Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_02g0029950 | OGI:02080340 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr02:28905874-28909374 | ||||||||
| Gene Symbol | MKK10-1, OsMKK10-1, MPKK10.1, - | ||||||||||
| DNA seq | atggcaatggcgaagctgcgcgagcgccggcagctgcggctgtccgtgccggcgtcgccgccgccattcccgcacctggaccaccccttcgccgccctgccgtccacgccgccgggctcgcccgtcctggcggagctcgagatgctgtccgtcgtcgggcgcggcgcgggcggcacggtctacagggcgcggcaccggcgcacgggcgccgcgctcgcggtcaaggagatgcgcgacgacggcgcggcgctccgcgaggccggcgcgcacctccgcgtggccgccgcggcgcccgaccacccgtcggtcgtccgcctccacggcgtctgcgtcggccaccccgtcgccgggaaccggttcgtgtacctcgtcctcgagtacctcccggagggctccctgagcgacgtgctcgtgcggggcgccctcccggagcccgccatcgccggcgtcacgcggtgcgtgctccgtggcctgagccacctgcaccgcctcggcgtcgcgcacggcgacgtgaagccgtccaacctcctcgtcggccaccgcggcgagatcaagatcgccgacttcggcgccagccgcgtcgtcacgggccgcgacgaagcccaccaccagtcacccggcacgtgggcgtacatgagccccgagaagctccacccggaagggttcggcggcggtggcggcgccgacttctccggcgacgtgtggtccctgggagtcgtgctgctcgaatgccacgccggcaggttcccgctcgtggccgccggggagaggccggactggccggcgctcgtcctggccgtgtgcttcgccgccgcgccggaggtgcccgtcgcggcgtcgccggagttcggcggcttcgtgcggcggtgcctggagaaggactggaggaggagggccaccgtggaggagcttcttggacaccccttcgtcgcgggaaagccgtctcgttgcgagcgccaaaacgagtggcgcaccaccttccaggacaaaactggccaagtgaacacgagcatctacggagaagaatagaagatgaaattaaagtttaaaaggaaaaaacaattttgatcgcttaattggatctttgatcagagctggtaatgatgcaagtccaacgggaacgtgaatgagagaggactggttagtatagatgatcatctggacctgcatgatttggtgagtcctgaagagattttcttttgcttcacctggactaggatcagttttttggaaacaagttctgttaggattttcagggaaataagttaataagatagagggctttggtttatttgtggtttatcggaaacaactacacgtcgggcgctcgatccgggataaaaaaaatcaggtgcccacgtcatgctgacgtcagcaagcatgcatgcatgcaaaactattttaaactattttttctcttaaattatttatccaaatcatgatccgattgcactgttaaattcgttgcaattaaatctttaaaacaagaccatacatggatatattccgataaaaaattagcttattattgaattatttttaaatgttgcacgatgttccaacaagtatatcggaattgtttcactaactagatcgaaaatgtttcaatcgtttaaatcggatgtcatttcaccttatataaaaacaatgtttcagtaaatagcgaaaaaatatttcagtttactgcaatatttgatccatatagtgaaacattataagtacactaggtgaaacatttttggtggaacaaaaaatgaaacgaattcccttaatagagggtttccataatatgagtgttttgttgcaaaagaatgtttcaattcactgcaacattacatctatacatagtaaaacattgtgagtacactaggtgaaatattttttgtggtacaaaaaaataaaacgaattcccttaatagagggtttccaaaatatgtgggtgatttattgcaatggagtatgtggtgaagacacgtgtgtcaggtggcagggatacgtggggcacgtgtgcgcgttgggagggggagcgaccgattatgctccctcccccgagcgatcgagtaggaggattatcatggtttatcagataattatccgtataaatctgagatatttataaaacttcttatcgttgaaggataaaactgaactaatcacgaaccctctgtgcaaacagctgaacttctcgagggcggaaaggcatgtggaaatgtggttatgatcaagatttttgctgggccatgagcctaggcctgctggctacggaagtccattgaaataagttcactggaggtccctcaacttaatagctagatcttttaggtcctttaaccacaaaatcagaaatgtgtacccctaaacacacaaaccgtgcactcacgacttgtttggtaactcaagagaaggggattgggagtttacacgagggaaatgatgatgagattaagatgtaaatttgatttttaatcccaatatcttgtttggtagaggtgatggaaattgatagggagtttagttggagattagatcattaataaaaacggatggctgagatttgtttagataaagtaaaggaggaattccctcccaattacctgcccctacccaggtattgaaaatgagggagtttcttcctcaattccccatccccatcccaccaaaattcccatgtctcccaaccaaacaaaacacttaatagcatcatccctctaaactcccaatctctcctaaaaactccctccaaccaaacgggccgtcaaggtcctatggcagtatatatgggtggtttcgccgacgtggcatcctagtcagcaaaaaaaataaaaaaagtatgtgaggcccacatatcagttgcactttttttttcctcttttctctcttctgtctcttctctcttctattctgcggcgggtggtgtggcaatggcggcgtgcttccgctgcgcgcggcacggcgtctggccccacggggcccagcctggcgacctccgtctacgatactcacctcggccttgccacgctgtcctggacgcgcacctccctcagcctctcgctccgcgccatgctccacctctcgtccccggccaccccagcgtccaactcagtagcgggggtggggatatacttcgataaggacaccgacggggagaccctagcctttcgtgtccgcccctggctccacgactgccgcgtcgagcacctccgccacctcgacctctctaggaacagcctcaacagcatcttgccagcgaagctgctcaacgcgaccgagctccgggtgctctcacttgccgacaatgacatctctagcgtgctccccaatggcggctccgtctcgtacttgctcagcctccaggagctcaacctgtcgaacaacgcgctcgccgggcgcctcccgcccgctctctacaggctgccgagcctcgccgtgcttggtctcaccaacaactacctcatcggcgatctcgctgccttggagggcgtcgacttgagcgccaactaa
More
|
||||||||||
| CDS seq | atggcaatggcgaagctgcgcgagcgccggcagctgcggctgtccgtgccggcgtcgccgccgccattcccgcacctggaccaccccttcgccgccctgccgtccacgccgccgggctcgcccgtcctggcggagctcgagatgctgtccgtcgtcgggcgcggcgcgggcggcacggtctacagggcgcggcaccggcgcacgggcgccgcgctcgcggtcaaggagatgcgcgacgacggcgcggcgctccgcgaggccggcgcgcacctccgcgtggccgccgcggcgcccgaccacccgtcggtcgtccgcctccacggcgtctgcgtcggccaccccgtcgccgggaaccggttcgtgtacctcgtcctcgagtacctcccggagggctccctgagcgacgtgctcgtgcggggcgccctcccggagcccgccatcgccggcgtcacgcggtgcgtgctccgtggcctgagccacctgcaccgcctcggcgtcgcgcacggcgacgtgaagccgtccaacctcctcgtcggccaccgcggcgagatcaagatcgccgacttcggcgccagccgcgtcgtcacgggccgcgacgaagcccaccaccagtcacccggcacgtgggcgtacatgagccccgagaagctccacccggaagggttcggcggcggtggcggcgccgacttctccggcgacgtgtggtccctgggagtcgtgctgctcgaatgccacgccggcaggttcccgctcgtggccgccggggagaggccggactggccggcgctcgtcctggccgtgtgcttcgccgccgcgccggaggtgcccgtcgcggcgtcgccggagttcggcggcttcgtgcggcggtgcctggagaaggactggaggaggagggccaccgtggaggagcttcttggacaccccttcgtcgcgggaaagccgtctcgttgcgagcgccaaaacgagtggcgcaccaccttccaggacaaaactggccaaaccctagcctttcgtgtccgcccctggctccacgactgccgcgtcgagcacctccgccacctcgacctctctaggaacagcctcaacagcatcttgccagcgaagctgctcaacgcgaccgagctccgggtgctctcacttgccgacaatgacatctctagcgtgctccccaatggcggctccgtctcgtacttgctcagcctccaggagctcaacctgtcgaacaacgcgctcgccgggcgcctcccgcccgctctctacaggctgccgagcctcgccgtgcttggtctcaccaacaactacctcatcggcgatctcgctgccttggagggcgtcgacttgagcgccaactaa
More
|
||||||||||
| Protein seq | MAMAKLRERRQLRLSVPASPPPFPHLDHPFAALPSTPPGSPVLAELEMLSVVGRGAGGTVYRARHRRTGAALAVKEMRDDGAALREAGAHLRVAAAAPDHPSVVRLHGVCVGHPVAGNRFVYLVLEYLPEGSLSDVLVRGALPEPAIAGVTRCVLRGLSHLHRLGVAHGDVKPSNLLVGHRGEIKIADFGASRVVTGRDEAHHQSPGTWAYMSPEKLHPEGFGGGGGADFSGDVWSLGVVLLECHAGRFPLVAAGERPDWPALVLAVCFAAAPEVPVAASPEFGGFVRRCLEKDWRRRATVEELLGHPFVAGKPSRCERQNEWRTTFQDKTGQTLAFRVRPWLHDCRVEHLRHLDLSRNSLNSILPAKLLNATELRVLSLADNDISSVLPNGGSVSYLLSLQELNLSNNALAGRLPPALYRLPSLAVLGLTNNYLIGDLAALEGVDLSAN |
||||||||||
| Function | Mitogen-activated protein kinase kinase 10 [UniProtKB/Swiss-Prot:Q9LQM8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0029950 | OsKeNa_02g0029950.01 | Chr02 | 28905874 | 28909374 | + | NAM | ||
| CDS seq | atggcaatggcgaagctgcgcgagcgccggcagctgcggctgtccgtgccggcgtcgccgccgccattcccgcacctggaccaccccttcgccgccctgccgtccacgccgccgggctcgcccgtcctggcggagctcgagatgctgtccgtcgtcgggcgcggcgcgggcggcacggtctacagggcgcggcaccggcgcacgggcgccgcgctcgcggtcaaggagatgcgcgacgacggcgcggcgctccgcgaggccggcgcgcacctccgcgtggccgccgcggcgcccgaccacccgtcggtcgtccgcctccacggcgtctgcgtcggccaccccgtcgccgggaaccggttcgtgtacctcgtcctcgagtacctcccggagggctccctgagcgacgtgctcgtgcggggcgccctcccggagcccgccatcgccggcgtcacgcggtgcgtgctccgtggcctgagccacctgcaccgcctcggcgtcgcgcacggcgacgtgaagccgtccaacctcctcgtcggccaccgcggcgagatcaagatcgccgacttcggcgccagccgcgtcgtcacgggccgcgacgaagcccaccaccagtcacccggcacgtgggcgtacatgagccccgagaagctccacccggaagggttcggcggcggtggcggcgccgacttctccggcgacgtgtggtccctgggagtcgtgctgctcgaatgccacgccggcaggttcccgctcgtggccgccggggagaggccggactggccggcgctcgtcctggccgtgtgcttcgccgccgcgccggaggtgcccgtcgcggcgtcgccggagttcggcggcttcgtgcggcggtgcctggagaaggactggaggaggagggccaccgtggaggagcttcttggacaccccttcgtcgcgggaaagccgtctcgttgcgagcgccaaaacgagtggcgcaccaccttccaggacaaaactggccaaaccctagcctttcgtgtccgcccctggctccacgactgccgcgtcgagcacctccgccacctcgacctctctaggaacagcctcaacagcatcttgccagcgaagctgctcaacgcgaccgagctccgggtgctctcacttgccgacaatgacatctctagcgtgctccccaatggcggctccgtctcgtacttgctcagcctccaggagctcaacctgtcgaacaacgcgctcgccgggcgcctcccgcccgctctctacaggctgccgagcctcgccgtgcttggtctcaccaacaactacctcatcggcgatctcgctgccttggagggcgtcgacttgagcgccaactaa
More
|
|||||||
| Protein seq | MAMAKLRERRQLRLSVPASPPPFPHLDHPFAALPSTPPGSPVLAELEMLSVVGRGAGGTVYRARHRRTGAALAVKEMRDDGAALREAGAHLRVAAAAPDHPSVVRLHGVCVGHPVAGNRFVYLVLEYLPEGSLSDVLVRGALPEPAIAGVTRCVLRGLSHLHRLGVAHGDVKPSNLLVGHRGEIKIADFGASRVVTGRDEAHHQSPGTWAYMSPEKLHPEGFGGGGGADFSGDVWSLGVVLLECHAGRFPLVAAGERPDWPALVLAVCFAAAPEVPVAASPEFGGFVRRCLEKDWRRRATVEELLGHPFVAGKPSRCERQNEWRTTFQDKTGQTLAFRVRPWLHDCRVEHLRHLDLSRNSLNSILPAKLLNATELRVLSLADNDISSVLPNGGSVSYLLSLQELNLSNNALAGRLPPALYRLPSLAVLGLTNNYLIGDLAALEGVDLSAN
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0029950 | OsKeNa_02g0029950.02 | Chr02 | 28905879 | 28907307 | + | IsoSeq | ||
| CDS seq | tggcgaagctgcgcgagcgccggcagctgcggctgtccgtgccggcgtcgccgccgccattcccgcacctggaccaccccttcgccgccctgccgtccacgccgccgggctcgcccgtcctggcggagctcgagatgctgtccgtcgtcgggcgcggcgcgggcggcacggtctacagggcgcggcaccggcgcacgggcgccgcgctcgcggtcaaggagatgcgcgacgacggcgcggcgctccgcgaggccggcgcgcacctccgcgtggccgccgcggcgcccgaccacccgtcggtcgtccgcctccacggcgtctgcgtcggccaccccgtcgccgggaaccggttcgtgtacctcgtcctcgagtacctcccggagggct
More
|
|||||||
| Protein seq | WRSCASAGSCGCPCRRRRRHSRTWTTPSPPCRPRRRARPSWRSSRCCPSSGAARAARSTGRGTGARAPRSRSRRCATTARRSARPARTSAWPPRRPTTRRSSASTASASATPSPGTGSCTSSSSTSRRA |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0694900 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g46760 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0694900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0029880 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0020770 | SBH | 0.105041 | 0.0 | 0.520872 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0029810 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0029410 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0029620 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0463500 | RBH | 0.0272465 | 0.048035 | 0.0077415 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0029420 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0491400 | RBH | 0.060989 | 0 | 0.1290385 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0029720 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0029460 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0029770 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0029610 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0029290 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G029870 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0029640 | RBH | 0.0 | 0.0 | 0.0 |
