Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_02g0021480 | OGI:02060970 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr02:21398275-21402025 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | acatgttccgtggctaactgacgaccaaaccactgccttactgtcttactcccttcctcgtcgatggatgtcgtcaagaaggcggcggcggcggcggaagaggaggaggtccacggcgtggtcatcgtcggcggcggcctctgcggcctcgccaccgcgctcgccctccaccggtacgccgtcgtttcatacttgttctggaattaattaactctgaacacgccgtatatatagaaataaattgtgtatctgctgttaattggatgcagcaaagggatggggagcctcgtggtggagaggtcggaggcgctgcgtgtcggcggcgtggcgctcaacgtccacgccaacgggtggcgcgccctcgaggagctcggcctcgccgacggcctccggaaaaccgccaacctcatcacctcgtaagcataaatcgatcacttcttacggtggcctctatggcgaggacggtgcaattcatctgtgtgtgtcgtttcttcttcgctggggcttttatttcttagggttcgcatggtgcggcagatccagggcaagaaccagaccaccgtctcatctcccaggtgacgcgtgatcatcgatcagttctgccataccatcgatcagtttattactagttccattttgttgtttttttatattaaaaaaaactggcttatcagttactcctatgcgagatgtaggaaggagatccgatgcttgagaaggaaggacgtgatggaggcactggccaagagcgtccccgcgcacacgatccgctacggctgccgcatcgtggccgtcgatgaagaccccggcaccgactgtaccgtcctcaccatggccgacgacagcaccatcaaggccaaggtcaacaaatgctactagctctgtcctaaaatatacttcttccgtcttaaaatataagcattttaagatcctgacacagtttttgagatactactttgacaaacaatatttataaaagtaagatgttttaaataaaaaagagttacatattatgataatttgtttaatgataaatctagcaacattaattttatatgattgatcttttttttctattaatggtcaaagttaaaaatgtttgatttatcattgtactaaaaatatttatattttgggatggaggaaatagtaacttactctatttatattcgtggtaatagaatgtgtatatattttaaaacgatccatcatcggtcgattaattagaagtggattaataagtgtgattaatcgattctatgagttaataatggaggacttttacggtacattctactgctagtatatactatcagtatatttgatctaatggtgtaaattcatctgatcttcctcccaaatatcttgcagtataaattgtttagggtatatttatctttttatctatttgcgtgggggggggtaattttttaaattcgcgtttcctcatttggtcagatccgatcgatagctgcccacccagtcgaagccctttttttttctcgatgctgcgcgcatgggcaatcgtcgccgctaatttcttctgcgagctgccgacgaccacaatcggtgccgccgcgccgccgttctttcttaattaagttcaatgaattaaggacttggtatgtgttagggattcagacacttagaaactgatcgaatcaagaatgtatgagataatccacttcattgctgtgaacagatcaaatctatttacattattatgtggttttatccctgaccagttttttccctagtgttcttatgcaaatcatgcccattgcaaactcaatctactagattaaatccaatcgtcgaaggaatcgctacgcctccactcacgccatcgccacgcacgatgggagcgctacaacgcccggacgacgagatccaggaactcccgattgaatttaatcacaagaaataaatctcaatttcaaattattaaacaacccttttaagagttttaacaaataccaaatctaccctttcacatactgctaataccaaatctatcctttcacatactgctagtatcaaatctaccctttcacatactgctagtatatactagcagtagaatgtaccgtaaaaagtcctctaataatgttatacaggtggtgattggttgcgacgggtggaactcggtggtggccaggtacgtggggctaggcgcgccgtcgcagctccctcgtttcatcgtcctcggcttcgcgagctacccagaggggcacccgtttgggaccgagttctcgcaaatcatagcggatgattttgccgtcggacgggtgcccattaacgaaaatctgttgcatttcttcgtaagcaggagtccctcaccaggtataattaattaacctatggtttaataatggcattggcaggtaatttaattttaagcattaattaatttataaagtacacatgtgtcctgtaatattttgattcggatttacggttccttgatagtcgacgttttgataaagatgaagtcaaactttttaaaaaatttaactattaataacttttaaaaatatttagtttgatgatactaaagcaaacatatataaatttatcaaacaaagtactgtaataaaaataaaaatttgtttatttatttattgtatattactttctccgtttcacaatgtaagtcatcctaacattttccacattcatattgatgctaatgaatatatatatatatatataatggattcattaacattaatataaatatggaaaatgctataatgtcttacattgtgaaatggagggagtacaatagaaaaatatggtaaaagataggagtaatatcactgtccaaaattaagaattacggagatgagtgactaattaattaactttgtcaagaacgtgtttatcgatccaggacgtacggacgttgatgaggacgcggcgaggaagtacgtgctggagaaggtcgacgagctccccggcgaggtcgccgacatggtgcgtcggtgcgacgcggcgtcgagctggacgctgacgaaggtgtggtaccggccgccgtggcaggtggcgctcgccgggttccggcgcggcgcggtgacggtcgccggcgacgcgatgcacgccatggggcccttcatcggccagggcggctccgcggggctggaggacgccgtcgtgctcgcccgctcgctgtcgtcggcggcggccggcgatggccgggcgccgccgcgtcagcagctgcgcgacgacgccgtcggcgcggcgatagacgagtacgtcgcggagaggcggcggagggcgacgacgctgtgcctgcacagcttcgccatcgggacgttgctgacgacgaggtggctcgccgtgaagctcgcgtgcgtcgccgtcctggcgctcctcggcggcgactcgcgccgtgatgcggactacgactgcggccgcctctagcggaccatccgtttcgtttattcgcgaaacaagtcaaacgatatatttataaactaaaagtaatttgtttttatatacgtgttcttaacgatcaaaaagcaaatgctgaaaataaacttcgatgaagaaatctcaaaaccagctttaaatttaatgttgcaaattcaaaatttaggttacacacaaggaaaaaaaagcactatgacgagaatagcatctataaacacaccttgttaatttagtaattagctcctctgggtggttaatcagtgagtatcatgttgattgttgaggtaggagtgcaacagtgagtatcagtacttattag
More
|
||||||||||
| CDS seq | atggatgtcgtcaagaaggcggcggcggcggcggaagaggaggaggtccacggcgtggtcatcgtcggcggcggcctctgcggcctcgccaccgcgctcgccctccaccgcaaagggatggggagcctcgtggtggagaggtcggaggcgctgcgtgtcggcggcgtggcgctcaacgtccacgccaacgggtggcgcgccctcgaggagctcggcctcgccgacggcctccggaaaaccgccaacctcatcacctcggttcgcatggtgcggcagatccagggcaagaaccagaccaccgtctcatctcccaggaaggagatccgatgcttgagaaggaaggacgtgatggaggcactggccaagagcgtccccgcgcacacgatccgctacggctgccgcatcgtggccgtcgatgaagaccccggcaccgactgtaccctccctcgtttcatcgtcctcggcttcgcgagctacccagaggggcacccgtttgggaccgagttctcgcaaatcatagcggatgattttgccgtcggacgggtgcccattaacgaaaatctgttgcatttcttcgtaagcaggagtccctcaccaggacgtacggacgttgatgaggacgcggcgaggaagtacgtgctggagaaggtcgacgagctccccggcgaggtcgccgacatggtgcgtcggtgcgacgcggcgtcgagctggacgctgacgaaggtgtggtaccggccgccgtggcaggtggcgctcgccgggttccggcgcggcgcggtgacggtcgccggcgacgcgatgcacgccatggggcccttcatcggccagggcggctccgcggggctggaggacgccgtcgtgctcgcccgctcgctgtcgtcggcggcggccggcgatggccgggcgccgccgcgtcagcagctgcgcgacgacgccgtcggcgcggcgatagacgagtacgtcgcggagaggcggcggagggcgacgacgctgtgcctgcacagcttcgccatcgggacgttgctgacgacgaggtggctcgccgtgaagctcgcgagtgcaacagtgagtatcagtacttattag
More
|
||||||||||
| Protein seq | MDVVKKAAAAAEEEEVHGVVIVGGGLCGLATALALHRKGMGSLVVERSEALRVGGVALNVHANGWRALEELGLADGLRKTANLITSVRMVRQIQGKNQTTVSSPRKEIRCLRRKDVMEALAKSVPAHTIRYGCRIVAVDEDPGTDCTLPRFIVLGFASYPEGHPFGTEFSQIIADDFAVGRVPINENLLHFFVSRSPSPGRTDVDEDAARKYVLEKVDELPGEVADMVRRCDAASSWTLTKVWYRPPWQVALAGFRRGAVTVAGDAMHAMGPFIGQGGSAGLEDAVVLARSLSSAAAGDGRAPPRQQLRDDAVGAAIDEYVAERRRRATTLCLHSFAIGTLLTTRWLAVKLASATVSISTY |
||||||||||
| Function | Monooxygenase 1 [UniProtKB/Swiss-Prot:O81815] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0021480 | OsKeNa_02g0021480.01 | Chr02 | 21398338 | 21402025 | + | NAM | ||
| CDS seq | atggatgtcgtcaagaaggcggcggcggcggcggaagaggaggaggtccacggcgtggtcatcgtcggcggcggcctctgcggcctcgccaccgcgctcgccctccaccgcaaagggatggggagcctcgtggtggagaggtcggaggcgctgcgtgtcggcggcgtggcgctcaacgtccacgccaacgggtggcgcgccctcgaggagctcggcctcgccgacggcctccggaaaaccgccaacctcatcacctcggttcgcatggtgcggcagatccagggcaagaaccagaccaccgtctcatctcccaggaaggagatccgatgcttgagaaggaaggacgtgatggaggcactggccaagagcgtccccgcgcacacgatccgctacggctgccgcatcgtggccgtcgatgaagaccccggcaccgactgtaccctccctcgtttcatcgtcctcggcttcgcgagctacccagaggggcacccgtttgggaccgagttctcgcaaatcatagcggatgattttgccgtcggacgggtgcccattaacgaaaatctgttgcatttcttcgtaagcaggagtccctcaccaggacgtacggacgttgatgaggacgcggcgaggaagtacgtgctggagaaggtcgacgagctccccggcgaggtcgccgacatggtgcgtcggtgcgacgcggcgtcgagctggacgctgacgaaggtgtggtaccggccgccgtggcaggtggcgctcgccgggttccggcgcggcgcggtgacggtcgccggcgacgcgatgcacgccatggggcccttcatcggccagggcggctccgcggggctggaggacgccgtcgtgctcgcccgctcgctgtcgtcggcggcggccggcgatggccgggcgccgccgcgtcagcagctgcgcgacgacgccgtcggcgcggcgatagacgagtacgtcgcggagaggcggcggagggcgacgacgctgtgcctgcacagcttcgccatcgggacgttgctgacgacgaggtggctcgccgtgaagctcgcgagtgcaacagtgagtatcagtacttattag
More
|
|||||||
| Protein seq | MDVVKKAAAAAEEEEVHGVVIVGGGLCGLATALALHRKGMGSLVVERSEALRVGGVALNVHANGWRALEELGLADGLRKTANLITSVRMVRQIQGKNQTTVSSPRKEIRCLRRKDVMEALAKSVPAHTIRYGCRIVAVDEDPGTDCTLPRFIVLGFASYPEGHPFGTEFSQIIADDFAVGRVPINENLLHFFVSRSPSPGRTDVDEDAARKYVLEKVDELPGEVADMVRRCDAASSWTLTKVWYRPPWQVALAGFRRGAVTVAGDAMHAMGPFIGQGGSAGLEDAVVLARSLSSAAAGDGRAPPRQQLRDDAVGAAIDEYVAERRRRATTLCLHSFAIGTLLTTRWLAVKLASATVSISTY
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0021480 | OsKeNa_02g0021480.02 | Chr02 | 21398275 | 21401788 | + | IsoSeq | ||
| CDS seq | catgttccgtggctaactgacgaccaaaccactgccttactgtcttactcccttcctcgtcgatggatgtcgtcaagaaggcggcggcggcggcggaagaggaggaggtccacggcgtggtcatcgtcggcggcggcctctgcggcctcgccaccgcgctcgccctccaccgcaaagggatggggagcctcgtggtggagaggtcggaggcgctgcgtgtcggcggcgtggcgctcaacgtccacgccaacgggtggcgcgccctcgaggagctcggcctcgccgacggcctccggaaaaccgccaacctcatcacctcggttcgcatggtgcggcagatccagggcaagaaccagaccaccgtctcatctcccaggaaggagatccgat
More
|
|||||||
| Protein seq | HVPWLTDDQTTALLSYSLPRRWMSSRRRRRRRKRRRSTAWSSSAAASAASPPRSPSTAKGWGASWWRGRRRCVSAAWRSTSTPTGGAPSRSSASPTASGKPPTSSPRFAWCGRSRARTRPPSHLPGRRSD |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.456772 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0560300 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g35320 | RBH | 0.114326 | 0.0 | 0.323095 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0560300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0021400 | SBH | 0.0 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0014110 | SBH | 0.183268 | 0.735628 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0021480 | SBH | 0.000000 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0021200 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0021120 | RBH | 4.354653 | 0.0 | 6.495039 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0349000 | RBH | 1.5917955 | 0.53414 | 0.020543 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0020850 | RBH | 0.0 | 0.0 | 0.445853 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0375600 | RBH | 3.7197165 | 1.432395 | 0.726216 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0021320 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0021060 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0021520 | SBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0021210 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0021050 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G021480 | SBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0021250 | RBH | 0.0 | 0.0 | 6.097155 |
