Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_02g0033270 | OGI:02088030 | 14/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr02:31336098-31340695 | ||||||||
| Gene Symbol | OsDjC21 | ||||||||||
| DNA seq | atttcgtcggcctctctcgagtcctggactcctccctcgccacctccccaaattagcagaagccgcgcaccacgcgcacgcgcacgtccgcgccgaggaggagctggcctcgcgcgctcttcgaggagagaccgcgggggaaaccctagaggctgcgccgccgctcgccgccggccggccgcggcgggtggtggggcagggcctgacgacgaccggttcaacaagcagtaagatctgaggttttgggggtgggattagggttgttgccggggtttgtttggtgttgcggcggcgccgcggagggggttcatggcggggtcgaagtttgggtcgttcaagtcggagaaggggagctcggcgggggcggcggcgggggccggagcggcggcgcagaggagggacccatacgaggtgcttggggtggggcgtaatgccaccgagcaggagatcaagagcgccttccgccgcatggccctcaagtaagtaaagcttcttggatttggtcacttttgagtgctgttgttatgttcgggagggaaggattttgttcaaatttctgaagaacggagtgcactttttggtcaaattggctcactttgaataaattcatctcctgtaacaccagcacaagagctgttcactgagcttttagaaccgtgtattagattcaaacaccaaaccaaggcttctcctgtctcatttctggtaatggaaatgggggcctcgagcccttgctcaaaaagaaaaaaaaaagccttctcctaccttacgttcaaaaagttggtagtatgctggtactttgctttgcttgtgtggtaattgttgcagaacgactgagcgataatgaagtgagttttttttttctgctttttggtactgcaggtaccatccagacaagaatgcagacgaccctgttgcctcggacaagtttcaagaagccacattctcttacaacatactgtcagatcccgataagaggcggcagtatgattcctcgggattcgaggtaatttatggcatacaaaagcatgatgtttgatctgcttgattttgtctgcctgtaatgcttttgttatctttcaggccattgaagcagatagtcaggaactggagttggacctgtcaagtctgaacactgtaaatacagtgtttgctgccctgtttaggtaggttgttaaggatagccatttactttgatcttacttaatcgattatttaattatgcttatgtttgtgtagcaagctaggtgtaccaatcaagaccacagtttctgcaacagttttagaggaagcattgaatgggtcggtgggaatttcccaactcgagcttggccagtccgtctttaggaaggtattcaactatctcccataatttactttccatttttttcctgtcagtgaataatgtttcagatttcacatattggcaggtggaaaagcaatcagctcacttttattctgtggacataacagataaagaagccaaaatggggttagtgtgtagagttcaatcaactgctaaaagtaaattcaaggttagttgctaacttgttgttagtgtttgtccgttatgatctttcgacagtaactactccattatacaactttgtctgatgagcattgccgcctcctagttgtatgttgaaaagcttagctgactttagctgttactttctattttctcttctcaacaacaagaaatgtggttgtgatgtgagctgttgttcttgaaaaactttttacggccaaaggtggcaatgttaattgctataataatgaacttggtttagccgtctgtctgtttcttctgagattgccatgatatctaattatgatattcgaaagtaaaaacaatcaagtacttgatacatgtataattatactgtaagtttagaaagttttgccatgcacagattctaaggtaagtttctctttctttcagttgctatatttcgagcctgaagaaaatggtgggttaagccttgctttacaggtatgtatagtctgttcttatattttgctagtcctagaaacaaactaaaaatgggttacaaaaaatactcctatttgggactagcttattatctgcgtaagtttctagcatgaaaatccaaaacacactgagttggatattgttttgtcacggggtcatcctgtaaagtgtttatgcaatataatccacagcacattctggttaattgacaagtttgaactatttactctattttttgcacaagccagagatatacctcccttttttagaaccattcctaaccctatgttacaattggctggcacttctttttctgtgaattttcctgtaatcttgagtgcaccactactccactagtaacagttgacaaactattgttccatcacaactgtggagcaagacaaactcagaaagcctcttggtagatgtatttggtgactattctttctgtaaataaaatacttaagtgagccttcattctcataatatagatggaaaactttccatattggcataactagtaaacttcgaatattatgattttgtgtagtcaatgttgcaaggatggcctgtacgatacaaaatatttactgcctaatgatgcctttaggaatccagggtcctcgacattaaaaagcttttctctgtttagcttaacctggaaagatgcttcttgtttatatgtggttttatgcaccatagaagattagtttaaattagcagagcacttgaaaagacactagcatgacaaattcaggtaatgaaacgggattaatcctggttatgtctgcgtgctgtattcaaacatccgcaactgacatcttttgccgaaggccttccaagttatattattccctttgaaataaattctggtctgtgggattgactattaacatgttgctttgcaccaatactgctttttcatccaattttcattctatccagtacccaatgacaaggatttgatatttttattgtgctagtcttttgatgttttgggcatggtttcagctaatgtatcatgttagtgcaggaagacagtgtaaagacagggaaagttacttctgctggaatgttctttcttggctttccagtctatcgctttgaacaaaataattcagtgagtatgcaagctattgtctggctacctctctatgtttttgtttttggtgcctctttaccagctctagttactgccaggttgctgctgcaaaggatcctgatagtgcattctttaaaagattggatggctttcaaccatgtgaagtaaatgaactaaaagcagggacccatttttttgctgtctatggtacgccatttattttgttgcttgtattagtttgttatccctggcggtgtacaatggctttaaaaagatcagtcacctcatttaggtgataatttcttcaagagtgcaacctataatatagaggttgtatgtgctgaacccttttctactgaaaaggagaaactacgatgcgtggaggcaaagatacttgcaaaacgatctgagctgtctaaatttgagtctgagtatagagaggtataatccaaccttttaaattgtttgtgtccgcaaatccaagagatagttttgttaatagctgaaattttcaggtcttagcgaagttcaccgagatgaccagcagatacgctcaagaaatgcagacggtactgtttgtatttgtgaaatactcctagttcatttctgcttctgaccttgttctgatatcatgttttctttatagatcgacgagcttctcaaggaaaggaatgcaattcatgcatcctacaccaacaacacaactctgcaacggagttccagtagcaacaaagggaaaacatcctctaaagagtccaaaagtgatgatgaccaaactgtgaaaaaggaaaagaaatcgaagagcaagtccatggagggatccagaagtgatgatgatggtcctagaaaggaaaagaaacctaaggaacgacttcgaaggaagaaatggttcaacatccatttgaaagtagacaagagaagaccctgctgaggaaggtagtgtgttatttgataataacatattttgatttgaggtagcttctgcagtatttagttatcttcctctgtgatctttaggtattccctgcaagttactactcccaggaaatggaacccaagggagttgctccgagaagaaatatctttttctttgtcgtccactccatgggatcaaataggcaggaatctcagtttgacattcggaaagacaccctcgcaaattattttttctcctgtgacgtaacattttgtttcctgaaaagtcaggagcctcggcagtttcagaaatgatgtaaaatattacatgtagtgttcttttggggatcttactggcgctgtatccgttcacccggaaccaagatggttaatgatgtgtgtatacagcttcaagaaactgtcttatgttgtacactgcagccagaatccaattcagattcgttcaaatttttaggtgatggctacgttgatcttttactacctggcacttagggaaatgggcaagttatgatcttatatctacgcaatcgattaaacatcaataattgagccattttgcatgggcat
More
|
||||||||||
| CDS seq | atggcggggtcgaagtttgggtcgttcaagtcggagaaggggagctcggcgggggcggcggcgggggccggagcggcggcgcagaggagggacccatacgaggtgcttggggtggggcgtaatgccaccgagcaggagatcaagagcgccttccgccgcatggccctcaagtaccatccagacaagaatgcagacgaccctgttgcctcggacaagtttcaagaagccacattctcttacaacatactgtcagatcccgataagaggcggcagtatgattcctcgggattcgaggccattgaagcagatagtcaggaactggagttggacctgtcaagtctgaacactgtaaatacagtgtttgctgccctgtttagcaagctaggtgtaccaatcaagaccacagtttctgcaacagttttagaggaagcattgaatgggtcggtgggaatttcccaactcgagcttggccagtccgtctttaggaaggtggaaaagcaatcagctcacttttattctgtggacataacagataaagaagccaaaatggggttagtgtgtagagttcaatcaactgctaaaagtaaattcaagttgctatatttcgagcctgaagaaaatggtgggttaagccttgctttacaggaagacagtgtaaagacagggaaagttacttctgctggaatgttctttcttggctttccagtctatcgctttgaacaaaataattcagttgctgctgcaaaggatcctgatagtgcattctttaaaagattggatggctttcaaccatgtgaagtaaatgaactaaaagcagggacccatttttttgctgtctatggtgataatttcttcaagagtgcaacctataatatagaggttgtatgtgctgaacccttttctactgaaaaggagaaactacgatgcgtggaggcaaagatacttgcaaaacgatctgagctgtctaaatttgagtctgagtatagagaggtcttagcgaagttcaccgagatgaccagcagatacgctcaagaaatgcagacgatcgacgagcttctcaaggaaaggaatgcaattcatgcatcctacaccaacaacacaactctgcaacggagttccagtagcaacaaagggaaaacatcctctaaagagtccaaaagtgatgatgaccaaactgtgaaaaaggaaaagaaatcgaagagcaagtccatggagggatccagaagtgatgatgatggtcctagaaaggaaaagaaacctaaggaacgacttcgaaggaagaaatggttcaacatccatttgaaagtagacaagagaagaccctgctga
More
|
||||||||||
| Protein seq | MAGSKFGSFKSEKGSSAGAAAGAGAAAQRRDPYEVLGVGRNATEQEIKSAFRRMALKYHPDKNADDPVASDKFQEATFSYNILSDPDKRRQYDSSGFEAIEADSQELELDLSSLNTVNTVFAALFSKLGVPIKTTVSATVLEEALNGSVGISQLELGQSVFRKVEKQSAHFYSVDITDKEAKMGLVCRVQSTAKSKFKLLYFEPEENGGLSLALQEDSVKTGKVTSAGMFFLGFPVYRFEQNNSVAAAKDPDSAFFKRLDGFQPCEVNELKAGTHFFAVYGDNFFKSATYNIEVVCAEPFSTEKEKLRCVEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTLQRSSSSNKGKTSSKESKSDDDQTVKKEKKSKSKSMEGSRSDDDGPRKEKKPKERLRRKKWFNIHLKVDKRRPC |
||||||||||
| Function | Chaperone protein dnaJ 16 [UniProtKB/Swiss-Prot:Q8VXV4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0033270 | OsKeNa_02g0033270.02 | Chr02 | 31336098 | 31340695 | + | NAM | ||
| CDS seq | atggcggggtcgaagtttgggtcgttcaagtcggagaaggggagctcggcgggggcggcggcgggggccggagcggcggcgcagaggagggacccatacgaggtgcttggggtggggcgtaatgccaccgagcaggagatcaagagcgccttccgccgcatggccctcaagtaccatccagacaagaatgcagacgaccctgttgcctcggacaagtttcaagaagccacattctcttacaacatactgtcagatcccgataagaggcggcagtatgattcctcgggattcgaggccattgaagcagatagtcaggaactggagttggacctgtcaagtctgaacactgtaaatacagtgtttgctgccctgtttagcaagctaggtgtaccaatcaagaccacagtttctgcaacagttttagaggaagcattgaatgggtcggtgggaatttcccaactcgagcttggccagtccgtctttaggaaggtggaaaagcaatcagctcacttttattctgtggacataacagataaagaagccaaaatggggttagtgtgtagagttcaatcaactgctaaaagtaaattcaagttgctatatttcgagcctgaagaaaatggtgggttaagccttgctttacaggaagacagtgtaaagacagggaaagttacttctgctggaatgttctttcttggctttccagtctatcgctttgaacaaaataattcagttgctgctgcaaaggatcctgatagtgcattctttaaaagattggatggctttcaaccatgtgaagtaaatgaactaaaagcagggacccatttttttgctgtctatggtgataatttcttcaagagtgcaacctataatatagaggttgtatgtgctgaacccttttctactgaaaaggagaaactacgatgcgtggaggcaaagatacttgcaaaacgatctgagctgtctaaatttgagtctgagtatagagaggtcttagcgaagttcaccgagatgaccagcagatacgctcaagaaatgcagacgatcgacgagcttctcaaggaaaggaatgcaattcatgcatcctacaccaacaacacaactctgcaacggagttccagtagcaacaaagggaaaacatcctctaaagagtccaaaagtgatgatgaccaaactgtgaaaaaggaaaagaaatcgaagagcaagtccatggagggatccagaagtgatgatgatggtcctagaaaggaaaagaaacctaaggaacgacttcgaaggaagaaatggttcaacatccatttgaaagtagacaagagaagaccctgctga
More
|
|||||||
| Protein seq | MAGSKFGSFKSEKGSSAGAAAGAGAAAQRRDPYEVLGVGRNATEQEIKSAFRRMALKYHPDKNADDPVASDKFQEATFSYNILSDPDKRRQYDSSGFEAIEADSQELELDLSSLNTVNTVFAALFSKLGVPIKTTVSATVLEEALNGSVGISQLELGQSVFRKVEKQSAHFYSVDITDKEAKMGLVCRVQSTAKSKFKLLYFEPEENGGLSLALQEDSVKTGKVTSAGMFFLGFPVYRFEQNNSVAAAKDPDSAFFKRLDGFQPCEVNELKAGTHFFAVYGDNFFKSATYNIEVVCAEPFSTEKEKLRCVEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTLQRSSSSNKGKTSSKESKSDDDQTVKKEKKSKSKSMEGSRSDDDGPRKEKKPKERLRRKKWFNIHLKVDKRRPC
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0033270 | OsKeNa_02g0033270.01 | Chr02 | 31336098 | 31340695 | + | NAM | ||
| CDS seq | atggcggggtcgaagtttgggtcgttcaagtcggagaaggggagctcggcgggggcggcggcgggggccggagcggcggcgcagaggagggacccatacgaggtgcttggggtggggcgtaatgccaccgagcaggagatcaagagcgccttccgccgcatggccctcaagtaccatccagacaagaatgcagacgaccctgttgcctcggacaagtttcaagaagccacattctcttacaacatactgtcagatcccgataagaggcggcagtatgattcctcgggattcgaggccattgaagcagatagtcaggaactggagttggacctgtcaagtctgaacactgtaaatacagtgtttgctgccctgtttagcaagctaggtgtaccaatcaagaccacagtttctgcaacagttttagaggaagcattgaatgggtcggtgggaatttcccaactcgagcttggccagtccgtctttaggaaggtggaaaagcaatcagctcacttttattctgtggacataacagataaagaagccaaaatggggttagtgtgtagagttcaatcaactgctaaaagtaaattcaagttgctatatttcgagcctgaagaaaatggtgggttaagccttgctttacaggaagacagtgtaaagacagggaaagttacttctgctggaatgttctttcttggctttccagtctatcgctttgaacaaaataattcagttgctgctgcaaaggatcctgatagtgcattctttaaaagattggatggctttcaaccatgtgaagtaaatgaactaaaagcagggacccatttttttgctgtctatggtgataatttcttcaagagtgcaacctataatatagaggttgtatgtgctgaacccttttctactgaaaaggagaaactacgatgcgtggaggcaaagatacttgcaaaacgatctgagctgtctaaatttgagtctgagtatagagaggtcttagcgaagttcaccgagatgaccagcagatacgctcaagaaatgcagacgatcgacgagcttctcaaggaaaggaatgcaattcatgcatcctacaccaacaacacaactctgcaacggagttccagtagcaacaaagggaaaacatcctctaaagagtccaaaagtgatgatgaccaaactgtgaaaaaggaaaagaaatcgaagagcaagtccatggagggatccagaagtgatgatgatggtcctagaaaggaaaagaaacctaaggaacgacttcgaaggaagaaatggttcaacatccatttgaaagtagacaagagaagaccctgctga
More
|
|||||||
| Protein seq | MAGSKFGSFKSEKGSSAGAAAGAGAAAQRRDPYEVLGVGRNATEQEIKSAFRRMALKYHPDKNADDPVASDKFQEATFSYNILSDPDKRRQYDSSGFEAIEADSQELELDLSSLNTVNTVFAALFSKLGVPIKTTVSATVLEEALNGSVGISQLELGQSVFRKVEKQSAHFYSVDITDKEAKMGLVCRVQSTAKSKFKLLYFEPEENGGLSLALQEDSVKTGKVTSAGMFFLGFPVYRFEQNNSVAAAKDPDSAFFKRLDGFQPCEVNELKAGTHFFAVYGDNFFKSATYNIEVVCAEPFSTEKEKLRCVEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTLQRSSSSNKGKTSSKESKSDDDQTVKKEKKSKSKSMEGSRSDDDGPRKEKKPKERLRRKKWFNIHLKVDKRRPC
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr02 | 31339839 | 31340695 | + | OsKeNa_02g0033270.01 | OsKeNa_02g0033270.01,OsKeNa_02g0033270.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.144746 | 2.400819 | 3.001283 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0741100 | RBH | 0.423529 | 0.640577 | 3.593618 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g50760 | RBH | 0.332792 | 0.386398 | 0.801234 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0741100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0033180 | RBH | 0.352412 | 10.696655 | 5.500276 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0009140 | RBH | 0.130221 | 8.050016 | 5.208313 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0033160 | RBH | 0.849965 | 1.008809 | 5.210323 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0032760 | RBH | 0.048403 | 0.567271 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0032870 | RBH | 0.505050 | 3.301102 | 9.936652 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0508200 | SBH | 2.8431375 | 7.0069635 | 10.80541 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0032650 | RBH | 0.087456 | 0.257046 | 1.330468 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0459100 | SBH | 61.77091 | 253.7687225 | 298.247345 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0032930 | RBH | 0.037503 | 0.109648 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0032710 | RBH | 0.207679 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0033050 | RBH | 1.660525 | 16.739655 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0032900 | RBH | 0.167189 | 1.222459 | 0.401763 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0032520 | RBH | 0.053448 | 7.793516 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G033220 | RBH | 0.526086 | 6.974477 | 4.714401 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0032940 | RBH | 1.285104 | 7.263403 | 3.234298 |
