Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_02g0028280 | OGI:02076520 | 15/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr02:27416159-27418274 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ggaaaagaagaaaatgtctcttaagaatagaataaaataaatataatagttggctggtcaccaacacaaactaactcgaacaaatactatcaaagtactctgcatcttagctacatcacaaattattgctctttctttagttctcttttttgcttctccgcttctgctctctcagatccaaatccaagtagatctcgtctttgcaaaaaaaaaaaaatccaagtttctctgatccggatggtaaattcagagaagaagcggcttaaatgttcccaccaaacccatttaatttacttactgtctcgtactctctctttatctacacattgaatgttccatgcctccatcagcacgaatcttggcgcgagcggggccctcggatcttctacgcgcatggtgcggtggccctcacgtccgcgccgcggagctcgtcggcgacgggcgcgaggtcgcgtggacgtacctccattcggagcccgttcttcatgaagagcgtgagggacatcttctgctcgactcggtgtccctgcgcgacggcgaggcggtggcggaggagcacgctcccggcgatgttcttcatctgcaggtaggcgaggtccttgccgaggcaaatcctcggcccggcgttgaacgcgacgaacttgtacgagtcgtgcggctcgaacttggagccgtcggccgacagccaccgctccggcctgaactcgaggcagtcctccccccacaccgtcttcatgcgccccgccgagtatatggagtacgtgaccgacgagccggccggcacgaacgtgccgtccgggaggtagtcgtcggcgacgacgtgcttggagtcctctgggacggaggggtacaagcggagtgtctccgagagcgccgccttgaggtagaccagactgtcgagctcctcgaaggtgaagggcgccgccagccacaatgccgggtcatgggcgccccgggacgccgcgagcacggcgcagagctcgtgcacgaccttgcgctccacggcggggtgggtggacacgagccagaagaaccaggagagcgccacggaggatgtgtcgcggcccgcgaggatgaagttgagcgccacgtgctgcagcgactcgtccgagtaggagcccttccgcatgaaccgggacagcaggtcgtcatgcatcgccacggtgtcgcacttgccgttgcccgcgagctcgagcttgcgcgccttgatgacggcggcgaggtactggtcgacgtgcgcgacgctgctggccagcgtggtctccatgccgaggcccagccacttcttgcagcgccacaggtactccgggaagatgaaccggttgagcgtggcctcggtcgcgcggtcgaacgcggaggcgaaggcgttctccggcaagcccttggcgagcgtctcggggtccttgccgaacgccaggccgcagatgttgtcgaaggtgaggcggaggaggaggtcctgcaggtcgacgtgcgccttgccggcggccgcgtcgtccaggatgggcagcagccggtggtggatggaccgcgagacccacctggacattgccgtccgcagcgtgcgcgtggtgaactcgagcgccgccgtcttccgctgcgcgacccacgtctcgccgtcggagttgaagatgccgtcgccgagcaggtcgcggaagacggcgtgccagaaggggcccttggggtagttgtcgaaccgcgacttgaggacgtgctccaggttgcgcgggtcgcaggtgacggtgaccagcccgccgcggcgcgccaccccgggcaccgcgaagatgcacgtctggtacgtgccgccggcgcggcgcaggttggcggcgatccactcgtgcatgttctcggcgtgctgcaccagcccaggcaggctgccgaccaccggccacacacgcggcccgctcagcccccgggacatccgccagaaccacgtcatgtacgccgccgccaccgccaccaccaccgcccacgtccccacctccattttcctctggcaacaaactctgtaatgtacgtacagctgctagctagggctgtatggatccgatgagaatgcccggtgatggctagctacactgcgctaagtgactccacatggagcaagcaatgaggatgg
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| CDS seq | atggaggtggggacgtgggcggtggtggtggcggtggcggcggcgtacatgacgtggttctggcggatgtcccgggggctgagcgggccgcgtgtgtggccggtggtcggcagcctgcctgggctggtgcagcacgccgagaacatgcacgagtggatcgccgccaacctgcgccgcgccggcggcacgtaccagacgtgcatcttcgcggtgcccggggtggcgcgccgcggcgggctggtcaccgtcacctgcgacccgcgcaacctggagcacgtcctcaagtcgcggttcgacaactaccccaagggccccttctggcacgccgtcttccgcgacctgctcggcgacggcatcttcaactccgacggcgagacgtgggtcgcgcagcggaagacggcggcgctcgagttcaccacgcgcacgctgcggacggcaatgtccaggtgggtctcgcggtccatccaccaccggctgctgcccatcctggacgacgcggccgccggcaaggcgcacgtcgacctgcaggacctcctcctccgcctcaccttcgacaacatctgcggcctggcgttcggcaaggaccccgagacgctcgccaagggcttgccggagaacgccttcgcctccgcgttcgaccgcgcgaccgaggccacgctcaaccggttcatcttcccggagtacctgtggcgctgcaagaagtggctgggcctcggcatggagaccacgctggccagcagcgtcgcgcacgtcgaccagtacctcgccgccgtcatcaaggcgcgcaagctcgagctcgcgggcaacggcaagtgcgacaccgtggcgatgcatgacgacctgctgtcccggttcatgcggaagggctcctactcggacgagtcgctgcagcacgtggcgctcaacttcatcctcgcgggccgcgacacatcctccgtggcgctctcctggttcttctggctcgtgtccacccaccccgccgtggagcgcaaggtcgtgcacgagctctgcgccgtgctcgcggcgtcccggggcgcccatgacccggcattgtggctggcggcgcccttcaccttcgaggagctcgacagtctggtctacctcaaggcggcgctctcggagacactccgcttgtacccctccgtcccagaggactccaagcacgtcgtcgccgacgactacctcccggacggcacgttcgtgccggccggctcgtcggtcacgtactccatatactcggcggggcgcatgaagacggtgtggggggaggactgcctcgagttcaggccggagcggtggctgtcggccgacggctccaagttcgagccgcacgactcgtacaagttcgtcgcgttcaacgccgggccgaggatttgcctcggcaaggacctcgcctacctgcagatgaagaacatcgccgggagcgtgctcctccgccaccgcctcgccgtcgcgcagggacaccgagtcgagcagaagatgtccctcacgctcttcatgaagaacgggctccgaatggaggtacgtccacgcgacctcgcgcccgtcgccgacgagctccgcggcgcggacgtgagggccaccgcaccatgcgcgtag
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| Protein seq | MEVGTWAVVVAVAAAYMTWFWRMSRGLSGPRVWPVVGSLPGLVQHAENMHEWIAANLRRAGGTYQTCIFAVPGVARRGGLVTVTCDPRNLEHVLKSRFDNYPKGPFWHAVFRDLLGDGIFNSDGETWVAQRKTAALEFTTRTLRTAMSRWVSRSIHHRLLPILDDAAAGKAHVDLQDLLLRLTFDNICGLAFGKDPETLAKGLPENAFASAFDRATEATLNRFIFPEYLWRCKKWLGLGMETTLASSVAHVDQYLAAVIKARKLELAGNGKCDTVAMHDDLLSRFMRKGSYSDESLQHVALNFILAGRDTSSVALSWFFWLVSTHPAVERKVVHELCAVLAASRGAHDPALWLAAPFTFEELDSLVYLKAALSETLRLYPSVPEDSKHVVADDYLPDGTFVPAGSSVTYSIYSAGRMKTVWGEDCLEFRPERWLSADGSKFEPHDSYKFVAFNAGPRICLGKDLAYLQMKNIAGSVLLRHRLAVAQGHRVEQKMSLTLFMKNGLRMEVRPRDLAPVADELRGADVRATAPCA |
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| Function | Cytochrome P450 86A22 [UniProtKB/Swiss-Prot:B3RFJ6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0028280 | OsKeNa_02g0028280.01 | Chr02 | 27416179 | 27418250 | - | NAM | ||
| CDS seq | atggaggtggggacgtgggcggtggtggtggcggtggcggcggcgtacatgacgtggttctggcggatgtcccgggggctgagcgggccgcgtgtgtggccggtggtcggcagcctgcctgggctggtgcagcacgccgagaacatgcacgagtggatcgccgccaacctgcgccgcgccggcggcacgtaccagacgtgcatcttcgcggtgcccggggtggcgcgccgcggcgggctggtcaccgtcacctgcgacccgcgcaacctggagcacgtcctcaagtcgcggttcgacaactaccccaagggccccttctggcacgccgtcttccgcgacctgctcggcgacggcatcttcaactccgacggcgagacgtgggtcgcgcagcggaagacggcggcgctcgagttcaccacgcgcacgctgcggacggcaatgtccaggtgggtctcgcggtccatccaccaccggctgctgcccatcctggacgacgcggccgccggcaaggcgcacgtcgacctgcaggacctcctcctccgcctcaccttcgacaacatctgcggcctggcgttcggcaaggaccccgagacgctcgccaagggcttgccggagaacgccttcgcctccgcgttcgaccgcgcgaccgaggccacgctcaaccggttcatcttcccggagtacctgtggcgctgcaagaagtggctgggcctcggcatggagaccacgctggccagcagcgtcgcgcacgtcgaccagtacctcgccgccgtcatcaaggcgcgcaagctcgagctcgcgggcaacggcaagtgcgacaccgtggcgatgcatgacgacctgctgtcccggttcatgcggaagggctcctactcggacgagtcgctgcagcacgtggcgctcaacttcatcctcgcgggccgcgacacatcctccgtggcgctctcctggttcttctggctcgtgtccacccaccccgccgtggagcgcaaggtcgtgcacgagctctgcgccgtgctcgcggcgtcccggggcgcccatgacccggcattgtggctggcggcgcccttcaccttcgaggagctcgacagtctggtctacctcaaggcggcgctctcggagacactccgcttgtacccctccgtcccagaggactccaagcacgtcgtcgccgacgactacctcccggacggcacgttcgtgccggccggctcgtcggtcacgtactccatatactcggcggggcgcatgaagacggtgtggggggaggactgcctcgagttcaggccggagcggtggctgtcggccgacggctccaagttcgagccgcacgactcgtacaagttcgtcgcgttcaacgccgggccgaggatttgcctcggcaaggacctcgcctacctgcagatgaagaacatcgccgggagcgtgctcctccgccaccgcctcgccgtcgcgcagggacaccgagtcgagcagaagatgtccctcacgctcttcatgaagaacgggctccgaatggaggtacgtccacgcgacctcgcgcccgtcgccgacgagctccgcggcgcggacgtgagggccaccgcaccatgcgcgtag
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| Protein seq | MEVGTWAVVVAVAAAYMTWFWRMSRGLSGPRVWPVVGSLPGLVQHAENMHEWIAANLRRAGGTYQTCIFAVPGVARRGGLVTVTCDPRNLEHVLKSRFDNYPKGPFWHAVFRDLLGDGIFNSDGETWVAQRKTAALEFTTRTLRTAMSRWVSRSIHHRLLPILDDAAAGKAHVDLQDLLLRLTFDNICGLAFGKDPETLAKGLPENAFASAFDRATEATLNRFIFPEYLWRCKKWLGLGMETTLASSVAHVDQYLAAVIKARKLELAGNGKCDTVAMHDDLLSRFMRKGSYSDESLQHVALNFILAGRDTSSVALSWFFWLVSTHPAVERKVVHELCAVLAASRGAHDPALWLAAPFTFEELDSLVYLKAALSETLRLYPSVPEDSKHVVADDYLPDGTFVPAGSSVTYSIYSAGRMKTVWGEDCLEFRPERWLSADGSKFEPHDSYKFVAFNAGPRICLGKDLAYLQMKNIAGSVLLRHRLAVAQGHRVEQKMSLTLFMKNGLRMEVRPRDLAPVADELRGADVRATAPCA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0028280 | OsKeNa_02g0028280.02 | Chr02 | 27416159 | 27418274 | - | IsoSeq | ||
| CDS seq | atgcgcgtagaagatccgagggccccgctcgcgccaagattcgtgctgatggaggcatggaacattcaatgtgtagataaagagagagtacgagacagt |
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| Protein seq | MRVEDPRAPLAPRFVLMEAWNIQCVDKERVRDS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.150776 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0666500 | RBH | 0.0 | 0.0 | 4.490306 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g44654 | RBH | 0.0 | 0.0 | 1.114033 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0666500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0028180 | RBH | 0.0 | 0.980905 | 1.962775 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0023540 | RBH | 0.0 | 0.000000 | 0.272336 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0028120 | RBH | 0.0 | 0.0 | 3.117959 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0027740 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0027870 | RBH | 0.000000 | 0.000000 | 1.532895 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0378900 | SBH | 0.1911475 | 0.002493 | 0.0294085 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0027680 | RBH | 0.0 | 0.188825 | 0.110213 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0467000 | RBH | 8.5742745 | 0.691798 | 24.9724625 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0028010 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0027710 | RBH | 0.0 | 1.531966 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0028010 | RBH | 0.0 | 1.295863 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0027880 | RBH | 0.0 | 0.113087 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0027580 | RBH | 0.0 | 0.703179 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G028150 | RBH | 0.0 | 0.0 | 2.309253 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0027920 | RBH | 0.0 | 0.000000 | 1.047794 |
