Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_01g0030140 | OGI:01087810 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr01:29239851-29241415 | ||||||||
| Gene Symbol | OsMYB14, MYB14, JAdMYB1 | ||||||||||
| DNA seq | ggccaagcaattagtgagaaccttgattgttccttcttcaggagaggaatacacgttacacagtcctcccagtggcagcaacttacagagtacaagtgtaagaaacttaattattcttacaaaatctcatagtagtaattaactacacagtgttcacatttctataccctttatttatatttttacccatgcagaaatcataaaaaggtgttaattaaggagtatggactagtgaaaattaacagagtacagtctctactctcccggttggtcatgccctctgtgtaaaatgccttggaagaatattgtatatacgataatggcttaattcacaagaacctcatcggaagtactcgaagttgaagtcgccgaccaccatgctccggctgacgtcgaagtcgaaatgtgtcatgccctgctcttgctgcccatggcagggcagcccgaacttgtgctccatggcgtccccctcgccgtagcccacgaaaggctcgaccttgctctcggtggcccaatgcagcggctcgctctcgagcgcattgttcacctccggcgcgcccacgccgcagttccagttgctgctgttgctggagctctcgccgtagcccaggttctccgacacgtcaagcacgctgctgtagtccacgaacccggccgcgtccttgccgccgaggtggccgtacaatggcatgcccgtggcgtcgaacccgctgccgaagctgtcgatcaccgggaacgggtcgaacacctgctgctgctgcttcagggcgaagccgtcggcggtggccggcggcttctggtcctgcgtcgacgtgtccaatgccgccgccgcagcagcagcagccgtggagatgggctggtgggtgctggggtcgatgccgcgctgcctcagcttcttcttgaggcagctgttccagaagttcttgatctcgttgtccgtcctccccggcaagtgcgacgcgatttgcgaccacctgcatcggattcgcctcgctgatcaggccacttatcgctaacaaatcacctccacacaaccacattgcgacgaaaatagtactggtacgcattattgccggagcggcagtacgtacgaacctgttgccgaggatctcatgcaggccgacgatggcgtcctcctcctgctgcgagaagctgccccgcttcaggtcggggcgcaggtagttgatccaccgcagcctgcagctcttgccgcacctctggagccctggagtacagaagaagatcgttgcacggcacgggtcagcgatgagacactgagacacatgcatgcaaagagcggatcgagcagagcaggagcagcttacgacctgcgagcttgggaacggagctccagcaaccgacgccgtagcggtagatgtgattgtagagcttctcgtcttcctcgggagaccagagccccttgcgcagcttctgctggacaccggcggcagagcacgcgtgccgtcccattcccgcccgacacgcgagcagctacctgccgctgggttcgttgcccttgccggcgtgtatctgtctatcgatctctctgtcgatcgaggcggccg
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| CDS seq | atgggacggcacgcgtgctctgccgccggtgtccagcagaagctgcgcaaggggctctggtctcccgaggaagacgagaagctctacaatcacatctaccgctacggcgtcggttgctggagctccgttcccaagctcgcaggtccgaggcgaatccgatgcaggtggtcgcaaatcgcgtcgcacttgccggggaggacggacaacgagatcaagaacttctggaacagctgcctcaagaagaagctgaggcagcgcggcatcgaccccagcacccaccagcccatctccacggctgctgctgctgcggcggcggcattggacacgtcgacgcaggaccagaagccgccggccaccgccgacggcttcgccctgaagcagcagcagcaggtgttcgacccgttcccggtgatcgacagcttcggcagcgggttcgacgccacgggcatgccattgtacggccacctcggcggcaaggacgcggccgggttcgtggactacagcagcgtgcttgacgtgtcggagaacctgggctacggcgagagctccagcaacagcagcaactggaactgcggcgtgggcgcgccggaggtgaacaatgcgctcgagagcgagccgctgcattgggccaccgagagcaaggtcgagcctttcgtgggctacggcgagggggacgccatggagcacaagttcgggctgccctgccatgggcagcaagagcagggcatgacacatttcgacttcgacgtcagccggagcatggtggtcggcgacttcaacttcgagtacttccgatga
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| Protein seq | MGRHACSAAGVQQKLRKGLWSPEEDEKLYNHIYRYGVGCWSSVPKLAGPRRIRCRWSQIASHLPGRTDNEIKNFWNSCLKKKLRQRGIDPSTHQPISTAAAAAAAALDTSTQDQKPPATADGFALKQQQQVFDPFPVIDSFGSGFDATGMPLYGHLGGKDAAGFVDYSSVLDVSENLGYGESSSNSSNWNCGVGAPEVNNALESEPLHWATESKVEPFVGYGEGDAMEHKFGLPCHGQQEQGMTHFDFDVSRSMVVGDFNFEYFR |
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| Function | Myb-related protein Hv33 [UniProtKB/Swiss-Prot:P20027] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_01g0030140 | OsKeNa_01g0030140.01 | Chr01 | 29239851 | 29241320 | - | NAM | ||
| CDS seq | atgggacggcacgcgtgctctgccgccggtgtccagcagaagctgcgcaaggggctctggtctcccgaggaagacgagaagctctacaatcacatctaccgctacggcgtcggttgctggagctccgttcccaagctcgcaggtccgaggcgaatccgatgcaggtggtcgcaaatcgcgtcgcacttgccggggaggacggacaacgagatcaagaacttctggaacagctgcctcaagaagaagctgaggcagcgcggcatcgaccccagcacccaccagcccatctccacggctgctgctgctgcggcggcggcattggacacgtcgacgcaggaccagaagccgccggccaccgccgacggcttcgccctgaagcagcagcagcaggtgttcgacccgttcccggtgatcgacagcttcggcagcgggttcgacgccacgggcatgccattgtacggccacctcggcggcaaggacgcggccgggttcgtggactacagcagcgtgcttgacgtgtcggagaacctgggctacggcgagagctccagcaacagcagcaactggaactgcggcgtgggcgcgccggaggtgaacaatgcgctcgagagcgagccgctgcattgggccaccgagagcaaggtcgagcctttcgtgggctacggcgagggggacgccatggagcacaagttcgggctgccctgccatgggcagcaagagcagggcatgacacatttcgacttcgacgtcagccggagcatggtggtcggcgacttcaacttcgagtacttccgatga
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| Protein seq | MGRHACSAAGVQQKLRKGLWSPEEDEKLYNHIYRYGVGCWSSVPKLAGPRRIRCRWSQIASHLPGRTDNEIKNFWNSCLKKKLRQRGIDPSTHQPISTAAAAAAAALDTSTQDQKPPATADGFALKQQQQVFDPFPVIDSFGSGFDATGMPLYGHLGGKDAAGFVDYSSVLDVSENLGYGESSSNSSNWNCGVGAPEVNNALESEPLHWATESKVEPFVGYGEGDAMEHKFGLPCHGQQEQGMTHFDFDVSRSMVVGDFNFEYFR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_01g0030140 | OsKeNa_01g0030140.02 | Chr01 | 29239853 | 29241415 | - | IsoSeq | ||
| CDS seq | cggccgcctcgatcgacagagagatcgatagacagatacacgccggcaagggcaacgaacccagcggcaggtagctgctcgcgtgtcgggcgggaatgggacggcacgcgtgctctgccgccggtgtccagcagaagctgcgcaaggggctctggtctcccgaggaagacgagaagctctacaatcacatctaccgctacggcgtcggttgctggagctccgttcccaagctcgcagggctccagaggtgcggcaagagctgcaggctgcggtggatcaactacctgcgccccg
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| Protein seq | RPPRSTERSIDRYTPARATNPAAGSCSRVGREWDGTRALPPVSSRSCARGSGLPRKTRSSTITSTATASVAGAPFPSSQGSRGAARAAGCGGSTTCAP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 0.476537 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0702700 | RBH | 0.0 | 0.0 | 1.044061 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g50720 | RBH | 0.0 | 0.0 | 0.260999 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0702700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0030540 | RBH | 0.0 | 0.000000 | 10.848306 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0025350 | RBH | 0.165335 | 7.620481 | 1.255314 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0030510 | RBH | 0.0 | 0.000000 | 10.958569 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0029790 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0029450 | RBH | 0.0 | 0.0 | 3.932283 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0482700 | RBH | 3.618405 | 4.1581965 | 1.0469305 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0029190 | RBH | 0.072585 | 0.120328 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0473300 | RBH | 3.373986 | 0.114095 | 2.0108275 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0029430 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0029380 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0029650 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0029790 | RBH | 0.0 | 0.000000 | 0.292289 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0029600 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G030040 | RBH | 0.137771 | 0.0 | 2.788394 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0029740 | RBH | 0.0 | 0.0 | 1.370328 |
