtatgttcatccttatctggatggtgtggatgaccgtaataaaaaccgcaccttcaaaactagctgcttcaataccaggaaattgagtcctgtctttgttgctggccccaatatggatgaagctccacctgtttgggttgacagagttggattcaaagccaacataacagagagcttcacacgtcagagcaaattcacatatggccttgtggtagaggagattacaacgcgtgatgaaaccaacagcatctgcactcatggttctcgagcaatgcctagtggtggcctgagtatggatggacctcccacaaccctcagtggtactggcatagatcggatggcttttctgcaagcaaatataactagagacaatacagaatttgtaaatggtgcagttattggcgacagatgtattttccagttggatcaaggtcttggcattggaagcaaaaacccattcttcaaccgtcaccaacttactttgacaaagtttgttaatttaaacaagcaggagaaaggtgctggcaagccacttccagctgttttggttcttcatggtcattatgcaggttgtgtaggagatctgccaagctatgatgcatttacacttggaggaccttactcagttaggggctatggtatgggtgaactgggtgcttccaggaatgttcttgaggttgcgagtgagttgcgtattcctgtgaggaacacatatgtgtatggatttgttgaacatggcactgaccttggcagttccaaggatgtgaaagggaaccccacagagttcttccgacgggttggtcatgggtcatcatatggtcttggcgtcaagcttggcttgccacagcgttacaccggttcggatcagcggcaaatgtgcccggcgaaaaccagctcatggatgaggcagctcacaagctcttcacggcaaggccaccacggcgacgtcctccgcctcttcttcaccggggtcagactccaagctggcagccgtggcacggtggacccctggccgggggccgtgcccacggccctccgcgcctgcgcgcacctcgccgacgtcgcctccggccgcctcatccacgcgctcgtgctcacccgccccgccctcgcctcggacgccgtcgccgccaccgcgctccttgacatgtactccaagtgcggcctcgtcgccagcgcccgcaaggtgttcgacgaaatggcgtcgcgcggggacccggtcgtctggaacgcgctgctcgcgtgctacgcgcgccacggcctcccggagcacgcgctggcgctggccgtcaagatgcggggcatcggcctgtgtcccgacctggtcacctggaacatcgtcgtctcaggcttcgcgctggcgggcgatgacctgatggccggcgatttagtcggcgccatgaaagacgacgggttccagccggacgtggtcacatggacatcgcgcgtctccggctctgtactgaactttcagtacggcagagcacgcgcactgttccgagcaatgatggttgccggcggccgtgtcctgccaagctcggcaacgatcagtaccatcctgcccgcgttcgccaatgtcgctgacgtgaagcatggcaaggaagtccacggctactctgtcgtggccggcgtcgagcaagagctcaccgtcagcagcgccctcgtcgacatgtacgccaagtgcggtctcgtgctcgaagcgcgccggctattcgacaagatgccacagaggagcacggtgacatggaactccatgatcttcgggctggcgaactccggccactgccaagaagccgtcggcctcttcgaccggatgctgcgcgacggcgcaaagcccgaccacctgacgttcaccgccgtcctgacagcttgcagctacggcggcatggtcgaggtcgggaagatcctgtaccgagccatgcaggtggagtacggcgtcgagccgaggctggagcactacgcctgcatggtccacttgcttggccgcgccgggaggctcgacgaggcgtacggtttcatcagggcgatgcccctggagcccgaccgcttcgtctggggcgcgctgctgggagcgtgccgaagccatggaaacatcgagctcgcggagcttgcggcgtcgcgcctgcttgcagtcgagccagacaatgcggcgagctgcctcctgctctcgagtgcgctggcgaacgctggcaagcaggatgatgtcttcaagatcaagaggttggtgaagagacggcgtctgaagaagcttgatagctatagttgggtggagacttctttgtaa
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| Protein seq | MALTSQSLFFSPLAAGPSRRVRGRGRSTSVSAAASASSHNSQPHGHPQQPLAVASSSSKSESKGSKTFALASAITAAASGAFLLASSGGGFGGGAGGPLGGGGGGWGTGGGGGGGGGGGGGGFWSRIFSGGAAHADEKSSGDWDPHGLPANINVPMTKLSGLKRYKISELKFFDRAAGGGGAFTGPEDSFFEMVTLQPGGVYTKSQLLKELETLVSCGMFERVDLEGKAKPDGTLGLTVSFVESVWSAAKQFKCINVGLMSQSGQVDFDQDMTEREKMDYLRKQERDYQQRVRGAKPCILPDNVRGEVLGMMKKQEKVSARLLQRIRDHVQKWYHNEGFVCAQVVNFGNLNTSEVVCEVVEGDITKVEYQFQDKLGNFVEGNTQIPIIDRELPQQLRPGHIFNIGAGKQALKNINSLALFSNIEVNPRPDETKEGGIVVEIKLKELEPKSAEVSTEWSIVPGREGRPTLASIQPGGTVSFEHRNIYGLNRSIVGSVTSSNLLNPQDDLSFKLEYVHPYLDGVDDRNKNRTFKTSCFNTRKLSPVFVAGPNMDEAPPVWVDRVGFKANITESFTRQSKFTYGLVVEEITTRDETNSICTHGSRAMPSGGLSMDGPPTTLSGTGIDRMAFLQANITRDNTEFVNGAVIGDRCIFQLDQGLGIGSKNPFFNRHQLTLTKFVNLNKQEKGAGKPLPAVLVLHGHYAGCVGDLPSYDAFTLGGPYSVRGYGMGELGASRNVLEVASELRIPVRNTYVYGFVEHGTDLGSSKDVKGNPTEFFRRVGHGSSYGLGVKLGLPQRYTGSDQRQMCPAKTSSWMRQLTSSSRQGHHGDVLRLFFTGVRLQAGSRGTVDPWPGAVPTALRACAHLADVASGRLIHALVLTRPALASDAVAATALLDMYSKCGLVASARKVFDEMASRGDPVVWNALLACYARHGLPEHALALAVKMRGIGLCPDLVTWNIVVSGFALAGDDLMAGDLVGAMKDDGFQPDVVTWTSRVSGSVLNFQYGRARALFRAMMVAGGRVLPSSATISTILPAFANVADVKHGKEVHGYSVVAGVEQELTVSSALVDMYAKCGLVLEARRLFDKMPQRSTVTWNSMIFGLANSGHCQEAVGLFDRMLRDGAKPDHLTFTAVLTACSYGGMVEVGKILYRAMQVEYGVEPRLEHYACMVHLLGRAGRLDEAYGFIRAMPLEPDRFVWGALLGACRSHGNIELAELAASRLLAVEPDNAASCLLLSSALANAGKQDDVFKIKRLVKRRRLKKLDSYSWVETSL |
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| Function | Protein TOC75, chloroplastic [UniProtKB/Swiss-Prot:Q84Q83] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_03g0012330 | OsKeNa_03g0012330.01 | Chr03 | 9295150 | 9302600 | + | NAM | ||
| CDS seq | atggcgctcacctcccagagcctcttcttctccccgctggccgccggcccatcccggagagtccgggggcggggccgctccacctccgtgtcagccgccgcctccgcctcgtcgcacaactcgcagccccacggccacccccaacaacccctcgccgtcgcgtcgtccagctccaaatccgaatctaagggctcgaaaaccttcgccctcgcctccgccatcactgccgccgcctctggtgcattccttctcgcgtcatctggtggcgggttcgggggcggcgccgggggtcctctcggcggtggaggcggtggatggggcaccggaggaggaggaggtggtggtggtggtggcggcggcggcgggttctggtcgcggatcttctccggcggcgcggcgcacgcggatgagaagtcgtcgggggattgggacccgcacgggctcccggcaaacatcaacgtgccgatgacgaagctgagcgggctgaagaggtacaagatctccgagctcaagttcttcgaccgcgccgcgggagggggaggcgcgttcacggggcccgaggattccttcttcgagatggtgacgctgcagcccggcggcgtgtacaccaagtcgcagcttctgaaggagctcgagacgctcgtgtcctgtggcatgttcgagagggtcgacctcgaggggaaggccaagcccgatggcacccttggcctcaccgtgtcttttgtcgagagcgtgtggagcgctgctaagcagttcaagtgcatcaatgtggggctaatgtcgcagtcgggccaggttgacttcgaccaggacatgacagagagggagaagatggattacctccggaagcaggagcgtgattaccagcagcgtgttcgtggtgccaagccgtgcatattgccagataacgtgcgtggggaggtgctaggaatgatgaagaagcaggagaaggtgagcgctaggctcctgcagaggatcagggaccatgtccagaaatggtaccacaatgaggggttcgtctgcgcccaggtggtgaactttggaaacctaaacaccagtgaggttgtttgcgaggtggtcgagggggatataaccaaagtggagtaccagttccaggataagcttggaaattttgttgaggggaatacccaaattcctatcatagacagggagctcccacagcagcttcgacctggccatatctttaacattggagcagggaagcaagctctgaagaatataaattcacttgctttattctccaatatagaggtgaatccacgccctgatgaaacaaaagaagggggcattgtggttgaaatcaagcttaaagaattagaaccgaagtcagctgaagtaagtacagagtggagcatcgtacctggacgtgaaggccgaccaactctggcatccattcaacctggaggaactgtgtcatttgagcaccggaacatctatggtctaaacagatccattgttggttctgttacatccagcaacctgctcaaccctcaggatgatctctcattcaagcttgagtatgttcatccttatctggatggtgtggatgaccgtaataaaaaccgcaccttcaaaactagctgcttcaataccaggaaattgagtcctgtctttgttgctggccccaatatggatgaagctccacctgtttgggttgacagagttggattcaaagccaacataacagagagcttcacacgtcagagcaaattcacatatggccttgtggtagaggagattacaacgcgtgatgaaaccaacagcatctgcactcatggttctcgagcaatgcctagtggtggcctgagtatggatggacctcccacaaccctcagtggtactggcatagatcggatggcttttctgcaagcaaatataactagagacaatacagaatttgtaaatggtgcagttattggcgacagatgtattttccagttggatcaaggtcttggcattggaagcaaaaacccattcttcaaccgtcaccaacttactttgacaaagtttgttaatttaaacaagcaggagaaaggtgctggcaagccacttccagctgttttggttcttcatggtcattatgcaggttgtgtaggagatctgccaagctatgatgcatttacacttggaggaccttactcagttaggggctatggtatgggtgaactgggtgcttccaggaatgttcttgaggttgcgagtgagttgcgtattcctgtgaggaacacatatgtgtatggatttgttgaacatggcactgaccttggcagttccaaggatgtgaaagggaaccccacagagttcttccgacgggttggtcatgggtcatcatatggtcttggcgtcaagcttggcttgccacagcgttacaccggttcggatcagcggcaaatgtgcccggcgaaaaccagctcatggatgaggcagctcacaagctcttcacggcaaggccaccacggcgacgtcctccgcctcttcttcaccggggtcagactccaagctggcagccgtggcacggtggacccctggccgggggccgtgcccacggccctccgcgcctgcgcgcacctcgccgacgtcgcctccggccgcctcatccacgcgctcgtgctcacccgccccgccctcgcctcggacgccgtcgccgccaccgcgctccttgacatgtactccaagtgcggcctcgtcgccagcgcccgcaaggtgttcgacgaaatggcgtcgcgcggggacccggtcgtctggaacgcgctgctcgcgtgctacgcgcgccacggcctcccggagcacgcgctggcgctggccgtcaagatgcggggcatcggcctgtgtcccgacctggtcacctggaacatcgtcgtctcaggcttcgcgctggcgggcgatgacctgatggccggcgatttagtcggcgccatgaaagacgacgggttccagccggacgtggtcacatggacatcgcgcgtctccggctctgtactgaactttcagtacggcagagcacgcgcactgttccgagcaatgatggttgccggcggccgtgtcctgccaagctcggcaacgatcagtaccatcctgcccgcgttcgccaatgtcgctgacgtgaagcatggcaaggaagtccacggctactctgtcgtggccggcgtcgagcaagagctcaccgtcagcagcgccctcgtcgacatgtacgccaagtgcggtctcgtgctcgaagcgcgccggctattcgacaagatgccacagaggagcacggtgacatggaactccatgatcttcgggctggcgaactccggccactgccaagaagccgtcggcctcttcgaccggatgctgcgcgacggcgcaaagcccgaccacctgacgttcaccgccgtcctgacagcttgcagctacggcggcatggtcgaggtcgggaagatcctgtaccgagccatgcaggtggagtacggcgtcgagccgaggctggagcactacgcctgcatggtccacttgcttggccgcgccgggaggctcgacgaggcgtacggtttcatcagggcgatgcccctggagcccgaccgcttcgtctggggcgcgctgctgggagcgtgccgaagccatggaaacatcgagctcgcggagcttgcggcgtcgcgcctgcttgcagtcgagccagacaatgcggcgagctgcctcctgctctcgagtgcgctggcgaacgctggcaagcaggatgatgtcttcaagatcaagaggttggtgaagagacggcgtctgaagaagcttgatagctatagttgggtggagacttctttgtaa
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| Protein seq | MALTSQSLFFSPLAAGPSRRVRGRGRSTSVSAAASASSHNSQPHGHPQQPLAVASSSSKSESKGSKTFALASAITAAASGAFLLASSGGGFGGGAGGPLGGGGGGWGTGGGGGGGGGGGGGGFWSRIFSGGAAHADEKSSGDWDPHGLPANINVPMTKLSGLKRYKISELKFFDRAAGGGGAFTGPEDSFFEMVTLQPGGVYTKSQLLKELETLVSCGMFERVDLEGKAKPDGTLGLTVSFVESVWSAAKQFKCINVGLMSQSGQVDFDQDMTEREKMDYLRKQERDYQQRVRGAKPCILPDNVRGEVLGMMKKQEKVSARLLQRIRDHVQKWYHNEGFVCAQVVNFGNLNTSEVVCEVVEGDITKVEYQFQDKLGNFVEGNTQIPIIDRELPQQLRPGHIFNIGAGKQALKNINSLALFSNIEVNPRPDETKEGGIVVEIKLKELEPKSAEVSTEWSIVPGREGRPTLASIQPGGTVSFEHRNIYGLNRSIVGSVTSSNLLNPQDDLSFKLEYVHPYLDGVDDRNKNRTFKTSCFNTRKLSPVFVAGPNMDEAPPVWVDRVGFKANITESFTRQSKFTYGLVVEEITTRDETNSICTHGSRAMPSGGLSMDGPPTTLSGTGIDRMAFLQANITRDNTEFVNGAVIGDRCIFQLDQGLGIGSKNPFFNRHQLTLTKFVNLNKQEKGAGKPLPAVLVLHGHYAGCVGDLPSYDAFTLGGPYSVRGYGMGELGASRNVLEVASELRIPVRNTYVYGFVEHGTDLGSSKDVKGNPTEFFRRVGHGSSYGLGVKLGLPQRYTGSDQRQMCPAKTSSWMRQLTSSSRQGHHGDVLRLFFTGVRLQAGSRGTVDPWPGAVPTALRACAHLADVASGRLIHALVLTRPALASDAVAATALLDMYSKCGLVASARKVFDEMASRGDPVVWNALLACYARHGLPEHALALAVKMRGIGLCPDLVTWNIVVSGFALAGDDLMAGDLVGAMKDDGFQPDVVTWTSRVSGSVLNFQYGRARALFRAMMVAGGRVLPSSATISTILPAFANVADVKHGKEVHGYSVVAGVEQELTVSSALVDMYAKCGLVLEARRLFDKMPQRSTVTWNSMIFGLANSGHCQEAVGLFDRMLRDGAKPDHLTFTAVLTACSYGGMVEVGKILYRAMQVEYGVEPRLEHYACMVHLLGRAGRLDEAYGFIRAMPLEPDRFVWGALLGACRSHGNIELAELAASRLLAVEPDNAASCLLLSSALANAGKQDDVFKIKRLVKRRRLKKLDSYSWVETSL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_03g0012330 | OsKeNa_03g0012330.02 | Chr03 | 9301117 | 9302833 | + | IsoSeq | ||
| CDS seq | atggaactccatgatcttcgggctggcgaactccggccactgccaagaagccgtcggcctcttcgaccggatgctgcgcgacggcgcaaagcccgaccacctgacgttcaccgccgtcctgacagcttgcagctacggcggcatggtcgaggtcgggaagatcctgtaccgagccatgcaggtggagtacggcgtcgagccgaggctggagcactacgcctgcatggtccacttgcttggccgcgccgggaggctcgacgaggcgtacggtttcatcagggcgatgcccctggagcccgaccgcttcgtctggggcgcgctgctgggagcgtgccgaagccatggaaacatcgagctcgcggagcttgcggcgtcgcgcctgcttgcagtcgagccagacaatgcggcgagctgcctcctgctctcgagtgcgctggcgaacgctggcaagca
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| Protein seq | MELHDLRAGELRPLPRSRRPLRPDAARRRKARPPDVHRRPDSLQLRRHGRGREDPVPSHAGGVRRRAEAGALRLHGPLAWPRREARRGVRFHQGDAPGARPLRLGRAAGSVPKPWKHRARGACGVAPACSRARQCGELPPALECAGERWQA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.281645 | 2.757954 | 3.555701 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0271300 | RBH | 0.482617 | 0.122807 | 0.319099 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g16450 | RBH | 0.000000 | 0.376403 | 0.451208 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0271300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0012510 | RBH | 0.716107 | 10.897959 | 5.688347 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0039740 | RBH | 0.000000 | 0.733064 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0012340 | RBH | 1.212252 | 1.238732 | 10.024911 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0012300 | RBH | 0.270337 | 0.312813 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0012170 | RBH | 6.450120 | 11.833624 | 13.345260 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0154900 | RBH | 0.467144 | 0.7085105 | 0.353031 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0012070 | RBH | 0.593839 | 0.373508 | 1.280939 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0155600 | RBH | 13.779777 | 11.052262 | 29.1365415 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0012200 | RBH | 0.380949 | 0.272558 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0012260 | RBH | 0.414197 | 8.402977 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0012280 | RBH | 7.637943 | 14.529501 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0012200 | RBH | 0.999384 | 0.796365 | 1.367298 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0012140 | RBH | 0.486842 | 9.654485 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G012110 | RBH | 0.786950 | 3.795877 | 3.547680 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0011970 | RBH | 3.129857 | 6.968142 | 9.688274 |
