Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_01g0026680 | OGI:01072140 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr01:26312852-26323511 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctagtagggtgcccgtgcgttgctacggggaattttgttgatcacggaggataaaatctggcgttgaaaagacaaatatagcatcgtaaggaaactacattcaacataatttaattagtgttcagaacaactcgctgactaaaatttaaggagcaggcaacagtaatgctcaaactctttacctaagatgacttcatggttattaccaaatgcatgtacaacatgcaaaaaactttacaagtggtttgacaaactgaaatttgcaattaaataaaatagccagttgagcaaaacatattaatccctgacctaatctgaatccgaagctcctttcacatggagcaaattactgatcaaatgtgctccgttacaaatcagtactcacagttcctggctcctgcttacgtcctcacacaaaacttaacactcactgaagacctgcatattatatgaatattcatgtttcttgattctaaaaataaagacatcactgatttgactctcttgctagaaacatcaaatagtttggcagaagtgagcttagcatgagcagggaaaactcataccaaaataatgatagaaacaaaaattgtataatttttttctttgataaagatcaaagttttatttgatatagtaataggctaatagcatgagctcaaatgttggctttcagttcagatgatctccactcaagtgttattcagtaccccactggaaactggactgccacaacatgattacaagaaatgctaaactgcaattggaaatctgaactaaagcagaacctcataaatctgctaacatcagtactaagctgcaagacatgtacaaaccaactacgattgttttaaaaaagaagaagaaataactgtcagcttacaagtaaggacttcatcttgaatttgttcataacagtgaattgcttcatcctggacctggctgcttctctcctattagcaaagaataaaaaataatgagcaagggaagagctgccagggtggttcaccaaggactgatagaaaaatatctttacctgatcacctgcaactcctcggcgagcagccgactacaacggttttggtctctgagtcagccataacgaggaggcggccggagggactgctcggggaaggagtggatgtaggcatatacaggagaaggggcagaccaagaaagtaaatgtttactgctgtccaaggaaaaaaactcaagaaatgttagacttggaatataaaaattacagtaagaatggaatttaagcaagcatattgtggacggttaattagtcacataatataccttttctaatctgtgaggacctctctatacacaatattttttgtgtatgttgcagcttgtttagacaattcctttcctttcttctcattgtccttcacgccagtacgcttagactttttcttttgtttcttgtcttctaccggcatcgatagtatttttatgtttgttctagaggttgctcttgacagtgcaacgtatagttgaccatgggagaagacaggctctggtaagtagacgcctgcatttggaattgtttgaccctgcgccttattgatggtcaatgcaaagctcaatctaaccggaaattgcttcctcttgaagcgaaatgggaacatctcatcatcagaaggacatagaggtatccgaggaaggaaaactctctttccagcatgctgccctacaacaatctccgcgtcaatagcattttttccgaactgacgaaccaccagccttgtcccattgcaaagtccgttggctattggctgggtcaatgttcctcaaaagcatgatggggcagtttatcttcagcttaagcagatgcggaggtagcccatttggagttagagagttcaagaattttggcgggtaatagttatgagggtcatcctctgctcagtcaaaactatgatatgtcatcacatctcctctaaaccgctcaatcatcttcatgtttattcgatcgacgaactcattccgagtggacaatatggccctacatatgatgtagtttgggtccgtcaggttatcgtttaggttagggaacacggtatcgatgagcctttcgaggtccgtttcattccctttgcactctaagcaaatatccgaaggaaggcctatgtttccttccttgttcacctcctcggttccattcccaactcgaaggaggtagtccgcaaaccacgcgtcgctctgcgccctcatattgcgaacaagctttaattgaaccatacaatcccaaagataggacctgcgtagagtggcttctgttatctgagacctagtgcccttcctaatgaccgggagcacctgcctgaaatcccctccaaacacaatcgtcttccctccaaacggagaacgtggacaacccattatatctctcatgctcatatcgagggcctcaaccgcttgcctctttgtcatggaggcctcatcccatattataagcgatgccatctggagaagctttgccgtcccactttgtttggtgaagctgcaatacgacccttcctcaatgttgagtgggatcttgaaccgcgaatgtgcggtccggcctgctggcattatagaagctgcaacacccgacgtcgcggttgccacctctatatcaccattgccacgcactgtagctagtagcgccctatataggaaagtcttccccgtgcctcctgggccatctacgaagaacacgctcccctgagcactaccaaccgcgttcatgattttattgaatgcagacctttgctcatcattgagctggtctgggaggttcatatcatctctctccacaacaatggaagactcctcaataatctctctgggatctcctcgagtactatcatgtgattcatctatttcagggagcgggaacgatgagatttccttacccattgattgtagcatgccccggatatctatcatgccccggatatctatcagcaccatctgttggacagcataagggcatgcgttgttacatctgacatggaatctagatgcttgtcccaaagtgcacggacatcggtaggttcgcagtacaccaatatggtagcgaataacctgcgtagcgacgccggcatttggtagacaccggcctccgtaaggcactcgtcgagggtgttgtctgcctctataagaccccttctttcagctgcagcacggaacgacggcatgagcacaccatcaacagtacgtaggtcttcaaatgaggtggatcctgtcacatggtttagaagcacccgaagatagtagcgctccccctctgccgggtgggcacacacaattctcccgacctggccacctctatctcttttcttccagtacttacctggcgtctgccaagtaaaccacattgggaaatctctataaaggatatctcgagcctagacatgctgcctgttagcctcgaaatacgccgtaagcatcgatctgcctgcgtcttccttatccagaacatcacggagatccttgtctgcatcgaaagccaacatgtgcatgtttggcagatgcaattgcaactgcctcacagacggcgagatgtggcatatgtcaaaaccatatatacgccacaaggcttctggaggggtcacccacctcgcatccctgtagcgctgaatctcatcgatttcaccgtttttatctgcctcgtttatggatatcgaggccttgtcatgtcccttgtaaaggtatttaaagaggtactttactgccttgatgctcgagcaaatctcgacattcatgtgacagttgtacatccgtagaagataaggattgtacgggacaacccacctgttatcgagaggatgtcctctaaccaccttactcttactgtcattacgtctcctatacaacgggtatgaatccttgccttgcgaggttgtggtgttgaactctcgtaggtagttgttcctgcactttccatctcgcatgcattggcacctaccgttgagtcgaccacaagggccatgcatcatatgcttgacaaccatattgtatagctctggatattttttcttgtccggtagctcagctgagacgatgcggtcatattgctctgcagacgttagcttgtatcgaccactcatgatcagcaaaaagtgtgcgtgtggcagacccctcttctggaactcaacaacatatacgtgtgcaatgactttgccaaggatgtgcttctcgaacagctgcttctttaggtcctctaacttggctcgaaagacacggaccacgagatcaagacgatcttgtggtgtctggccaggctcaagttcacgagtaatctcatcctacttggggttgctagtcattgtaaggaatacatctggcttcccgtacttctatactaaagccatggcatccatgtatcgacgcttcatatttcggccaccacagacaaacaaagctggcaacacagttcttttgccaaccgcgcttgctcgactctccccagcctggatgctatccatcaacccttgatacaggtccgcccttatctccttctggttgttcctcacatagtctagacgggagctctcaaccttgatgtacatgtcaacggcaaactgctggaacaggagtccgccgtgaagtataggattgaaaatcccacgacgcatctggaatttatagcagtagtagtcccttacagagactcgtatcctgctgttacaatctacacgtgagaaacatctaggttagtacagtcatgtaacgcacaatgatcaattctctaaggcaacatagtacgaagataaacttaccaggatcatcgccattccgtgcgtttgcatcctccatggttattttgtcctttggaaggctttgatgccaaccattctctcctctagggaagaaaagagggtacgagaggggatcataacattcgtagaaaggctggatagatttccgcgtacggttgttcctgtatattgtcacgctaggctcgaacttccttctctcatttccctcaacccagatagcagcgacctcagttgtcaccggcacattgtaacgcctttggtgcaacctatgatccagatttagtgtcacgcgataattcgcgaggtcttcagcctgccctagacttctaaatgtctccgagtacgggttgttccgaaggacgtctgcaacagtcctaatcacatcctggtcaaggctaggggaacgttggaatctatgactcaatgttggatcgtcatcgtagaaatacaactcgagatgctctggaccagaatctctaggactgaaagaatgtatattatgatatatctgaccatgagcccgaaaagtgtacacgcccgaactcatgtttgcaaaggccttgtcaaggcttacaccaagggtagtgaatgagaagtggccgttgaagtatctattgttatcacggaaatgcttggcgtctggatccgagcttgtccaaagcctcatcagttcaggaggtgtttcattttgtacaagcttgatcttgccaccccgacaacagaagctcggcggttcgtactggaacctcttggcaccacagtgtttacagtcaggttcaggcttcagaacatttgtgctttgtggaatgttgctgtacatatagtcaaacggatcaggaacagaagaggtcggtgattgcgtgtcatcgtcatcagattgtaccatctcgtcatcctcatcgtcgcctggtatggtttagcgcaaaggatttatagtccgcaaaaattatacatgtgaaagagacattaagatatcacgacgacgatacctagcccagcaaacatgtagtattcatcgtcggagtcatcatccatgaaggaatccatatcatctttagtacaatgagatatgagaagttagtatgcggaagggtacaaattataggggaatttaactaattgccacttttaggtttggcagttatccaaattcccttgttacgtttcttaactaattggcacttttgccctggattgccacatggccaacagtgacaaatagttaagaagccaccatctaagaggggcaaaaaattaagagcaaacttaagaagggcatttggatagttgccaaatctaaaagtggaatatagttaaattcccccaaattgcgagtacgaatgaaaacatatatagatgataccatcattgaatgtgcatgatcgcgcctgatgatctacagcatgctcagtttgcaggctcgatgtagatggcacatcaccggttgtttccaagcaaggcgttggatttagcaacaatgggatagatccctcagggcactctagtgcaatggattcagcgcatggtttgtcacgcctagctgcatagagtgcgttacgtcgtgccagatgagcagatctttccccaggagtaacattttgtcgtcttgatctacggcaagcattcatatcatggatttccacatctggcatagattgccttgcaaccctacgacgggcattcaactctagtctctgttcttttgttagtgattgacgttgtgttctccgttggtccaccttagcttgcttttgctccggtgtaagagttgcatacttctccctagctcgagctagctttgactgcaatcgttcttttgtctcattggttggcgcacgcaccaattcattatctagtgatgtgccaacatcatcatgagtagatttatgggattgtttgctcacttcaaatattaaattgtacaaacatgaatagataataataactaacttagcgcacttctcatatgtaagcaaagaggttttatgtttgacaagtttatataaaaaaaacatgtgatgaagtaaaatgtgttacctagagagatgtcgtcatcgtggtcgcactcattttgatcgctgccttcaaaaaaactggattcatattgattttcacatcctgttgtaacatagtcagtaatatatattgtaatatagaaatttataaatggcaacagcattgtaatcccattaataaaaagatattagcatacctgaattatcaactacaaagtcagaagtattcatgtttaggtactttgagtgaagcgactcattggtacttcgttgggaccatagtgagctacattgttgatgattgtaaatgggagacgtcttggtgtgatattaagatgggaagcttcactttctattaaaacatagaactatcaatttccattcagtcgaataatatattgttcaaccaaactgtacaaacaataaagacattacttccttgatgcagcggggaagaatcagtcacttccaattggcacttcattatatcaacagcgcttatatttgaaatatcgccaagtggggctgttcacacgacgagaatttataatattgtttcgcataattggccagacatattttaatttgtacagataaatattacagttgtacctgaaacttgagtttcctccttctttcttttccttctttcacgtgccttcttgttcctatcatctttttgctctggggtcaatgctgcgtaccggtctctagcacgctttctttttagttcagccacactaaggtgactaacatcttcatgcaaacctgtacacatatgcacattgctgggtgtattgaaggacgcatcgcggttttccgcacatggatgactattaggcgtcaccacaggatgcacaacttcatggccagcatcacaagtttatactcatcacattggtgttggtggatacagattgagattgaattaaaataggaaacaagcaatatgtaaaagataccatttgaagcagttggagtgttatttgtaaagacatcacaattctcgtcgtatctttcaacggcacgtaacgacttgtttccaaccttgccccgtcaatttgccaaaccggaaccacttatattggttatgtcagcaagagggcctaagaaaggaacacatgggtgaaattagcatgcaaagagtttacattcgagttaataacatgcacatagctaacctgattttgtagttgatgttgtggagcccccaacaatcttatccatttctgaaaaacaaaacacatcagaccgcctaaatgcagtaatcacacttcattgagtctggatgttttcatcagtaacttcacaactcagacacagacatgtaaaaccagtaacttcacaactcagatatatatcgttggagagtgtaatattcctagagtgatggcagtgaaaagtaataggagatatttactgaatccaatataaaacatgtgtggcagtaacagacatatatttggtgcatatgttaaaaaataaattaatcagagacatgacatcccacaagaagcatcagtttataaactgtaaaaccaggttatatactacctgaaattaaagcaacaaaattggattttctcggggaaagtgaacattaggggttaaaatttacctagaaaggatatatatagagaggtgcagcactaaaaacaccaggatggctgtagcctacaagaagataaattagacatagaatgagaaaacagagaatgaaacagcagtgagctagcctagacagtgctgattcttcttaattgatctcacactgcaccccgagagaagaatatggcgatctggggggagggggaaccttgcaattaacgaaggaatgggaaggggagggagagatgtttacctggctagcggcgtgggggcgaggaggcgcgaaggggaccagacgacgagtaatcgacgacgacttgttggaaacccaatgtaagaaattcaatcaaatgctgaaaaattaaatgataaattataaatcagagaaacccagtgtaagatgaagcttcattctgaaatgcaataaaaagggattgccttcatgataagcaaaatgtatataacagtatctgaccaaccggtacgtcctatcactaaacataaaccaaatgtaccttatcctatcctatccaacagccaccaaaatttcaatcccctaaaatattcacccatatagatgtggggaagatgaggccaccggcgtgaaggatcgactcacaaaccaaatgaaacttatcctatcctatccaacaatcacccaaaattcaatcccctaaatattcacccatacagatgtggggaagatgaggccaccggcgtgaaggattgactcacaggcggatgagggtgcaaagaagagcctccaagtaatgcataatgcataataatatggtatataatgcatatatccatgacacacaaaataattcacaatggcgttgatatcaatatttattacatatatttacactgtttctcatcgagattgatacttcttaattgtaatttgtgagaatgttgtaccataggatatcaaacatctagtatttgcccccatttaatatttgctttctctaatctgatagcccAaaaaaaaaactgccaggatcccacataataacacatttactcctcttcgatgcatgtggccagatccttatattggttcaaaattactttcaggataacagagggaaattatcagtgttttttcaccatccatgtgtgtactgacgttgtgactctcagagcaaacctcttgctattgtgtgttatgcatcaccacgcaatgcagactgaactggagttcttttttttgttttgagaaattcatcgacactgacgtatacttaaaattctcgtgccatttgcaaagcggaaatttcaaaccaggaaaagaagactaatttaaatgagacacacacacctgaaacactgatctgatgttgaggaggccggaagctggcagcaatattctgaagttaaattcaactgcaatataggaacgtcagcacatctactgtcagaaaattagatgagtcaatctgtaattgttgtcatacagatttagtttattagcatctaataagtattggatgtgactcaacagaaaagtgattacatcggatgcaaaagctgaagagcaatttgaagtgtcattagtcattacctgttattagatacaaatcatgagtttagggatcccaacagcgttgtccattgctgtaggccaaggcgtggagatcaataaccacctgcacacatacagtagcatatagtttaaaagaatacggatcgattgctagattccacagcctcagccgtgccgtgggaccgagaaaggatcagtggcagtgagaagcagtcaccgcgtaaggcgtcggcggcgtcctggcgacgggtaccctgacaaaacatgccgttgccagctgtcgaactccaaattaggtgcttacaatttacaagatcaaaactgattgctctatcggaactatggacagcacaaaataatccgtcagtggttgttaaaatgcattttactgggttaaagaagccgatgctggatgagcagggtgtgattcactatatcattggggattttgacactggattctaaagtttttccatgaacagagtggcagattgtttctgcggcattcaatcgaacacctcatgtgcatgggcaaaatagctttactcgttcatcgcaatcaaaatcaattgggtagtataagtcaaaatagtttgctcatcacaatcaaaatcaaatcggaagggagaagagattgaaagacaacaaaagagaaaacttgccgtacagctctactggcctcaaaccacctctccgctcggtctcggcat
More
|
||||||||||
| CDS seq | atgccgagaccgagcggagaggtgctggcaacggcatgttttgtcagggtacccgtcgccaggacgccgccgacgccttacgcggtggttattgatctccacgccttggcctacagcaatggacaacgctttgaatttaacttcagaatattgctgccagcttccggcctcctcaacatcagatcagtgtttcagtcgtcgtcgattactcgtcgtctggtccccttcgcgcctcctcgcccccacgccgctagccaggctacagccatcctgaaatggataagattgttgggggctccacaacatcaactacaaaatcaggttggaaacaagtcgttacgtgccgttgaaagatacgacgagaattgtgatgtctttacaaataacactccaactgcttcaaatgttgtgcatcctgtggtgacgcctaatagtcatccatgtgcggaaaaccgcgatgcgtccttcaatacacccagcaatgtgcatatgtgtacaggtttgcatgaagatgttagtcaccttagtgtggctgaactaaaaagaaagcgtgctagagaccggtacgcagcattgaccccagagcaaaaagatgataggaacaagaaggcacgtgaaagaaggaaaagaaagaaggaggaaactcaagtttcagccccacttggcgatatttcaaatataagcgctgttgatataatgaagtgccaattggaagtgactgattcttccccgctgcatcaaggaaaaagtgaagcttcccatcttaatatcacaccaagacgtctcccatttacaatcatcaacaatgtagctcactatggtcccaacgaagtaccaatgagtcgcttcactcaaagatgtgaaaatcaatatgaatccagtttttttgaaggcagcgatcaaaatgagtgcgaccacgatgacgacatctctctagcagtaaacatttactttcttggtctgccccttctcctgtatatgcctacatccactccttccccgagcagtccctccggccgcctcctcgttatggctgactcagagaccaaaaccgttgtagtcggctgctcgccgaggagttgcaggagagaagcagccaggtccaggatgaagcaattcactgttatgaacaaattcaagatgaagtccttacttattttatcctccgtgatcaacaaaattccccgtagcaacgcacgggcaccctactag
More
|
||||||||||
| Protein seq | MPRPSGEVLATACFVRVPVARTPPTPYAVVIDLHALAYSNGQRFEFNFRILLPASGLLNIRSVFQSSSITRRLVPFAPPRPHAASQATAILKWIRLLGAPQHQLQNQVGNKSLRAVERYDENCDVFTNNTPTASNVVHPVVTPNSHPCAENRDASFNTPSNVHMCTGLHEDVSHLSVAELKRKRARDRYAALTPEQKDDRNKKARERRKRKKEETQVSAPLGDISNISAVDIMKCQLEVTDSSPLHQGKSEASHLNITPRRLPFTIINNVAHYGPNEVPMSRFTQRCENQYESSFFEGSDQNECDHDDDISLAVNIYFLGLPLLLYMPTSTPSPSSPSGRLLVMADSETKTVVVGCSPRSCRREAARSRMKQFTVMNKFKMKSLLILSSVINKIPRSNARAPY |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_01g0026680 | OsKeNa_01g0026680.01 | Chr01 | 26312852 | 26323511 | - | NAM | ||
| CDS seq | atgccgagaccgagcggagaggtgctggcaacggcatgttttgtcagggtacccgtcgccaggacgccgccgacgccttacgcggtggttattgatctccacgccttggcctacagcaatggacaacgctttgaatttaacttcagaatattgctgccagcttccggcctcctcaacatcagatcagtgtttcagtcgtcgtcgattactcgtcgtctggtccccttcgcgcctcctcgcccccacgccgctagccaggctacagccatcctgaaatggataagattgttgggggctccacaacatcaactacaaaatcaggttggaaacaagtcgttacgtgccgttgaaagatacgacgagaattgtgatgtctttacaaataacactccaactgcttcaaatgttgtgcatcctgtggtgacgcctaatagtcatccatgtgcggaaaaccgcgatgcgtccttcaatacacccagcaatgtgcatatgtgtacaggtttgcatgaagatgttagtcaccttagtgtggctgaactaaaaagaaagcgtgctagagaccggtacgcagcattgaccccagagcaaaaagatgataggaacaagaaggcacgtgaaagaaggaaaagaaagaaggaggaaactcaagtttcagccccacttggcgatatttcaaatataagcgctgttgatataatgaagtgccaattggaagtgactgattcttccccgctgcatcaaggaaaaagtgaagcttcccatcttaatatcacaccaagacgtctcccatttacaatcatcaacaatgtagctcactatggtcccaacgaagtaccaatgagtcgcttcactcaaagatgtgaaaatcaatatgaatccagtttttttgaaggcagcgatcaaaatgagtgcgaccacgatgacgacatctctctagcagtaaacatttactttcttggtctgccccttctcctgtatatgcctacatccactccttccccgagcagtccctccggccgcctcctcgttatggctgactcagagaccaaaaccgttgtagtcggctgctcgccgaggagttgcaggagagaagcagccaggtccaggatgaagcaattcactgttatgaacaaattcaagatgaagtccttacttattttatcctccgtgatcaacaaaattccccgtagcaacgcacgggcaccctactag
More
|
|||||||
| Protein seq | MPRPSGEVLATACFVRVPVARTPPTPYAVVIDLHALAYSNGQRFEFNFRILLPASGLLNIRSVFQSSSITRRLVPFAPPRPHAASQATAILKWIRLLGAPQHQLQNQVGNKSLRAVERYDENCDVFTNNTPTASNVVHPVVTPNSHPCAENRDASFNTPSNVHMCTGLHEDVSHLSVAELKRKRARDRYAALTPEQKDDRNKKARERRKRKKEETQVSAPLGDISNISAVDIMKCQLEVTDSSPLHQGKSEASHLNITPRRLPFTIINNVAHYGPNEVPMSRFTQRCENQYESSFFEGSDQNECDHDDDISLAVNIYFLGLPLLLYMPTSTPSPSSPSGRLLVMADSETKTVVVGCSPRSCRREAARSRMKQFTVMNKFKMKSLLILSSVINKIPRSNARAPY
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_01g0026680 | OsKeNa_01g0026680.02 | Chr01 | 26312931 | 26323511 | - | NAM | ||
| CDS seq | atgccgagaccgagcggagaggtgctggcaacggcatgttttgtcagggtacccgtcgccaggacgccgccgacgccttacgcggtggttattgatctccacgccttggcctacagcaatggacaacgctcttccggcctcctcaacatcagatcagtgtttcagtcgtcgtcgattactcgtcgtctggtccccttcgcgcctcctcgcccccacgccgctagccaggctacagccatcctgaaatggataagattgttgggggctccacaacatcaactacaaaatcaggttggaaacaagtcgttacgtgccgttgaaagatacgacgagaattgtgatgtctttacaaataacactccaactgcttcaaatgttgtgcatcctgtggtgacgcctaatagtcatccatgtgcggaaaaccgcgatgcgtccttcaatacacccagcaatgtgcatatgtgtacaggtttgcatgaagatgttagtcaccttagtgtggctgaactaaaaagaaagcgtgctagagaccggtacgcagcattgaccccagagcaaaaagatgataggaacaagaaggcacgtgaaagaaggaaaagaaagaaggaggaaactcaagtttcagccccacttggcgatatttcaaatataagcgctgttgatataatgaagtgccaattggaagtgactgattcttccccgctgcatcaaggaaaaagtgaagcttcccatcttaatatcacaccaagacgtctcccatttacaatcatcaacaatgtagctcactatggtcccaacgaagtaccaatgagtcgcttcactcaaagatgtgaaaatcaatatgaatccagtttttttgaaggcagcgatcaaaatgagtgcgaccacgatgacgacatctctctagcagtaaacatttactttcttggtctgccccttctcctgtatatgcctacatccactccttccccgagcagtccctccggccgcctcctcgttatggctgactcagagaccaaaaccgttgtagtcggctgctcgccgaggagttgcaggtga
More
|
|||||||
| Protein seq | MPRPSGEVLATACFVRVPVARTPPTPYAVVIDLHALAYSNGQRSSGLLNIRSVFQSSSITRRLVPFAPPRPHAASQATAILKWIRLLGAPQHQLQNQVGNKSLRAVERYDENCDVFTNNTPTASNVVHPVVTPNSHPCAENRDASFNTPSNVHMCTGLHEDVSHLSVAELKRKRARDRYAALTPEQKDDRNKKARERRKRKKEETQVSAPLGDISNISAVDIMKCQLEVTDSSPLHQGKSEASHLNITPRRLPFTIINNVAHYGPNEVPMSRFTQRCENQYESSFFEGSDQNECDHDDDISLAVNIYFLGLPLLLYMPTSTPSPSSPSGRLLVMADSETKTVVVGCSPRSCR
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_01g0026680 | OsKeNa_01g0026680.03 | Chr01 | 26313460 | 26314284 | - | IsoSeq | ||
| CDS seq | atgaggttctgctttagttcagatttccaattgcagtttagcatttcttgtaatcatgttgtggcagtccagtttccagtgggg |
|||||||
| Protein seq | MRFCFSSDFQLQFSISCNHVVAVQFPVG |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr01 | 26322611 | 26322859 | - | OsKeNa_01g0026680.01 | OsKeNa_01g0026680.02,OsKeNa_01g0026680.01 | All |
| A5 | Chr01 | 26313804 | 26313896 | - | OsKeNa_01g0026680.02,OsKeNa_01g0026680.03 | OsKeNa_01g0026680.03,OsKeNa_01g0026680.01,OsKeNa_01g0026680.02 | All |
| AL | Chr01 | 26312852 | 26313735 | - | OsKeNa_01g0026680.01 | OsKeNa_01g0026680.02,OsKeNa_01g0026680.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.171350 | 29.285984 | 4.593913 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g45880 | RBH | 1.468142 | 1.518606 | 1.011184 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0027170 | RBH | 0.204188 | 8.020040 | 5.682054 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0027110 | RBH | 2.227994 | 5.637622 | 8.491679 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0026370 | RBH | 0.124558 | 0.057994 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0026120 | RBH | 0.701633 | 43.666744 | 15.350679 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0437800 | RBH | 1.741449 | 14.873685 | 4.0367865 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0025780 | RBH | 0.265186 | 0.281583 | 1.735152 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0426900 | RBH | 2.316847 | 17.6722525 | 9.8329605 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0026050 | RBH | 0.022029 | 1.114413 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0025970 | RBH | 0.035331 | 13.966110 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0026300 | RBH | 4.632163 | 62.338764 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0026340 | RBH | 0.118016 | 2.226688 | 0.623705 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0026170 | RBH | 0.000000 | 6.025997 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G026530 | RBH | 0.102995 | 4.344651 | 1.983251 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0026300 | RBH | 0.318531 | 13.734037 | 4.438682 |
