Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKYG_12g0005820 | OGI:12011500 | 9/16 | KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | Chr12:4383686-4384164 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCGTGGATGACGGTGAGGAGGGTGCGGATGAAGTAGTACGGGAGGTCGGCGATGGAGGTGGAGTTGCGGCCAAGGAGACGTGGGGGGACAGCAAGCACCGCCTTGCGTACGTCGCCGAGACGACGATGATCTTCAAGGACATCGTGCAGATGCGGGATGAGCAGTGGTGGCGCGCGCTCACCTCCGGCTATGTCACGCAGTGGGCGGCCATGCACCAGCAGAAGGTGGACGCACTCTTCTATGCACACTCGCTCAGCGAGGTCCACGCGCTGGCGCTGCTGCTGGAGCGGTTCTGCACCACCCCCGGCTGTAAGGCTTACCTCGTCGTGTCCGGCAGTGGGCACTACCCCTGCAAGGAGGCGGCAGCGGTGCTCAAGTGGCCCAAGGTGGTGTGCAAGGAGAGGCGGTTCAAGATCTTCGACCTCGCCGTCGGCGCGCTCTCCGGCCCATCCCACTCCGAGGTGCCCGTCCTCTAG
More
|
||||||||||
| CDS seq | ATGGCGTGGATGACGGTGAGGAGGGTCGGCGATGGAGGTGGAGTTGCGGCCAAGGAGACGTGGGGGGACAGCAAGCACCGCCTTGCGTACGTCGCCGAGACGACGATGATCTTCAAGGACATCGTGCAGATGCGGGATGAGCAGTGGTGGCGCGCGCTCACCTCCGGCTATGTCACGCAGTGGGCGGCCATGCACCAGCAGAAGGTGGACGCACTCTTCTATGCACACTCGCTCAGCGAGGTCCACGCGCTGGCGCTGCTGCTGGAGCGGTTCTGCACCACCCCCGGCTGTAAGGCTTACCTCGTCGTGTCCGGCAGTGGGCACTACCCCTGCAAGGAGGCGGCAGCGGTGCTCAAGTGGCCCAAGGTGGTGTGCAAGGAGAGGCGGTTCAAGATCTTCGACCTCGCCGTCGGCGCGCTCTCCGGCCCATCCCACTCCGAGGTGCCCGTCCTCTAG
More
|
||||||||||
| Protein seq | MAWMTVRRVGDGGGVAAKETWGDSKHRLAYVAETTMIFKDIVQMRDEQWWRALTSGYVTQWAAMHQQKVDALFYAHSLSEVHALALLLERFCTTPGCKAYLVVSGSGHYPCKEAAAVLKWPKVVCKERRFKIFDLAVGALSGPSHSEVPVL |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_12g0005820 | OsKYG_12g0005820.01 | Chr12 | 4383686 | 4384164 | + | NAM | ||
| CDS seq | ATGGCGTGGATGACGGTGAGGAGGGTCGGCGATGGAGGTGGAGTTGCGGCCAAGGAGACGTGGGGGGACAGCAAGCACCGCCTTGCGTACGTCGCCGAGACGACGATGATCTTCAAGGACATCGTGCAGATGCGGGATGAGCAGTGGTGGCGCGCGCTCACCTCCGGCTATGTCACGCAGTGGGCGGCCATGCACCAGCAGAAGGTGGACGCACTCTTCTATGCACACTCGCTCAGCGAGGTCCACGCGCTGGCGCTGCTGCTGGAGCGGTTCTGCACCACCCCCGGCTGTAAGGCTTACCTCGTCGTGTCCGGCAGTGGGCACTACCCCTGCAAGGAGGCGGCAGCGGTGCTCAAGTGGCCCAAGGTGGTGTGCAAGGAGAGGCGGTTCAAGATCTTCGACCTCGCCGTCGGCGCGCTCTCCGGCCCATCCCACTCCGAGGTGCCCGTCCTCTAG
More
|
|||||||
| Protein seq | MAWMTVRRVGDGGGVAAKETWGDSKHRLAYVAETTMIFKDIVQMRDEQWWRALTSGYVTQWAAMHQQKVDALFYAHSLSEVHALALLLERFCTTPGCKAYLVVSGSGHYPCKEAAAVLKWPKVVCKERRFKIFDLAVGALSGPSHSEVPVL |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0806500 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g08300 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0806500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0005550 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0037870 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0037750 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0037330 | SBH | 0.0 | 0.077315 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0005700 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0069500 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0005670 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0594600 | SBH | 0.0066475 | 0.007517 | 0.0034305 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0005590 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0037440 | RBH | 0.0 | 1.004775 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0037560 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0005680 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0037210 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G037790 | SBH | 0.0 | 0.653020 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0037630 | SBH | 0.0 | 0.0 | 0.0 |
