Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKYG_11g0005190 | OGI:11012780 | 16/16 | KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | Chr11:4001537-4002094 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGAGGCCAAGGGAGTGGTGGTGATCACCCTTGTGGTCGCACTTGCGGCGGTTGCGAGGGCGGCCCGCCCGGAAGAAACCGGGCCGGGCTTGGCCCGCCGCGGGTCAGTATCCTCACCGACGACTCACCTGCACTTCTACTTCCACGACAAGGTGAGCAAGCCATCACCGACGGCAGTGCGGGTGGTGGACCCGGTGGACCCGTCATCGCGGTCCTTCTTTGGGATGATCAACGTCATGGACGATCCGCTGACAGAGGGGCCCGAGCCCGAGTCCAAGCCCATGGGCCGGGCCCAGGGGCTGTACATGGGCTCGGACCAGGCCAAGCTGGGCTTCCTCCAGGCAATGAACCTGGTGTTCACCGACGGCACCTACAACGGCAGCGTGGTCACCGTGCTCGGCCGCAACTGCCCCTTGGACGACGTCCGGGAGATGCCGGTGATCGGCGGCACCGGCGCCTTCCGCTTCGCCCGCGGCTACGCCCAGGCCAGGACGCACACCCTGGACCTCAAGACCGGCGACGCCATTGTCGAGTACAACGTCTACGTCATGCACTGA
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| CDS seq | ATGGAGGCCAAGGGAGTGGTGGTGATCACCCTTGTGGTCGCACTTGCGGCGGTTGCGAGGGCGGCCCGCCCGGAAGAAACCGGGCCGGGCTTGGCCCGCCGCGGGTCAGTATCCTCACCGACGACTCACCTGCACTTCTACTTCCACGACAAGGTGAGCAAGCCATCACCGACGGCAGTGCGGGTGGTGGACCCGGTGGACCCGTCATCGCGGTCCTTCTTTGGGATGATCAACGTCATGGACGATCCGCTGACAGAGGGGCCCGAGCCCGAGTCCAAGCCCATGGGCCGGGCCCAGGGGCTGTACATGGGCTCGGACCAGGCCAAGCTGGGCTTCCTCCAGGCAATGAACCTGGTGTTCACCGACGGCACCTACAACGGCAGCGTGGTCACCGTGCTCGGCCGCAACTGCCCCTTGGACGACGTCCGGGAGATGCCGGTGATCGGCGGCACCGGCGCCTTCCGCTTCGCCCGCGGCTACGCCCAGGCCAGGACGCACACCCTGGACCTCAAGACCGGCGACGCCATTGTCGAGTACAACGTCTACGTCATGCACTGA
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| Protein seq | MEAKGVVVITLVVALAAVARAARPEETGPGLARRGSVSSPTTHLHFYFHDKVSKPSPTAVRVVDPVDPSSRSFFGMINVMDDPLTEGPEPESKPMGRAQGLYMGSDQAKLGFLQAMNLVFTDGTYNGSVVTVLGRNCPLDDVREMPVIGGTGAFRFARGYAQARTHTLDLKTGDAIVEYNVYVMH |
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| Function | Dirigent protein 21 [UniProtKB/Swiss-Prot:Q9SS03] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_11g0005190 | OsKYG_11g0005190.01 | Chr11 | 4001537 | 4002094 | + | NAM | ||
| CDS seq | ATGGAGGCCAAGGGAGTGGTGGTGATCACCCTTGTGGTCGCACTTGCGGCGGTTGCGAGGGCGGCCCGCCCGGAAGAAACCGGGCCGGGCTTGGCCCGCCGCGGGTCAGTATCCTCACCGACGACTCACCTGCACTTCTACTTCCACGACAAGGTGAGCAAGCCATCACCGACGGCAGTGCGGGTGGTGGACCCGGTGGACCCGTCATCGCGGTCCTTCTTTGGGATGATCAACGTCATGGACGATCCGCTGACAGAGGGGCCCGAGCCCGAGTCCAAGCCCATGGGCCGGGCCCAGGGGCTGTACATGGGCTCGGACCAGGCCAAGCTGGGCTTCCTCCAGGCAATGAACCTGGTGTTCACCGACGGCACCTACAACGGCAGCGTGGTCACCGTGCTCGGCCGCAACTGCCCCTTGGACGACGTCCGGGAGATGCCGGTGATCGGCGGCACCGGCGCCTTCCGCTTCGCCCGCGGCTACGCCCAGGCCAGGACGCACACCCTGGACCTCAAGACCGGCGACGCCATTGTCGAGTACAACGTCTACGTCATGCACTGA
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| Protein seq | MEAKGVVVITLVVALAAVARAARPEETGPGLARRGSVSSPTTHLHFYFHDKVSKPSPTAVRVVDPVDPSSRSFFGMINVMDDPLTEGPEPESKPMGRAQGLYMGSDQAKLGFLQAMNLVFTDGTYNGSVVTVLGRNCPLDDVREMPVIGGTGAFRFARGYAQARTHTLDLKTGDAIVEYNVYVMH |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0180000 | RBH | 0.0 | 0.0 | 6.078711 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g07830 | RBH | 0.0 | 0.0 | 1.299786 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0180000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0005310 | RBH | 0.0 | 94.876671 | 22.437851 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0005280 | RBH | 0.0 | 14.842313 | 1.835921 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0005310 | RBH | 0.0 | 94.938271 | 2.954600 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0005170 | RBH | 0.0 | 0.549844 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0005090 | RBH | 0.0 | 81.343010 | 39.770550 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0067700 | RBH | 0 | 3.4218665 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0005170 | RBH | 0.0 | 4.667743 | 1.053882 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0067500 | RBH | 19.4276725 | 7.0003815 | 12.3106675 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0005130 | RBH | 0.0 | 0.395864 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0005220 | SBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0005220 | RBH | 0.0 | 154.225357 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0005200 | RBH | 0.0 | 0.0 | 1.311455 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0005190 | RBH | 0.0 | 24.617140 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G005250 | RBH | 0.0 | 2.380270 | 2.214742 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0005140 | RBH | 0.0 | 116.492516 | 23.447390 |
