Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKYG_06g0025330 | OGI:06077030 | 16/16 | KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | Chr06:28528793-28534148 | ||||||||
| Gene Symbol | RLCK211, OsRLCK211 | ||||||||||
| DNA seq | ggcagtgaaaacaaaaccatactccaaaaacaaactgtcaacaaacggacactgattcatcttatatttttccatcttcttgttgatttcctgtagaactgtaccaagtttgcaaggacatcatcatctatacagaaaagtcaaaaacactcgagcaacaacaacactgacacatcgattatgatgtggatcttcttcttcccagagaatggtttcaagtttacaacacgaacttttcgtcgcggcaggcatctcacattacaaatgctttccacaacgctcctctctacatacaattgctagtcggaacagcaagaaacctaacgaggtagagttcttccgccatcagaaaaaattttaacaccaactttgactctgatcgatcttgacaacaagatggatggatggcaatgcgaaatcgccggtagcgaaaacttgaatcgtcatcaaaaacttgtgtgacttttatatcttgtacaaatcctcgtccggtggatcctttatgcttccatctctggaaggggatgacaatgcctccaggcctggctgctggccatcagagtctggagatgggatgtacagcttgcattccaaagacggctcgctcttgctccggccattccctggccgtgttctcctgctctgaggcacgggttttccatttaccggtgccggtgccacggtgaccgtttttgctgctggttgttcttgttttatcttctctggctcgacgctctccgtagggtcctttgcaacctcgtagagtgtcactgcacccgtcatgcagttctgcaagagtatgtcttggcattcaggcatgttttgcacagcctcaaaggtctcaacaacctggctcatggtgggtcgtcctttgggattctggctcaagcatcggtacgcaaggcctgccacctcaatggcagccttggtggagtactgcccttccattcttggatcgataatcctgaacagcttccgattgtgcacgaggaggggacgtgcccactcaactaggttgtgctcacggctaggccggctcttgtccacagccctcctgcctatgatcatctcgagaaggacgacaccaaagccatagacatcacttcgtgctgtcagatggcctgtaacagatcaaactggttagagtaacaatttaacatacatgatgtcagctacaatgatatgcatattcatacttaagaacattaaatgcactcaagaatgaacgggttggcattctaaaaatacagggagattccattgcttacctgtcatgacatattcaggagctgcatagccataagtacccatgacccgagttgatacatgggtttggtctccactaggtccagttcgtgctaggccaaagtctgacagcttggcattataatcctgcagaggtgacacagagtgagactgcggcagtatcataagataatcttcaacatataacatcccaagatctgaaataagatatttagatcagtattccttgtgcagagttgcatggtttaattggatggatgagggcacacataatatctactatttaaagtggaaccatggaggaggaccagggacaaataaatgattgatcaagtgtttcatttgtaatcgtccttacatactacagttgcatcttggcaatagaaatatcacaaaaagattgacaaataagtgacgtacaaacataaaaacatcattactgcatggtttggcaatgggaaacactttttgctgtgtcacactaataaattgagaatattaaaaagatttcagtcgaaatatcagtggtaaacaggactgtgttgaagagctagcgggaccagatccaaactggtacgttattgagatcgctgatgtttagaatcttactgctaaaagaattgaatcattcattcatcagaagatttagtagctttgaccatgctggcagcaactgaaaccaccatgacggtttggagggcaagcacactattctatcactacttcagaatcttggattctgtaaagacagttatgggccttatggctagcatgtaggctaagttatccggttaactgttagttctgtcattccaagagttcagaacaatgtaggaaatggaatcttgtctgggttggaaagaacaaagttgctagagcctgatgagatggaattcctataacaagtgattgaaaaagggtaatgatatcaaagtattcagatagtagatgaagtacaaaccgcatctaacaagatgtttgatgttttgaaatctcgatatataattgatctctcagctccgtgaagatattccagCccccttgcagcacctagagcaatcttcattcgagtagaccatggcatattaaggcaaacccctgttatcaattatcatacgagcaagaagataaatcaacaaaagtgtcctttagcatggaaaaatgcatgttctctcaatagatcaatcaaaggtgagcaagccatgcagcaagaaaatcgtttcttcttttttcactagtagcgtagttagcatgtgcatgcagattgtagaatcaactaaacagttcaactcagacaaaatcaactggccaacttgatgatacggccggtaaattaaatacttcctccgtttcacaatgtaagtcattctagcatttcccacatacatattgatgttaatgaatctagatagatatacatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtagctagttgggacttgggagaacttcaaaacatatgctaaccattatcgtttcaaaagaaaatcctttatttttgaaaattacatggagggaacgggtacacagatacaactaaattgtatatagtggtcactactcattagattaaattgcaccagtaaatcgagcactgaaagaaatataagtgtgaatgcatttatattaattctactgatagatctgctcatcttgttgaaaataaattagtgtttttgttcatgcagcgtgcaccaaactgaccattttcctttttacttttgaaaatgcaaaaacaataaacatgttgcaggttctgctgccatggacaacggccattcagtaggtgggagtgataactgtcaagaaggaaagggtcagcttacggcgaaaaagatgcttttcaaggctgccgcaagccatgtactcgtaaacaagcagtctatgagagccttcacagcaatacccaatcagttcgactagatttggatggctaagttgcccaaggtagttgacttctgcctggaaacaaataataaaactataagtatctgatatatgctgtttaatcaaacactaatcagtataaaagtactctttcaatgtccttgcttaaaatcataaaatgtaaataagtcaggtaatatagaaactacaataacaaacaactattatgatcattaaattgaatcgtaaaatctaattagctgatgaaggctgatagacttgtgtatagttcatcatggtttcaaaaaaaatgaaataaagcaaggatacttaccaaccattccttgtcaccctgaaatccctctgggtttaattctttcacagcaacttgtgtggatggaaagcccgctctaacattttcatcaattacacctttgtaaacaacaccaaacccaccctctccaagaatttggtcaggccggaagttttttgtggctgctcttagttcattatatgtgaaaatattaacatttccgtatccttcgatttgcaggtcctccacatcttttggaggggcaaggacacttgctgtagctttagaatcagatttgcatttccttaacccatctggcccaccagcttctgcttatagaattaatagaaaagaaaaaacatcagggaataatcaattacatacgaacattaagagctacaatgtggcgtgattattttgccttagtactttagttttttaattcatataacaccccccatacagctcctgctgtgcagtctctgtaatgttgttgtgcattatgtcaaaatgataatctaataagcataacatcttagtttgtaaataccactaacctacccaaaatggtgttcatcttctaacttaagaaacatgtgttccattgtgtcaagctacaatgtcattttgcaatagctctacagcaacaaaagtattcattgatcatcctccacgttcaagtggcaggttaatgtgcagctaaaggccatgacatgacaaaggaaggtcccaatttaatttggtatctcaataaaattctagaatagctccaaacacgcatttgctgctcatggtcctatatgcaggacaacatttgtcatctcttccagtctctgaacaagaatcttctatgcagaacagaccatttgcatctaagttatagggttactcgatacttccatccaaccaacttaaaatcttctagcaactttgccaatgtagttcaaaccaagttatgagctaaatttgacttgctgcagtttgacttttcaggaaccgtgattgcaaatttcatagacaacataccagtacatcataatatcgtgtcctctaccagccatcaaagagcaaagtttgtaccatgcaagtttcgtctttgtcaaagaaaaaagagaaactaagctacagatagaggcctgaatgtaacgatgtccaataagataaaacttttagcacttagagaatggcattcctcacactcgacactcagtcacagaagaatcaaacatcaaccacacgatgcctaaaaaacccgaatttgcaacacgagttactacatgatatagccccagagacaaaattgatcctgtcggaactctgacataaacgagacagcaattctcgctcaaaaaccaaatcttctgaagctgaatatacgctgaaaatccatagcccccaatacgcccaaaaacccaaccgcacgactaaattcacaaccaaattacaacaaaaacttcacttccatgcaacatgcacacagctactactactactacaagcaaaaacacacatcagagactaagtaagatatatatatatagctcgaggcaagaaagaacacggacgaacctgtcttgccctggagccggtgctcctccagcgagaagcatccgcccatgggagcccccaacaccgcgcctcccactccaatccgccgctccccctactcccgcctccccatcgccagcctcctgccagatccactcccaagaacacacaccaccaccagtccaccaccaccaacccaagccccgcgcaccaacccggaaatttcgcccgcaccgactccgccgcttggttgggcggaattgctccgccgccgccg
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| CDS seq | atgggcggatgcttctcgctggaggagcaccggctccagggcaagacagaagctggtgggccagatgggttaaggaaatgcaaatctgattctaaagctacagcaagtgtccttgcccctccaaaagatgtggaggacctgcaaatcgaaggatacggaaatgttaatattttcacatataatgaactaagagcagccacaaaaaacttccggcctgaccaaattcttggagagggtgggtttggtgttgtttacaaaggtgtaattgatgaaaatgttagagcgggctttccatccacacaagttgctgtgaaagaattaaacccagagggatttcagggtgacaaggaatggttggcagaagtcaactaccttgggcaacttagccatccaaatctagtcgaactgattgggtattgctgtgaaggctctcatagactgcttgtttacgagtacatggcttgcggcagccttgaaaagcatctttttcgccgggtttgccttaatatgccatggtctactcgaatgaagattgctctaggtgctgcaaggggGctggaatatcttcacggagctgagagatcaattatatatcgagatttcaaaacatcaaacatcttgttagatgcggattataatgccaagctgtcagactttggcctagcacgaactggacctagtggagaccaaacccatgtatcaactcgggtcatgggtacttatggctatgcagctcctgaatatgtcatgacaggccatctgacagcacgaagtgatgtctatggctttggtgtcgtccttctcgagatgatcataggcaggagggctgtggacaagagccggcctagccgtgagcacaacctagttgagtgggcacgtcccctcctcgtgcacaatcggaagctgttcaggattatcgatccaagaatggaagggcagtactccaccaaggctgccattgaggtggcaggccttgcgtaccgatgcttgagccagaatcccaaaggacgacccaccatgagccaggttgttgagacctttgaggctgtgcaaaacatgcctgaatgccaagacatactcttgcagaactgcatgacgggtgcagtgacactctacgaggttgcaaaggaccctacggagagcgtcgagccagagaagataaaacaagaacaaccagcagcaaaaacggtcaccgtggcaccggcaccggtaaatggaaaacccgtgcctcagagcaggagaacacggccagggaatggccggagcaagagcgagccgtctttggaatgcaagctgtacatcccatctccagactctgatggccagcagccaggcctggaggcattgtcatccccttccagagatggaagcataaaggatccaccggacgaggatttgtacaagatataa
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| Protein seq | MGGCFSLEEHRLQGKTEAGGPDGLRKCKSDSKATASVLAPPKDVEDLQIEGYGNVNIFTYNELRAATKNFRPDQILGEGGFGVVYKGVIDENVRAGFPSTQVAVKELNPEGFQGDKEWLAEVNYLGQLSHPNLVELIGYCCEGSHRLLVYEYMACGSLEKHLFRRVCLNMPWSTRMKIALGAARGLEYLHGAERSIIYRDFKTSNILLDADYNAKLSDFGLARTGPSGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLEMIIGRRAVDKSRPSREHNLVEWARPLLVHNRKLFRIIDPRMEGQYSTKAAIEVAGLAYRCLSQNPKGRPTMSQVVETFEAVQNMPECQDILLQNCMTGAVTLYEVAKDPTESVEPEKIKQEQPAAKTVTVAPAPVNGKPVPQSRRTRPGNGRSKSEPSLECKLYIPSPDSDGQQPGLEALSSPSRDGSIKDPPDEDLYKI |
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| Function | Probable serine/threonine-protein kinase PBL17 [UniProtKB/Swiss-Prot:Q8H1E3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_06g0025330 | OsKYG_06g0025330.01 | Chr06 | 28528793 | 28534148 | - | NAM | ||
| CDS seq | atgggcggatgcttctcgctggaggagcaccggctccagggcaagacagaagctggtgggccagatgggttaaggaaatgcaaatctgattctaaagctacagcaagtgtccttgcccctccaaaagatgtggaggacctgcaaatcgaaggatacggaaatgttaatattttcacatataatgaactaagagcagccacaaaaaacttccggcctgaccaaattcttggagagggtgggtttggtgttgtttacaaaggtgtaattgatgaaaatgttagagcgggctttccatccacacaagttgctgtgaaagaattaaacccagagggatttcagggtgacaaggaatggttggcagaagtcaactaccttgggcaacttagccatccaaatctagtcgaactgattgggtattgctgtgaaggctctcatagactgcttgtttacgagtacatggcttgcggcagccttgaaaagcatctttttcgccgggtttgccttaatatgccatggtctactcgaatgaagattgctctaggtgctgcaaggggGctggaatatcttcacggagctgagagatcaattatatatcgagatttcaaaacatcaaacatcttgttagatgcggattataatgccaagctgtcagactttggcctagcacgaactggacctagtggagaccaaacccatgtatcaactcgggtcatgggtacttatggctatgcagctcctgaatatgtcatgacaggccatctgacagcacgaagtgatgtctatggctttggtgtcgtccttctcgagatgatcataggcaggagggctgtggacaagagccggcctagccgtgagcacaacctagttgagtgggcacgtcccctcctcgtgcacaatcggaagctgttcaggattatcgatccaagaatggaagggcagtactccaccaaggctgccattgaggtggcaggccttgcgtaccgatgcttgagccagaatcccaaaggacgacccaccatgagccaggttgttgagacctttgaggctgtgcaaaacatgcctgaatgccaagacatactcttgcagaactgcatgacgggtgcagtgacactctacgaggttgcaaaggaccctacggagagcgtcgagccagagaagataaaacaagaacaaccagcagcaaaaacggtcaccgtggcaccggcaccggtaaatggaaaacccgtgcctcagagcaggagaacacggccagggaatggccggagcaagagcgagccgtctttggaatgcaagctgtacatcccatctccagactctgatggccagcagccaggcctggaggcattgtcatccccttccagagatggaagcataaaggatccaccggacgaggatttgtacaagatataa
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| Protein seq | MGGCFSLEEHRLQGKTEAGGPDGLRKCKSDSKATASVLAPPKDVEDLQIEGYGNVNIFTYNELRAATKNFRPDQILGEGGFGVVYKGVIDENVRAGFPSTQVAVKELNPEGFQGDKEWLAEVNYLGQLSHPNLVELIGYCCEGSHRLLVYEYMACGSLEKHLFRRVCLNMPWSTRMKIALGAARGLEYLHGAERSIIYRDFKTSNILLDADYNAKLSDFGLARTGPSGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLEMIIGRRAVDKSRPSREHNLVEWARPLLVHNRKLFRIIDPRMEGQYSTKAAIEVAGLAYRCLSQNPKGRPTMSQVVETFEAVQNMPECQDILLQNCMTGAVTLYEVAKDPTESVEPEKIKQEQPAAKTVTVAPAPVNGKPVPQSRRTRPGNGRSKSEPSLECKLYIPSPDSDGQQPGLEALSSPSRDGSIKDPPDEDLYKI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.174637 | 20.024321 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0663200 | RBH | 1.212918 | 1.356540 | 5.473973 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g45280 | RBH | 0.819876 | 0.913208 | 1.408933 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0663200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0025360 | RBH | 0.277099 | 10.919856 | 5.690422 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0025170 | RBH | 0.112197 | 6.003850 | 1.834679 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0025340 | RBH | 0.808655 | 17.164263 | 7.944928 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0024920 | RBH | 0.168492 | 0.331042 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0025420 | RBH | 5.577998 | 18.245577 | 16.173170 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0429500 | RBH | 2.215035 | 19.5953825 | 6.8988365 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0024920 | RBH | 0.046472 | 1.037745 | 1.251435 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0411500 | RBH | 4.0621435 | 23.687837 | 6.785389 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0025310 | RBH | 0.494965 | 0.116611 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0006410 | RBH | 0.0 | 12.452258 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0024960 | RBH | 2.533830 | 21.148693 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0025560 | RBH | 0.674543 | 1.785454 | 1.948994 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0025220 | RBH | 0.320032 | 11.887714 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G025080 | RBH | 0.363326 | 4.161841 | 3.153053 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0025190 | RBH | 1.623046 | 12.100799 | 7.632448 |
