Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsKYG_05g0005970 OGI:05015390 | 15/16 KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) Chr05:5523119-5524184
Gene Symbol -
DNA seq

CTAGGCGACGTAGTACATAGGGTTAGGGTACTTGAAGGTGCGGCAACCCTCCGGTGATCCGAGGTCGCTCCACTGGTCACCGATGTTGCCGATAATGATATAGCTGGCGTCTACCAGCTTTTTCCGCTCACTATCTTGAACGCTTGAGTTGAGGTTTGGAGCCCAACTGGCTGGAGCAGTAGCTTCTCCTAGCTAGAGTAGCCCTGTGAGAGGAGGTTGTGGGTGGTGACACCTATTTGGTCCTCGGTGCGGCCGGATAGGAACACCGGCTTGATTCCGAGCTGGAGCAGCCGATGGTAGAGTCGCAGCGTCCCTTGCAATGACAGAGCCCTCACTCTAGCCACATACTGGAGGAAGCTCGCGTTGGTCGTATGGCTGAACTCTGGAAAGGGAAATGATGATTTAAAAATGATAATCGCCAACCAATACAACAAGTTTTATGAACTTTTTCTATTATATGAAAAACACGAGCATGCATACACCACCACGCATGTACGCACGCTCATGAGAGTGATGGAGAACAACTGCAAGTCACTGACCCATTAAATTCTTACGGGACTCCCGTGTGTGTAATATTCATGGGCAAGAATTTGAATCGTGGTTTGGTGAAGTCTTGCACCCAAAACTCTACCATCATAGCGCCGGTGTTTTCATCGATGGGTCACTGTTGCTGATACTATGGAGTAGTGCATATGTGTTAGCTATTTTTTTTATTAACTACAGCTTCTTTTATTGAAAAAGAGTTCATATATAATTATAATTTGCTAATTGTTATTTGGAATCAAATAAATTAAATAGTCAAAGTAAGAGTTTAAGGTACACATTTATATTTATTAATTCCAAATTTACTTTTTTACAGGGAAGGAATTATTAAATTTTATGCATGATAGAAAAAAAATAGTACTTTGACCTAGTGTTTGAGTATATATATGTACCCGTAGCCATGCTTGGCCTGGTAGGGCAGGGTGAAGAGGGTGGTCTCGTCGATGTCGAACACCCAGATCTCCTTGCCATGGCCGGAGAGCTTGAGGCTCTCGGCGTAGGTGATGGCCTCGTTGATGACCAC

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CDS seq

GTGGTCATCAACGAGGCCATCACCTACGCCGAGAGCCTCAAGCTCTCCGGCCATGGCAAGGAGATCTGGGTGTTCGACATCGACGAGACCACCCTCTTCACCCTGCCCTACCAGGCCAAGCATGGCTACGGAGTGAGGGCTCTGTCATTGCAAGGGACGCTGCGACTCTACCATCGGCTGCTCCAGCTCGGAATCAAGCCGGTGTTCCTATCCGGCCGCACCGAGGACCAAATAGGAGAAGCTACTGCTCCAGCCAGTTGGGCTCCAAACCTCAACTCAAGCGTTCAAGATAGTGAGCGGAAAAAGCTGGTAGACGCCAGCTATATCATTATCGGCAACATCGGTGACCAGTGGAGCGACCTCGGATCACCGGAGGGTTGCCGCACCTTCAAGTACCCTAACCCTATGTACTACGTCGCCTAG

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Protein seq

VVINEAITYAESLKLSGHGKEIWVFDIDETTLFTLPYQAKHGYGVRALSLQGTLRLYHRLLQLGIKPVFLSGRTEDQIGEATAPASWAPNLNSSVQDSERKKLVDASYIIIGNIGDQWSDLGSPEGCRTFKYPNPMYYVA

Function Vegetative storage protein 2 [UniProtKB/Swiss-Prot:O82122]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsKYG_05g0005970 OsKYG_05g0005970.01 Chr05 5523119 5524184 - NAM
CDS seq

GTGGTCATCAACGAGGCCATCACCTACGCCGAGAGCCTCAAGCTCTCCGGCCATGGCAAGGAGATCTGGGTGTTCGACATCGACGAGACCACCCTCTTCACCCTGCCCTACCAGGCCAAGCATGGCTACGGAGTGAGGGCTCTGTCATTGCAAGGGACGCTGCGACTCTACCATCGGCTGCTCCAGCTCGGAATCAAGCCGGTGTTCCTATCCGGCCGCACCGAGGACCAAATAGGAGAAGCTACTGCTCCAGCCAGTTGGGCTCCAAACCTCAACTCAAGCGTTCAAGATAGTGAGCGGAAAAAGCTGGTAGACGCCAGCTATATCATTATCGGCAACATCGGTGACCAGTGGAGCGACCTCGGATCACCGGAGGGTTGCCGCACCTTCAAGTACCCTAACCCTATGTACTACGTCGCCTAG

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Protein seq

VVINEAITYAESLKLSGHGKEIWVFDIDETTLFTLPYQAKHGYGVRALSLQGTLRLYHRLLQLGIKPVFLSGRTEDQIGEATAPASWAPNLNSSVQDSERKKLVDASYIIIGNIGDQWSDLGSPEGCRTFKYPNPMYYVA

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_05g0189900 SBH 0.665846 0.0 0.000000
Nipponbare | IRGSP 1.0 | MSU LOC_Os05g09724 SBH 0.434481 0.0 0.000000
Nipponbare | IRGSP 1.0 | RAP-db Os05g0189900 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_05g0006050 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_05g0006110 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_05g0005990 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_05g0006080 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_05g0006120 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_05G0085000 SBH 120.9068375 0.02582 17.211985
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_05g0005970 SBH 0.0 0.0 2.088121
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_05G0083600 SBH 15.486833 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_05g0006030 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_05g0006050 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_05g0006120 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_05g0006090 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_05G005930 SBH 0.0 0.0 12.592359
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_05g0006100 SBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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