Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_01g0032460 | OGI:01093020 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr01:30988708-30992946 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | aaggcaggagaggggaagggggatgagcagctcggcgtggtgaggtgagccgagaggtggggcggtggctgctgcattgcattgggcgggagagatcgatcgatcgctcgccggcgctggggctgggatctcgcggcgctcgagggcgctgaggaggagctctgtggctgctgcggcttcttggtcaggcgccggcgttgtgcccattgggctggggtcaagctcgccgtgatctggggatttggatctccgaggcgcgttgcccgttcgctgtcgggagccgccggggcgggtggtgggtggaaggctccattgcggcagttcggtgggcggctgctgattgggggcagccgggtgggagatctggccgtcggcggggagctgcagatcccctgcctactgcgcgtccacgcttcgctgccgtggagattcttgaggaggttggtggtggggatggggatggtcggagcctacgcggatcccttcctgcctccgaagatggccttgtcggcgtacgccgcgccgatgggggagtatggccagccgcagccgcagccggcgccgcgcccgccggcctgcccgtactcgtcttcctcctcctcgccgccgccggtctccgcgtcgtaccattcttggcctccggcgacgtcagcttcgccggtgagtagcccacctccggtctcctctccgccagagtcgtttccgtcatcgccgccgccggcattgtcgccgccgccgccggacgctcctcccccatcgctcccgccgtctccgccgccgtccccacccccgtcgccgccccatgtggaggtgcaagcgccgccgccgccgatgacaactgaccagccgcacgtccagccccgcgtgtacccatcacccccgccgccgtctctccccccacctccgcctcagaccttctcgccgccatcgccacctccatttcacccaccgtcgtcgtcgcccgctccagctccagtgcctgctgctgtagtctatccgcctcctcccccaccaagaatcgcctctccaccgccgccgcgtaatcacatcaagccacattacgtgccgcggtcatctgcgaggtcgcattcgaattcgacccgcgcatcaagtggcgccggcaagaacatcgagatatcgagggaggcagccaccacaattgtagcacttgccgggcttgccatgctcagctttgtcggcgctacaatttggttcgtcaagaagaagcgccggcggatagagcctcctgcatcactgccgacgcagcagccagctccgccgccaccgccaaactactttccctcttccggtggatcctcgctaacgtcaggtacaaaacttgagcatcgaagtgttttagtgtacaactatatgtgtggatcctaattttatccatcgaacttgatgccaattgtttgtactgtcagatgcatttttcatatcacctggatatcatccggtcaggttgttcagtgcggggagccatgggtatccatattcaccagctgattctgccattgggtactctaggatgctattcaccccagaaaatttggcagaattcacaaatggctttgcagagcaaaaccttttgggagaaggtggatttgggtgtgtttacaagggcatcttgccagacaatcgccttgtggctgtcaagaagctcaaaattgggaatgggcaaggagaacgtgagttcaaggccgaagttgatactatcagcagagtacatcatagacatttggtttcactagtaggctactgcatagcagatggccagcggatgcttgtttatgattttgttccaaacaatacgctttattaccatctccatggtaagaatcttttatcagttctagtagccttgattttttttaaatttatttctagcttcactgaggctgagttttcttaactgatcactaaacatgcccatgaaattgcagtaagtgaagcggcagttcttgattggcgaacaagggttaagatttcggccggagcagcccgtggaattgcttatctgcatgaagactgtaatactactttcctttgttaaactaatccatttccctcaaataggattgttttcttagtattgccctgctttgttcatcaggtcatcctcggattatacatagagatattaaatcatccaatattttattggatgacaacttcgaagctcaggtatgctattacttggtgtatgacctccatcgccagacactttaatgtgattctatattctttttttttcttctaatttcccctctccaacaatgccaggtttctgattttggacttgcaaggctagcagctgactccaatacgcatgtcacgacacgtgtcatgggtacatttgggtatgtgaacttgcgagtatagcgaaagtctcgcagttctccggaattttatggctaatatctgatctaaaaatataattttgattaacaaatgtagtatgccctctgcaggtatttggctccagagtatgcgttgtctggcaagttgactgcaaaatctgatgtatattcttttggagtcgttcttttggagcttattacaggaagaaaacctgttgatgcttcccagccactgggagatgagagccttgttgagtgggtgagtttaaaaaaatattctgaacattctatttgactcagttaggtcctagttatgcatatattcagatttttagcatgtgtttgtttgattgagattttctaaaaatgacaggattgagtgttccacctgcattaattttaatgagattaaaatgtaatatataaacaagacattccctataggtctatataatctgcttaatgatttggttgctgattttctgttccacagtgctgatcactatacctgttgaggtgaaatacccagatttgtaggttctggtatatgcaacttcgtaagccctggtggcatgtaattagtttgccttttctcttaaaaaccaatcaacctttcaattcttttatttacaatgttgccaatatacttctagcagctgtaatctgttagtcctttcgttggccccactttcgtaatatgttgtctgaggaaatgatatggagagagccaagttagctaaaagttccaggggttggagcttttacaaaagtaggcagcctgattattcttccagagtggcacacaaaaagcagagacttatttaatgcagtgttacaaccataagctgtgatgagtcatgaaagaagctagagaacttcggcaaggacttgagcgatttgaaggacagagagaaagacaccaattatcatgtacctatttagatagttgcatagcaatcataaaggaattgatgcagtgcacaagtgacacctaagtataggacattccttctggttattatctggtctgaagggtttcatgatagctttttgcgttgtataatgtgaacataaaatatgctggtccatctaatatgaacaataacacaaatagtaatgtcattaccgtacccgtgtgaacctatatggacttctaattttcatcatgagtttgaagcatttggactgggattaatttaccagtgttgtgatcttaaagcaaacctaattcatgttgaaaattttcaggctcggccccttctcctcaaggcaattgaacatcgagaatttggtgacctccctgatccaaggatggaaaacaggtttgatgaaaatgagatgtatcatatgataggagctgcagctgcatgcattcgtcattctgcagcaatgagaccgcggatggggcaggtaatgaacacacccaaattcatttatgaactaatgacacccaaagaccaaaatgtgatgtttcctttgcatctctcaggtggttagagcactagatagtttagcagactctaacttgaacaatggccttcaacctggccgcagtgaagtattcttagaaccacagtccgaagaaattagattgttccagctgagagaattcggcagccgagattgtagtgacgagatgagccaagctagctggagaagccgaagagatttgtaaacatgttcagcacaagatcattaacaattttttggccattctttacatgtaattatctcttttacatgatttttttcccctctgaggcaattcatgtttctccatggaataaaattttgcattctttgaggagataagtaaatcattccttcccttttcagtgaagagtatacagatgtttgattcttggcattcgccgat
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| CDS seq | atggggatggtcggagcctacgcggatcccttcctgcctccgaagatggccttgtcggcgtacgccgcgccgatgggggagtatggccagccgcagccgcagccggcgccgcgcccgccggcctgcccgtactcgtcttcctcctcctcgccgccgccggtctccgcgtcgtaccattcttggcctccggcgacgtcagcttcgccggtgagtagcccacctccggtctcctctccgccagagtcgtttccgtcatcgccgccgccggcattgtcgccgccgccgccggacgctcctcccccatcgctcccgccgtctccgccgccgtccccacccccgtcgccgccccatgtggaggtgcaagcgccgccgccgccgatgacaactgaccagccgcacgtccagccccgcgtgtacccatcacccccgccgccgtctctccccccacctccgcctcagaccttctcgccgccatcgccacctccatttcacccaccgtcgtcgtcgcccgctccagctccagtgcctgctgctgtagtctatccgcctcctcccccaccaagaatcgcctctccaccgccgccgcgtaatcacatcaagccacattacgtgccgcggtcatctgcgaggtcgcattcgaattcgacccgcgcatcaagtggcgccggcaagaacatcgagatatcgagggaggcagccaccacaattgtagcacttgccgggcttgccatgctcagctttgtcggcgctacaatttggttcgtcaagaagaagcgccggcggatagagcctcctgcatcactgccgacgcagcagccagctccgccgccaccgccaaactactttccctcttccggtggatcctcgctaacgtcagatgcatttttcatatcacctggatatcatccggtcaggttgttcagtgcggggagccatgggtatccatattcaccagctgattctgccattgggtactctaggatgctattcaccccagaaaatttggcagaattcacaaatggctttgcagagcaaaaccttttgggagaaggtggatttgggtgtgtttacaagggcatcttgccagacaatcgccttgtggctgtcaagaagctcaaaattgggaatgggcaaggagaacgtgagttcaaggccgaagttgatactatcagcagagtacatcatagacatttggtttcactagtaggctactgcatagcagatggccagcggatgcttgtttatgattttgttccaaacaatacgctttattaccatctccatgtaagtgaagcggcagttcttgattggcgaacaagggttaagatttcggccggagcagcccgtggaattgcttatctgcatgaagactgtcatcctcggattatacatagagatattaaatcatccaatattttattggatgacaacttcgaagctcaggtttctgattttggacttgcaaggctagcagctgactccaatacgcatgtcacgacacgtgtcatgggtacatttgggtatttggctccagagtatgcgttgtctggcaagttgactgcaaaatctgatgtatattcttttggagtcgttcttttggagcttattacaggaagaaaacctgttgatgcttcccagccactgggagatgagagccttgttgagtgggctcggccccttctcctcaaggcaattgaacatcgagaatttggtgacctccctgatccaaggatggaaaacaggtttgatgaaaatgagatgtatcatatgataggagctgcagctgcatgcattcgtcattctgcagcaatgagaccgcggatggggcaggtggttagagcactagatagtttagcagactctaacttgaacaatggccttcaacctggccgcagtgaagtattcttagaaccacagtccgaagaaattagattgttccagctgagagaattcggcagccgagattgtagtgacgagatgagccaagctagctggagaagccgaagagatttgtaa
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| Protein seq | MGMVGAYADPFLPPKMALSAYAAPMGEYGQPQPQPAPRPPACPYSSSSSSPPPVSASYHSWPPATSASPVSSPPPVSSPPESFPSSPPPALSPPPPDAPPPSLPPSPPPSPPPSPPHVEVQAPPPPMTTDQPHVQPRVYPSPPPPSLPPPPPQTFSPPSPPPFHPPSSSPAPAPVPAAVVYPPPPPPRIASPPPPRNHIKPHYVPRSSARSHSNSTRASSGAGKNIEISREAATTIVALAGLAMLSFVGATIWFVKKKRRRIEPPASLPTQQPAPPPPPNYFPSSGGSSLTSDAFFISPGYHPVRLFSAGSHGYPYSPADSAIGYSRMLFTPENLAEFTNGFAEQNLLGEGGFGCVYKGILPDNRLVAVKKLKIGNGQGEREFKAEVDTISRVHHRHLVSLVGYCIADGQRMLVYDFVPNNTLYYHLHVSEAAVLDWRTRVKISAGAARGIAYLHEDCHPRIIHRDIKSSNILLDDNFEAQVSDFGLARLAADSNTHVTTRVMGTFGYLAPEYALSGKLTAKSDVYSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLLKAIEHREFGDLPDPRMENRFDENEMYHMIGAAAACIRHSAAMRPRMGQVVRALDSLADSNLNNGLQPGRSEVFLEPQSEEIRLFQLREFGSRDCSDEMSQASWRSRRDL |
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| Function | Proline-rich receptor-like protein kinase PERK9 [UniProtKB/Swiss-Prot:Q9SX31] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_01g0032460 | OsKeNa_01g0032460.01 | Chr01 | 30988708 | 30992946 | + | NAM | ||
| CDS seq | atggggatggtcggagcctacgcggatcccttcctgcctccgaagatggccttgtcggcgtacgccgcgccgatgggggagtatggccagccgcagccgcagccggcgccgcgcccgccggcctgcccgtactcgtcttcctcctcctcgccgccgccggtctccgcgtcgtaccattcttggcctccggcgacgtcagcttcgccggtgagtagcccacctccggtctcctctccgccagagtcgtttccgtcatcgccgccgccggcattgtcgccgccgccgccggacgctcctcccccatcgctcccgccgtctccgccgccgtccccacccccgtcgccgccccatgtggaggtgcaagcgccgccgccgccgatgacaactgaccagccgcacgtccagccccgcgtgtacccatcacccccgccgccgtctctccccccacctccgcctcagaccttctcgccgccatcgccacctccatttcacccaccgtcgtcgtcgcccgctccagctccagtgcctgctgctgtagtctatccgcctcctcccccaccaagaatcgcctctccaccgccgccgcgtaatcacatcaagccacattacgtgccgcggtcatctgcgaggtcgcattcgaattcgacccgcgcatcaagtggcgccggcaagaacatcgagatatcgagggaggcagccaccacaattgtagcacttgccgggcttgccatgctcagctttgtcggcgctacaatttggttcgtcaagaagaagcgccggcggatagagcctcctgcatcactgccgacgcagcagccagctccgccgccaccgccaaactactttccctcttccggtggatcctcgctaacgtcagatgcatttttcatatcacctggatatcatccggtcaggttgttcagtgcggggagccatgggtatccatattcaccagctgattctgccattgggtactctaggatgctattcaccccagaaaatttggcagaattcacaaatggctttgcagagcaaaaccttttgggagaaggtggatttgggtgtgtttacaagggcatcttgccagacaatcgccttgtggctgtcaagaagctcaaaattgggaatgggcaaggagaacgtgagttcaaggccgaagttgatactatcagcagagtacatcatagacatttggtttcactagtaggctactgcatagcagatggccagcggatgcttgtttatgattttgttccaaacaatacgctttattaccatctccatgtaagtgaagcggcagttcttgattggcgaacaagggttaagatttcggccggagcagcccgtggaattgcttatctgcatgaagactgtcatcctcggattatacatagagatattaaatcatccaatattttattggatgacaacttcgaagctcaggtttctgattttggacttgcaaggctagcagctgactccaatacgcatgtcacgacacgtgtcatgggtacatttgggtatttggctccagagtatgcgttgtctggcaagttgactgcaaaatctgatgtatattcttttggagtcgttcttttggagcttattacaggaagaaaacctgttgatgcttcccagccactgggagatgagagccttgttgagtgggctcggccccttctcctcaaggcaattgaacatcgagaatttggtgacctccctgatccaaggatggaaaacaggtttgatgaaaatgagatgtatcatatgataggagctgcagctgcatgcattcgtcattctgcagcaatgagaccgcggatggggcaggtggttagagcactagatagtttagcagactctaacttgaacaatggccttcaacctggccgcagtgaagtattcttagaaccacagtccgaagaaattagattgttccagctgagagaattcggcagccgagattgtagtgacgagatgagccaagctagctggagaagccgaagagatttgtaa
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| Protein seq | MGMVGAYADPFLPPKMALSAYAAPMGEYGQPQPQPAPRPPACPYSSSSSSPPPVSASYHSWPPATSASPVSSPPPVSSPPESFPSSPPPALSPPPPDAPPPSLPPSPPPSPPPSPPHVEVQAPPPPMTTDQPHVQPRVYPSPPPPSLPPPPPQTFSPPSPPPFHPPSSSPAPAPVPAAVVYPPPPPPRIASPPPPRNHIKPHYVPRSSARSHSNSTRASSGAGKNIEISREAATTIVALAGLAMLSFVGATIWFVKKKRRRIEPPASLPTQQPAPPPPPNYFPSSGGSSLTSDAFFISPGYHPVRLFSAGSHGYPYSPADSAIGYSRMLFTPENLAEFTNGFAEQNLLGEGGFGCVYKGILPDNRLVAVKKLKIGNGQGEREFKAEVDTISRVHHRHLVSLVGYCIADGQRMLVYDFVPNNTLYYHLHVSEAAVLDWRTRVKISAGAARGIAYLHEDCHPRIIHRDIKSSNILLDDNFEAQVSDFGLARLAADSNTHVTTRVMGTFGYLAPEYALSGKLTAKSDVYSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLLKAIEHREFGDLPDPRMENRFDENEMYHMIGAAAACIRHSAAMRPRMGQVVRALDSLADSNLNNGLQPGRSEVFLEPQSEEIRLFQLREFGSRDCSDEMSQASWRSRRDL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 2.409974 | 0.683617 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0738300 | RBH | 0.000000 | 0.0 | 2.812004 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g53640 | RBH | 0.000000 | 0.0 | 0.705616 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0738300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0032960 | RBH | 0.0 | 0.846135 | 3.705718 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0023520 | SBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0032880 | RBH | 0.0 | 8.153732 | 2.855016 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0032170 | RBH | 0.0 | 0.366733 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0031860 | RBH | 0.0 | 8.104394 | 1.803872 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0511600 | RBH | 2.676245 | 3.449426 | 6.059317 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0031560 | RBH | 0.0 | 0.474209 | 0.321209 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0505400 | RBH | 3.449578 | 0.258943 | 19.8090255 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0031800 | RBH | 0.0 | 0.227224 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0031850 | RBH | 0.0 | 8.044544 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0032030 | RBH | 0.0 | 12.814388 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0032180 | RBH | 0.0 | 0.486016 | 0.513496 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0031970 | RBH | 0.0 | 2.911810 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G032430 | RBH | 0.0 | 5.338775 | 1.336656 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0032080 | RBH | 0.0 | 7.636705 | 1.101636 |
