Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_03g0002140 | OGI:03004270 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr03:1543695-1546358 | ||||||||
| Gene Symbol | NAC56, ONAC056, ONAC56, OsSWN5 | ||||||||||
| DNA seq | gtcattaattactgtagagagtacagtgtactatatatgccacccagctgggagtcaaagacatttacaaagtgccaatgtaggatcacatcaactgggaaaaaaaaagcacattgcaatgccatgcatcttatgactctgcacaggggacagatcgattaaaggttacaatcacatttgggaacataaaaagaagcagaagaaaaaaaaagagaacaatttataaaaatttcagctataaccatatatcccatccggttgatgtgatgaacacatcgtgctgtgaatgctttgtccctcatttgtcaaacacacagattccgaggtcgccgtcgacgccgctcgcgccggcgccggagccgagcaaccccgtccacctgtcgacctcgtctctctcgtcgctgttgagaaacagcaatgctgccatgtcgtcatcgccgtggtccagcggcgagctcacaccggcgactgccgccgccgcggcttccgccgttgcctccatgctgccacactccccggggctaagctgcgacgcgacgaacttgtcgagcgctctccagtccgtggtcgtcgccaccttgtcgccggcggcgcgggctttcttggccctcctaccgccattatcgcccttgcagtcgtcgtcctcgccggcggtggccagctggctcgggttgggctggagcggcgccgcagccgcggaggggctctcgagctgcggcagctcggcgaggtggctggagtagtggaggagggctgtggcggcgccgtccagctccgcctcctgcttgaaccgcccgctcctgtgctgccgcctcatctgcgcgtacgccgcgctcggatcggcgaacgccgccgccgccgcggcgctcatgatgttgcgctcgtgcaaggagtagtcccacgtctccaccatgctcctcgccggatacgccgtcctcttcttgaatgctcggcacaccacccatccttcttcctgtagtacacacatgcaaataaagttagatacttaggtggtgtttgagtctcccgaagattaagattaaatatttcatgtaaaacgttgtggtaataacgtataattaattaagttttaattattataaacttgaaaaatagattaatccgatattttagaacaactttcatatagaaagttttcacaagaaacacaccgtttagcagtttgaaaagcgtagcacaaaaattcaaaatttaatccattgttttaagaggaaacgaacgggggggatgtgagctgcattttgcaaggttgacattgacatcaaagtatttgccaatcattcgtaaagttagctagcttcccactgtgtgatagtggaacaatacgagctgataacttttttagttttgtggtgacatgtttgccaagcagcatgcaatggttttgatgagtactagcacaagttgcatacagcttgtaaacaatatatggcgcatgttaggacgttcacaccaggggaaaccctaactaggccatgcatgcgcatgcaattgtctagggaaaaaaggttttggtgttagtggtaaggtcaggatggcatcaacactggatgcaggctacctttatttgggagagaatagaagactttggaaggctcacaaaaagggaggccaatgcaagacttatctttcaagaacaaaaagagttgtggtgctgcttagtgctactgatatattcctatctatatggtccattactagtggtacatgaattagacatgcttgcacgcatgtatatcggcggcagatctctgtgcgtgctactttagaaatctctgggcaccattagaccttaacctctaataaggcctaagctggtatactgcattttatcttcagttgcaagttgcaacacacatatataagtatataattcagatatattttctcagatatataagtatgcaatgtggtcactaacaaccttaaaaaatattttctttttttttgataaacccagcctatacatccaaccggatatatacaactttttaaaattaggaacttagcctatcaagcatggaaccagtttgctagtttatgtagagctagctagcatgcagagaaaattaagaaaccaattagctagtgaaatcggtatatgtatatacctgtggcggcgcgttctcgtcggtctcgaggcggtactcgtgcatgatccagtcggtcttctggccattaggcgccctgcccttatagaagacgagtgtcttcctcatgccgatgagcctgctcttgtcgtgcaccgccttgtccctccccgtcgccttccagaaccccgccattgtcgccctgttcgtcctcgtccccgtcgggtacttcctgtccttgtagctgaagaagtaccactcgctttgctcatcgtacccgatcccacaatgttcttcatcaatcaacaaaccaggcaacacaattaggataaataatgccacaatgatcatctctgaaactcaaattaatcatacgatctctagttgtaccttggagatcccagggttcgatgcggtagagatcgatgtcgcggatgacgtcgaggtcgatcttctgggaggcgaccttcttgcggaggtagtagccgacgagctcctcgtcggtggggtggaacctgaacccaggagggacgcatgattccatggcgtccat
More
|
||||||||||
| CDS seq | atggacgccatggaatcatgcgtccctcctgggttcaggttccaccccaccgacgaggagctcgtcggctactacctccgcaagaaggtcgcctcccagaagatcgacctcgacgtcatccgcgacatcgatctctaccgcatcgaaccctgggatctccaagaacattgtgggatcgggtacgatgagcaaagcgagtggtacttcttcagctacaaggacaggaagtacccgacggggacgaggacgaacagggcgacaatggcggggttctggaaggcgacggggagggacaaggcggtgcacgacaagagcaggctcatcggcatgaggaagacactcgtcttctataagggcagggcgcctaatggccagaagaccgactggatcatgcacgagtaccgcctcgagaccgacgagaacgcgccgccacagaagaggacggcgtatccggcgaggagcatggtggagacgtgggactactccttgcacgagcgcaacatcatgagcgccgcggcggcggcggcgttcgccgatccgagcgcggcgtacgcgcagatgaggcggcagcacaggagcgggcggttcaagcaggaggcggagctggacggcgccgccacagccctcctccactactccagccacctcgccgagctgccgcagctcgagagcccctccgcggctgcggcgccgctccagcccaacccgagccagctggccaccgccggcgaggacgacgactgcaagggcgataatggcggtaggagggccaagaaagcccgcgccgccggcgacaaggtggcgacgaccacggactggagagcgctcgacaagttcgtcgcgtcgcagcttagccccggggagtgtggcagcatggaggcaacggcggaagccgcggcggcggcagtcgccggtgtgagctcgccgctggaccacggcgatgacgacatggcagcattgctgtttctcaacagcgacgagagagacgaggtcgacaggtggacggggttgctcggctccggcgccggcgcgagcggcgtcgacggcgacctcggaatctgtgtgtttgacaaatga
More
|
||||||||||
| Protein seq | MDAMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQEHCGIGYDEQSEWYFFSYKDRKYPTGTRTNRATMAGFWKATGRDKAVHDKSRLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLETDENAPPQKRTAYPARSMVETWDYSLHERNIMSAAAAAAFADPSAAYAQMRRQHRSGRFKQEAELDGAATALLHYSSHLAELPQLESPSAAAAPLQPNPSQLATAGEDDDCKGDNGGRRAKKARAAGDKVATTTDWRALDKFVASQLSPGECGSMEATAEAAAAAVAGVSSPLDHGDDDMAALLFLNSDERDEVDRWTGLLGSGAGASGVDGDLGICVFDK |
||||||||||
| Function | NAC domain-containing protein 37 [UniProtKB/Swiss-Prot:Q9SL41] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_03g0002140 | OsKeNa_03g0002140.01 | Chr03 | 1543695 | 1546358 | - | NAM | ||
| CDS seq | atggacgccatggaatcatgcgtccctcctgggttcaggttccaccccaccgacgaggagctcgtcggctactacctccgcaagaaggtcgcctcccagaagatcgacctcgacgtcatccgcgacatcgatctctaccgcatcgaaccctgggatctccaagaacattgtgggatcgggtacgatgagcaaagcgagtggtacttcttcagctacaaggacaggaagtacccgacggggacgaggacgaacagggcgacaatggcggggttctggaaggcgacggggagggacaaggcggtgcacgacaagagcaggctcatcggcatgaggaagacactcgtcttctataagggcagggcgcctaatggccagaagaccgactggatcatgcacgagtaccgcctcgagaccgacgagaacgcgccgccacagaagaggacggcgtatccggcgaggagcatggtggagacgtgggactactccttgcacgagcgcaacatcatgagcgccgcggcggcggcggcgttcgccgatccgagcgcggcgtacgcgcagatgaggcggcagcacaggagcgggcggttcaagcaggaggcggagctggacggcgccgccacagccctcctccactactccagccacctcgccgagctgccgcagctcgagagcccctccgcggctgcggcgccgctccagcccaacccgagccagctggccaccgccggcgaggacgacgactgcaagggcgataatggcggtaggagggccaagaaagcccgcgccgccggcgacaaggtggcgacgaccacggactggagagcgctcgacaagttcgtcgcgtcgcagcttagccccggggagtgtggcagcatggaggcaacggcggaagccgcggcggcggcagtcgccggtgtgagctcgccgctggaccacggcgatgacgacatggcagcattgctgtttctcaacagcgacgagagagacgaggtcgacaggtggacggggttgctcggctccggcgccggcgcgagcggcgtcgacggcgacctcggaatctgtgtgtttgacaaatga
More
|
|||||||
| Protein seq | MDAMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQEHCGIGYDEQSEWYFFSYKDRKYPTGTRTNRATMAGFWKATGRDKAVHDKSRLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLETDENAPPQKRTAYPARSMVETWDYSLHERNIMSAAAAAAFADPSAAYAQMRRQHRSGRFKQEAELDGAATALLHYSSHLAELPQLESPSAAAAPLQPNPSQLATAGEDDDCKGDNGGRRAKKARAAGDKVATTTDWRALDKFVASQLSPGECGSMEATAEAAAAAVAGVSSPLDHGDDDMAALLFLNSDERDEVDRWTGLLGSGAGASGVDGDLGICVFDK
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0624600 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g03540 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0624600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0002170 | RBH | 0.0 | 0.0 | 0.179920 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018420 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0002160 | RBH | 0.0 | 0.0 | 0.894161 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0002150 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0002190 | RBH | 0.0 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0024400 | RBH | 0.294146 | 3.32686 | 0.25322 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0002130 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0025400 | RBH | 0.357902 | 1.566696 | 0.294022 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0002220 | RBH | 0.038542 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0002220 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0002190 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0002230 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0002210 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G002210 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0002040 | RBH | 0.0 | 0.000000 | 0.0 |
