Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_02g0026930 | OGI:02073240 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr02:26212345-26213824 | ||||||||
| Gene Symbol | NAC52, ONAC052, ONAC52 | ||||||||||
| DNA seq | ctatttccacagatcagcctcgccgccgccggagccggccgacgtcgaagcgtagtccaaagcctcttcatgcttgccaccgtctgcagcctgaaacacctgagccggatgggatccgtagctggacatggactccttgctgagcagctgagacgcgacgaacttgtccagtagcctccagtccgtcaccgacgcgtcgacgccgatgccgacgccggcgccggccatgtaaacagcctccaacgacggcggctgctgctgcgcggcggagccggaggcttcgtcgtcgtgagtagtaagggcggtggacgacgacgatccgaggtggccgccaatgtaggccgccgccgcaggaggcggcggcggcggcttggggctctccagctgaggaagatgctgcaggaaggcctcctgcggcaggaggtggtggtactccagctccggcttgcagtgaccgtacatctgctgcagctgctggtggtggtggccgtggtacagcgccgccgacgagcccgggtggtggtggtggtggtgcggcagtagctgcctcggcgagctgaggtccggcatgaacgcaccgacggcgccgtggtcatcgaaccagcacggtgatccgtcggccattctccgcaccgtcgccacccgcttcttgaacacccggcagaccacccatccttcctcctacacgcaccaatgatcagtcaaccacttagtcagacttaggtgcatgaggcggattttgaccgaatctcattctaaacatcaagagatttattccgatccaataaaaaatatctcaagttacctcatgataccaaatcatttctgatcgtttgatctagctgagcagggtgggcattgttagatcgaatgataaaaaacaatttggtatcataagatacggtaccttttaattggaccggagcaaatcccaaacatcaaatatatgcatacaggtgtggtgccgttttcgttggtctcgaggcggtactcgtgcatgatccagtccgacttctggccattgggggcacggcccttgtagaagacgagtgtcttcctcatcccgacgaggcagctgcgggcgtagatgggcttgtccctccccgtcgccttccagaagccggcgcccgtggcccggttggtgcgggtgcccgtcgggtactttttgtctttgtggctgaagaagtaccagtcattctgttcttccatgccaatcttgcacttctctgcaatatttgtacatgttggatgctcaattcaatcgcaaacctaactttgatttttttgattcttcgatcaacttgcatgcatgccaattaccttggagatcccagggctcgattttgtacaggtcgacgtcttttataacgtcgaggtcgattttcttcgatgccaccttcttcctcaggtagtaatcgacgagctcctcgtcagtagggtgaaagcggaaaccaggtggcacatgggagaaagtgtccat
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| CDS seq | atggacactttctcccatgtgccacctggtttccgctttcaccctactgacgaggagctcgtcgattactacctgaggaagaaggtggcatcgaagaaaatcgacctcgacgttataaaagacgtcgacctgtacaaaatcgagccctgggatctccaagagaagtgcaagattggcatggaagaacagaatgactggtacttcttcagccacaaagacaaaaagtacccgacgggcacccgcaccaaccgggccacgggcgccggcttctggaaggcgacggggagggacaagcccatctacgcccgcagctgcctcgtcgggatgaggaagacactcgtcttctacaagggccgatgggtggtctgccgggtgttcaagaagcgggtggcgacggtgcggagaatggccgacggatcaccgtgctggttcgatgaccacggcgccgtcggtgcgttcatgccggacctcagctcgccgaggcagctactgccgcaccaccaccaccaccacccgggctcgtcggcggcgctgtaccacggccaccaccaccagcagctgcagcagatgtacggtcactgcaagccggagctggagtaccaccacctcctgccgcaggaggccttcctgcagcatcttcctcagctggagagccccaagccgccgccgccgcctcctgcggcggcggcctacattggcggccacctcggatcgtcgtcgtccaccgcccttactactcacgacgacgaagcctccggctccgccgcgcagcagcagccgccgtcgttggaggctgtttacatggccggcgccggcgtcggcatcggcgtcgacgcgtcggtgacggactggaggctactggacaagttcgtcgcgtctcagctgctcagcaaggagtccatgtccagctacggatcccatccggctcaggtgtttcaggctgcagacggtggcaagcatgaagaggctttggactacgcttcgacgtcggccggctccggcggcggcgaggctgatctgtggaaatag
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| Protein seq | MDTFSHVPPGFRFHPTDEELVDYYLRKKVASKKIDLDVIKDVDLYKIEPWDLQEKCKIGMEEQNDWYFFSHKDKKYPTGTRTNRATGAGFWKATGRDKPIYARSCLVGMRKTLVFYKGRWVVCRVFKKRVATVRRMADGSPCWFDDHGAVGAFMPDLSSPRQLLPHHHHHHPGSSAALYHGHHHQQLQQMYGHCKPELEYHHLLPQEAFLQHLPQLESPKPPPPPPAAAAYIGGHLGSSSSTALTTHDDEASGSAAQQQPPSLEAVYMAGAGVGIGVDASVTDWRLLDKFVASQLLSKESMSSYGSHPAQVFQAADGGKHEEALDYASTSAGSGGGEADLWK |
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| Function | NAC domain-containing protein 7 [UniProtKB/Swiss-Prot:Q9FWX2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0026930 | OsKeNa_02g0026930.01 | Chr02 | 26212345 | 26213824 | - | NAM | ||
| CDS seq | atggacactttctcccatgtgccacctggtttccgctttcaccctactgacgaggagctcgtcgattactacctgaggaagaaggtggcatcgaagaaaatcgacctcgacgttataaaagacgtcgacctgtacaaaatcgagccctgggatctccaagagaagtgcaagattggcatggaagaacagaatgactggtacttcttcagccacaaagacaaaaagtacccgacgggcacccgcaccaaccgggccacgggcgccggcttctggaaggcgacggggagggacaagcccatctacgcccgcagctgcctcgtcgggatgaggaagacactcgtcttctacaagggccgatgggtggtctgccgggtgttcaagaagcgggtggcgacggtgcggagaatggccgacggatcaccgtgctggttcgatgaccacggcgccgtcggtgcgttcatgccggacctcagctcgccgaggcagctactgccgcaccaccaccaccaccacccgggctcgtcggcggcgctgtaccacggccaccaccaccagcagctgcagcagatgtacggtcactgcaagccggagctggagtaccaccacctcctgccgcaggaggccttcctgcagcatcttcctcagctggagagccccaagccgccgccgccgcctcctgcggcggcggcctacattggcggccacctcggatcgtcgtcgtccaccgcccttactactcacgacgacgaagcctccggctccgccgcgcagcagcagccgccgtcgttggaggctgtttacatggccggcgccggcgtcggcatcggcgtcgacgcgtcggtgacggactggaggctactggacaagttcgtcgcgtctcagctgctcagcaaggagtccatgtccagctacggatcccatccggctcaggtgtttcaggctgcagacggtggcaagcatgaagaggctttggactacgcttcgacgtcggccggctccggcggcggcgaggctgatctgtggaaatag
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| Protein seq | MDTFSHVPPGFRFHPTDEELVDYYLRKKVASKKIDLDVIKDVDLYKIEPWDLQEKCKIGMEEQNDWYFFSHKDKKYPTGTRTNRATGAGFWKATGRDKPIYARSCLVGMRKTLVFYKGRWVVCRVFKKRVATVRRMADGSPCWFDDHGAVGAFMPDLSSPRQLLPHHHHHHPGSSAALYHGHHHQQLQQMYGHCKPELEYHHLLPQEAFLQHLPQLESPKPPPPPPAAAAYIGGHLGSSSSTALTTHDDEASGSAAQQQPPSLEAVYMAGAGVGIGVDASVTDWRLLDKFVASQLLSKESMSSYGSHPAQVFQAADGGKHEEALDYASTSAGSGGGEADLWK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 1.045099 | 0.217756 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0643600 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g42970 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0643600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0026820 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0022030 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0026800 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0026380 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0026480 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0420900 | RBH | 0.6592265 | 2.0402395 | 0.908117 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0026290 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0448800 | RBH | 0.5908355 | 1.6398645 | 0.8923895 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0026650 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0026310 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0026680 | RBH | 0.0 | 6.970218 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0026490 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0026180 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G026800 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0026530 | RBH | 0.0 | 0.0 | 0.0 |
