Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_01g0036520 | OGI:01101660 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr01:34150930-34153148 | ||||||||
| Gene Symbol | GNS7, Gns7, OsGns7 | ||||||||||
| DNA seq | taattaatcagaaatgcagcggaatcatatacatatcgatgtcaaatatctttgtccaatattgtaatcatactactaacttcctaaaattggtacttaagtaactcatgcacacgatgagtccaaatccatggagcgtcgcccccgccgtcgctgcctgattaagatgatcacgccgagaagtcgacgtggtagaccgcgctcatgtccgggtggaacaggccgaagttctgctccacgccctcgggcttctggttctcgttgaacatggcgaagatgtacgtctccacggccttcccgggccgccgcggcgtgccgcgcccgacgtggcgcaccaggttgttgctgtacgccgccgcgttctccacgctggcgccggccccgccgccgcccgacggccacccggtctccgacaccaccacctccaggccctgcccgcccgccttctccagcgccgcgtacaccgcgtccaggatggcgtcgaacatgttggtgtacgtgacaccgccgtccgtcacggccgccgacgtcgacggcgacagcagcgcgtagtcgagccgcaccgacgacgggtcggcggagtaggcgaagtacgggtacacgttcaccagcaggggcgtcccgctcgacgccaggaaggagacgatcggcgccaccgtcggcagcgcggcctcggagaacgcgccctgcgacggcgggtacgaggagcccagcaccgacgtcgcgacgaccgtcgtgaccggcacgccgagccccgcggcgcgcagcgccgaatggaggttcctcatggccgggaggacgctcgccgcctcgtccccagggatgacctcgttgccggcgttgatgtagcggaagcggacggcgccggcgaagggctgcacgtacgactggacccacgacgccgcgaacgaggcgtcggtggcgaggcgtgccaggtcctcgttgagcgtgccgagcacgacgccgaggcccgagccgcggagcgcggcgagcacggtggtgtccgggtggaagaggcggatgtcggtgatgttgctggctctgtacagggcgatgaccttgtccggcgacgggaggttgttgccgatcatgccatagttcacaccgataccttccactcctgcacgatcaatacacacgccatacacgtactggtaagcaagcaaagaaactactcaacctagcttgtactactacattaccatttcatctttccacagattcactagttaattaacggcattttgatgaaagatttcttactaactatcgctgcaaaggtgcatatatgcgcatatgattacattacccttttcatgaaaggaacactcattttgatattggaaagggcaagctagaaacagttcttgtggatcaaaagttaccatccataattaaggagtgcattgtactacaaccaaacattaggtcccgtcggttctacttgaccatgagagatcgaccacacttcaaaagatttgaaacgaattgaagacggtggtttgaattgacagagaaacaaagatgccaagatatttccattgtatccccagtaaggccttgttcggttacgcgcggattcaatccggaccgggaatgaggagtatagtaacaaatttatgatagagtaatgagagactgggatttattccgagccgggaaccaatttactcataataggtataacaaaacatccggtaaagaaacaccacatctaaatatctctgcttgatccaacggtgcacccgtgaatgcatgcaaagatattccaaggataccgcttttagagaagattatggcagatcctaaccaataacacaatgaacaaaacagagagtaaccggataatgacaagaacaatttccaagaagcattcccactaagatcgatcgaaatcaaccgcgtttcagagaagttttcacgcatcgcaaatatactcgaaactgattaacggcgcagcaaggggagtactgataaacacaagagagaacaccaatctagtagctactactaacaaccaatctagctactactaactgatcaccagagaagtagatcaaccgatgcgttcactcacctgaaaccgagcagccgcagagcagcaacccgaagatggcggcggtaaccaacacagcatccatctcgccgatcttctgcagcgcgcggcagcagaggtagcagaaactatctgagaactgtatctcctttccgactcctct
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| CDS seq | atggatgctgtgttggttaccgccgccatcttcgggttgctgctctgcggctgctcggtttcaggagtggaaggtatcggtgtgaactatggcatgatcggcaacaacctcccgtcgccggacaaggtcatcgccctgtacagagccagcaacatcaccgacatccgcctcttccacccggacaccaccgtgctcgccgcgctccgcggctcgggcctcggcgtcgtgctcggcacgctcaacgaggacctggcacgcctcgccaccgacgcctcgttcgcggcgtcgtgggtccagtcgtacgtgcagcccttcgccggcgccgtccgcttccgctacatcaacgccggcaacgaggtcatccctggggacgaggcggcgagcgtcctcccggccatgaggaacctccattcggcgctgcgcgccgcggggctcggcgtgccggtcacgacggtcgtcgcgacgtcggtgctgggctcctcgtacccgccgtcgcagggcgcgttctccgaggccgcgctgccgacggtggcgccgatcgtctccttcctggcgtcgagcgggacgcccctgctggtgaacgtgtacccgtacttcgcctactccgccgacccgtcgtcggtgcggctcgactacgcgctgctgtcgccgtcgacgtcggcggccgtgacggacggcggtgtcacgtacaccaacatgttcgacgccatcctggacgcggtgtacgcggcgctggagaaggcgggcgggcagggcctggaggtggtggtgtcggagaccgggtggccgtcgggcggcggcggggccggcgccagcgtggagaacgcggcggcgtacagcaacaacctggtgcgccacgtcgggcgcggcacgccgcggcggcccgggaaggccgtggagacgtacatcttcgccatgttcaacgagaaccagaagcccgagggcgtggagcagaacttcggcctgttccacccggacatgagcgcggtctaccacgtcgacttctcggcgtga
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| Protein seq | MDAVLVTAAIFGLLLCGCSVSGVEGIGVNYGMIGNNLPSPDKVIALYRASNITDIRLFHPDTTVLAALRGSGLGVVLGTLNEDLARLATDASFAASWVQSYVQPFAGAVRFRYINAGNEVIPGDEAASVLPAMRNLHSALRAAGLGVPVTTVVATSVLGSSYPPSQGAFSEAALPTVAPIVSFLASSGTPLLVNVYPYFAYSADPSSVRLDYALLSPSTSAAVTDGGVTYTNMFDAILDAVYAALEKAGGQGLEVVVSETGWPSGGGGAGASVENAAAYSNNLVRHVGRGTPRRPGKAVETYIFAMFNENQKPEGVEQNFGLFHPDMSAVYHVDFSA |
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| Function | Putative glucan endo-1,3-beta-glucosidase GVI (Fragment) [UniProtKB/Swiss-Prot:Q02439] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_01g0036520 | OsKeNa_01g0036520.01 | Chr01 | 34150930 | 34153148 | - | NAM | ||
| CDS seq | atggatgctgtgttggttaccgccgccatcttcgggttgctgctctgcggctgctcggtttcaggagtggaaggtatcggtgtgaactatggcatgatcggcaacaacctcccgtcgccggacaaggtcatcgccctgtacagagccagcaacatcaccgacatccgcctcttccacccggacaccaccgtgctcgccgcgctccgcggctcgggcctcggcgtcgtgctcggcacgctcaacgaggacctggcacgcctcgccaccgacgcctcgttcgcggcgtcgtgggtccagtcgtacgtgcagcccttcgccggcgccgtccgcttccgctacatcaacgccggcaacgaggtcatccctggggacgaggcggcgagcgtcctcccggccatgaggaacctccattcggcgctgcgcgccgcggggctcggcgtgccggtcacgacggtcgtcgcgacgtcggtgctgggctcctcgtacccgccgtcgcagggcgcgttctccgaggccgcgctgccgacggtggcgccgatcgtctccttcctggcgtcgagcgggacgcccctgctggtgaacgtgtacccgtacttcgcctactccgccgacccgtcgtcggtgcggctcgactacgcgctgctgtcgccgtcgacgtcggcggccgtgacggacggcggtgtcacgtacaccaacatgttcgacgccatcctggacgcggtgtacgcggcgctggagaaggcgggcgggcagggcctggaggtggtggtgtcggagaccgggtggccgtcgggcggcggcggggccggcgccagcgtggagaacgcggcggcgtacagcaacaacctggtgcgccacgtcgggcgcggcacgccgcggcggcccgggaaggccgtggagacgtacatcttcgccatgttcaacgagaaccagaagcccgagggcgtggagcagaacttcggcctgttccacccggacatgagcgcggtctaccacgtcgacttctcggcgtga
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| Protein seq | MDAVLVTAAIFGLLLCGCSVSGVEGIGVNYGMIGNNLPSPDKVIALYRASNITDIRLFHPDTTVLAALRGSGLGVVLGTLNEDLARLATDASFAASWVQSYVQPFAGAVRFRYINAGNEVIPGDEAASVLPAMRNLHSALRAAGLGVPVTTVVATSVLGSSYPPSQGAFSEAALPTVAPIVSFLASSGTPLLVNVYPYFAYSADPSSVRLDYALLSPSTSAAVTDGGVTYTNMFDAILDAVYAALEKAGGQGLEVVVSETGWPSGGGGAGASVENAAAYSNNLVRHVGRGTPRRPGKAVETYIFAMFNENQKPEGVEQNFGLFHPDMSAVYHVDFSA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.437807 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0801500 | RBH | 0.0 | 0.0 | 0.463289 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g58730 | RBH | 0.0 | 0.0 | 0.119260 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0801500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0037040 | RBH | 0.0 | 0.0 | 1.485301 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0022130 | RBH | 0.409114 | 0.746489 | 1.163418 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0036920 | RBH | 0.0 | 0.0 | 3.140902 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0036320 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0035930 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0559800 | RBH | 0.480338 | 0.307633 | 0.1043245 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0035670 | RBH | 0.0 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0558200 | RBH | 0.258519 | 0.0149345 | 0.100323 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0035790 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0035860 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0036090 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0036170 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0035950 | RBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G036450 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0036170 | RBH | 0.0 | 0.0 | 0.810822 |
