Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_01g0008020 | OGI:01020220 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr01:6375592-6380524 | ||||||||
| Gene Symbol | GELP8, OsGELP8, GELP11, OsGELP11 | ||||||||||
| DNA seq | atagcgcaccggtgaaaactcttactaaaactccattaccggagatgcaaaaccatagcagtcctgcactgcggctgcagcttaagctagctagggttcttcctaagctatagctcactgaactcaaaccatggggaactactcaccctcaaaaccagttgccttcctcctcctcctcctcctcttcggttgcctgcattacgctcaggcgaaccccggccatcgtcgtcccaagatcgactccgtcttcagcttcggcaactcgttcgccgacaccggcaacttcgtcgagctggccgcgccgctgcttcccatcatgcctttcaacaacctcccctacggcgagaccttcttcggccaccccaccggccgtgctaccaatggccgcatcatcatggacttcatcggtacaacatacaaatgaacatacagtaatttcagtttgctttcagttctgattcaaatgaacatacagtaatttgctctatccaactttgcagctgacgagtttcatgtgccgttcgtaccaccgtttcttggccaaggtcgtcagaacttcacccatggcgctaacttcgccgtcgtcggtgccagcgctcttgatctcgccttcttcctcaagaacaacatcaccaacgtgcccccgttgaacatctccctgagcgtgcagctggagtggttccagaagctcaagccaaccttgtgccaaacagcccaaggtacgtatttttgttgtcttgatcactcgattcgatccattgctgaccggatttaattaatctgaactttttccttgctcgttcttacacagaatgcagagagtacttcaagagatcactcttcttcatgggagagtttggtggcaacgactacgtcttcatcttggccgccggaaaaaccctcgaggaacttgtcccctacgtgccaaaagtcgtccaagccatctctgcgggcatcgaggtcgtacactcgtacattttgaacgattttacaatccttaaaaaaaatgaaacaattttcacaatttacaggccgccgtaaaattttctcttacaatttacacagagctaacacttccgctgtcgcgtacgaataatattgtcattcaggcggtgataaaggaaggagcgagatacgtggtggtgccgggggagctgcccaacggctgcgtgcccatcatcctgacgctgtacgcgagcaagagcagaggcgactacgacgcgcgcggctgcctgaagaagcagaacgcgctcgcgcgctaccacaactcggcgctgttcgaggcggtgtcgcggctgaggcacaggtacccttgggtgaagatcgtctacgccgactactacaagccggtgatcgacttcatcaagaaaccggccagattcggtgagtccgttggttcaatggttaattaattcttccccttaattgcacatgcgcttttagaaatgctatctactcaattactcaccatgatcatcacagtcctcaccatgaacaagttgcattgtttgactttgcacgtgttaaaagaaaactagctaatggattttttcgcataatttttaccaagctgcttgatttcaaaattaaagtggaatggatgtacaattcacatcttctatttttacaggtatatatttgtattagtatataatttattttaaaagtgaattgggtttaatatacaactcttttcttctatttacacacttccaattgttttttttttggattatatggtagacgcatgacgcacatacaacactatacttactcacctgcgaatgagtcctataacacacacacactcaaaagagaccaaaaccagtagtatatatccctgatgttactaattcatattaaaaaatccaattacgtgtgcatagacttattttggagggcgaaatcatacaaccacaattccaccaatacacgattgatgcttctcctacttccagttgtatttttatgatcattatttttcttgttctctgggtgtgtttagttcctgaaaaaaagttggaaatttgaggaaagttgggagtttggaaaaaaagttagaaatttatgtgtgtagaaaagtttttatgtgatatgatgtgatggaaagttagaagtttggggtagttgagagtgaactaaacacggcctctattaacgtgagaatttcatgagtggaaatatggttactctacactgaactaagttttaaaagttgaattggatttcatactcatagctctggaaatattgtgcaatgctagtttttaaaagtagaggtggacttgatatatgtacaatcattaacttgtttttccataaatacaattgtacttgtatacactataatcggtctgaacccactatatgtacatcgattggtgtaaatgtttctctttttcttggatcattaatgtactaataaggtcgtctctagagcaaacattatgctaaactttcttctgataataatttaataatatgatcgatacacagactaacttggccatttcaagatctagcaatgcctctacaaattggaataagtaaagtagacacgttgcccatagtaaacgcttcgtgtactatgtacgtagactatcccctaaacggggttgaagtcgtgaagataatgccaatcgttgaattcacccattcttaaactcatcgtggcaataatccaaaattgacaactacggtctcatcgtgatcgatcaggacttaattggacttctttcgtagccgtctagctctcttgtgatcgaaccagctatagcatgtgctactccatctgtttcatattataagtcgtttgactttttatttagttaaactttgttaaatttgatcaagtttatagaaaaaatagttatattaaatctaatattaaatatattttgataatatattttttctgtgttaaaaatagtactatatctatatatatatatatagtaaatttgtttggtgctccatggtgcccgggcaccattgttgaaattgagtatatacccaattcaaatgagcatgaaactttttcaattatttaggtattaatattaactactttactaactagttgaaagcaagtttgaactgaatttgaacttgtttttgttagattttgattctaggtatatagcatccatacatataattagttaggtatgtaatcatggattgtgaaataaagttaaatttgagttgttttgttgataggtataggtatgaatcgaattcttataactaggtatatactcacaatttgaaaattttaaaaaatttgagtgattttgtgcatttgaaaccatggtgcccgagcaccatggtgccccatatgagtgtcctatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacctaataaaaaaatacgtaaggattcccgtatttcttcgtccgtcatcccacacacgcgccactaaaatctgttttaatccgagttgggtcggtccgtttttattgtatttgcaaaaccgcagttgatatagtatatgtatcttccatgtaatcgtataacacaagtggtaatttgcctgcttggtttatgtggaaaatcttcaatctggccactagggttcgactcccacctttcctctcattttacacacacctattattacttgctctgcatgcggtctctcctgtaataagtctatccctcgtgtactgtgcctataggacctccttgcctaacgggtcgggccgacgcacgttgttttggcccttattcttttttcccttattttttcacccaaaaatcattaaatgtttacataaaaaaaatttaatcactttgaaccattattttaagatataaaattgctgtaaattttgcatgtgcgttttaatttatttctaactaaatggaacccacgtgaagAaaaaaaaaagtaagtcttcgggtaaagtttttttcatcgttcatcacacgcggaatcaccttcttatatttcggcaataatttgtttttttataacgagggtttgttcagattgtagctaaaataaaccttactaaattttggcatgatattttatgtatttattagagtatgataaaaaactaaatggatacacatatttggtaactttactaaaatttgataaggtttatttaagatacaatctgaacaggccctgacatcagtttcctaatatgcaaaagcgatataaaatttcaagatttggaaggcatgtacaaatttgaaattttgtacacatgtatcatacaagtacacaagcaatattagcaatccatatttgtttgatattcacccgttgcaacgcacgggcatatttactatttattgtataaatttgatcaaattcaaagaaatttggttagaaaaaagttaaacgagatataatatgaaattgatggagtaatacccaggggcctgatcggttactgacgctgcaggattcaacggctcgtcgacgctacgcgcgtgctgcggcgccggcggcgggccgtacaactacgacgcgacggcggcgtgcgggctccccggcgcggcagcgtgcccggacccggcggcgttcatcagctgggacggcatccacctcacggaggcggcctacgcccgcatctccgccggctggctgcacggcccgtacgcgcatccgcccatcctctcggccttgcgccattagggccgtagcgtagcaccgtggcccattactgttcatgttttaggctgatttgttctatgtaatcattttttgccctgtttgtgccttagggccgacttatttttgtgtaacctgggtttaagtgtaatttgataatttcggcccatctttgtgagctggttgggccgtttcttcgt
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| CDS seq | atggggaactactcaccctcaaaaccagttgccttcctcctcctcctcctcctcttcggttgcctgcattacgctcaggcgaaccccggccatcgtcgtcccaagatcgactccgtcttcagcttcggcaactcgttcgccgacaccggcaacttcgtcgagctggccgcgccgctgcttcccatcatgcctttcaacaacctcccctacggcgagaccttcttcggccaccccaccggccgtgctaccaatggccgcatcatcatggacttcatcgctgacgagtttcatgtgccgttcgtaccaccgtttcttggccaaggtcgtcagaacttcacccatggcgctaacttcgccgtcgtcggtgccagcgctcttgatctcgccttcttcctcaagaacaacatcaccaacgtgcccccgttgaacatctccctgagcgtgcagctggagtggttccagaagctcaagccaaccttgtgccaaacagcccaagaatgcagagagtacttcaagagatcactcttcttcatgggagagtttggtggcaacgactacgtcttcatcttggccgccggaaaaaccctcgaggaacttgtcccctacgtgccaaaagtcgtccaagccatctctgcgggcatcgaggtcgccgccgtaaaattttctcttacaatttacacagagctaacacttccgctgtcgcgtacgaataatattgtcattcaggcggtgataaaggaaggagcgagatacgtggtggtgccgggggagctgcccaacggctgcgtgcccatcatcctgacgctgtacgcgagcaagagcagaggcgactacgacgcgcgcggctgcctgaagaagcagaacgcgctcgcgcgctaccacaactcggcgctgttcgaggcggtgtcgcggctgaggcacaggtacccttgggtgaagatcgtctacgccgactactacaagccggtgatcgacttcatcaagaaaccggccagattcgcgtgcccggacccggcggcgttcatcagctgggacggcatccacctcacggaggcggcctacgcccgcatctccgccggctggctgcacggcccgtacgcgcatccgcccatcctctcggccttgcgccattag
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| Protein seq | MGNYSPSKPVAFLLLLLLFGCLHYAQANPGHRRPKIDSVFSFGNSFADTGNFVELAAPLLPIMPFNNLPYGETFFGHPTGRATNGRIIMDFIADEFHVPFVPPFLGQGRQNFTHGANFAVVGASALDLAFFLKNNITNVPPLNISLSVQLEWFQKLKPTLCQTAQECREYFKRSLFFMGEFGGNDYVFILAAGKTLEELVPYVPKVVQAISAGIEVAAVKFSLTIYTELTLPLSRTNNIVIQAVIKEGARYVVVPGELPNGCVPIILTLYASKSRGDYDARGCLKKQNALARYHNSALFEAVSRLRHRYPWVKIVYADYYKPVIDFIKKPARFACPDPAAFISWDGIHLTEAAYARISAGWLHGPYAHPPILSALRH |
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| Function | GDSL esterase/lipase At1g28570 [UniProtKB/Swiss-Prot:Q9FXJ1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_01g0008020 | OsKeNa_01g0008020.01 | Chr01 | 6375722 | 6380348 | + | NAM | ||
| CDS seq | atggggaactactcaccctcaaaaccagttgccttcctcctcctcctcctcctcttcggttgcctgcattacgctcaggcgaaccccggccatcgtcgtcccaagatcgactccgtcttcagcttcggcaactcgttcgccgacaccggcaacttcgtcgagctggccgcgccgctgcttcccatcatgcctttcaacaacctcccctacggcgagaccttcttcggccaccccaccggccgtgctaccaatggccgcatcatcatggacttcatcgctgacgagtttcatgtgccgttcgtaccaccgtttcttggccaaggtcgtcagaacttcacccatggcgctaacttcgccgtcgtcggtgccagcgctcttgatctcgccttcttcctcaagaacaacatcaccaacgtgcccccgttgaacatctccctgagcgtgcagctggagtggttccagaagctcaagccaaccttgtgccaaacagcccaagaatgcagagagtacttcaagagatcactcttcttcatgggagagtttggtggcaacgactacgtcttcatcttggccgccggaaaaaccctcgaggaacttgtcccctacgtgccaaaagtcgtccaagccatctctgcgggcatcgaggtcgccgccgtaaaattttctcttacaatttacacagagctaacacttccgctgtcgcgtacgaataatattgtcattcaggcggtgataaaggaaggagcgagatacgtggtggtgccgggggagctgcccaacggctgcgtgcccatcatcctgacgctgtacgcgagcaagagcagaggcgactacgacgcgcgcggctgcctgaagaagcagaacgcgctcgcgcgctaccacaactcggcgctgttcgaggcggtgtcgcggctgaggcacaggtacccttgggtgaagatcgtctacgccgactactacaagccggtgatcgacttcatcaagaaaccggccagattcgcgtgcccggacccggcggcgttcatcagctgggacggcatccacctcacggaggcggcctacgcccgcatctccgccggctggctgcacggcccgtacgcgcatccgcccatcctctcggccttgcgccattag
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| Protein seq | MGNYSPSKPVAFLLLLLLFGCLHYAQANPGHRRPKIDSVFSFGNSFADTGNFVELAAPLLPIMPFNNLPYGETFFGHPTGRATNGRIIMDFIADEFHVPFVPPFLGQGRQNFTHGANFAVVGASALDLAFFLKNNITNVPPLNISLSVQLEWFQKLKPTLCQTAQECREYFKRSLFFMGEFGGNDYVFILAAGKTLEELVPYVPKVVQAISAGIEVAAVKFSLTIYTELTLPLSRTNNIVIQAVIKEGARYVVVPGELPNGCVPIILTLYASKSRGDYDARGCLKKQNALARYHNSALFEAVSRLRHRYPWVKIVYADYYKPVIDFIKKPARFACPDPAAFISWDGIHLTEAAYARISAGWLHGPYAHPPILSALRH
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_01g0008020 | OsKeNa_01g0008020.02 | Chr01 | 6375592 | 6380524 | + | IsoSeq | ||
| CDS seq | atggccgcatcatcatggacttcatcgctgacgagtttcatgtgccgttcgtaccaccgtttcttggccaaggtcgtcagaacttcacccatggcgctaacttcgccgtcgtcggtgccagcgctcttgatctcgccttcttcctcaagaacaacatcaccaacgtgcccc |
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| Protein seq | MAASSWTSSLTSFMCRSYHRFLAKVVRTSPMALTSPSSVPALLISPSSSRTTSPTCP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr01 | 6376974 | 6380215 | + | OsKeNa_01g0008020.02 | OsKeNa_01g0008020.01,OsKeNa_01g0008020.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.737590 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0216900 | SBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g11790 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0216900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0008380 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0008000 | SBH | 0.0 | 4.866177 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0008400 | SBH | 0.0 | 1.864694 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0007920 | SBH | 0.0 | 0.667822 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0008020 | RBH | 0.0 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0103600 | RBH | 0.0056315 | 0.3956025 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0007970 | RBH | 0.0 | 0.438153 | 0.046880 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0103900 | SBH | 0.027279 | 0.023326 | 0.003999 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0009380 | RBH | 0.0 | 0.201504 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0008000 | RBH | 0.0 | 5.738152 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0007990 | SBH | 0.0 | 14.911513 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0008010 | SBH | 0.0 | 0.702329 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0007890 | RBH | 0.0 | 3.279213 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G008020 | RBH | 0.0 | 3.260542 | 0.260550 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0007870 | SBH | 0.0 | 6.473094 | 0.832347 |
