Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKYG_04g0007420 | OGI:09005370 | 16/16 | KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | Chr04:14689629-14690881 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTACGCACCATCTCGATCGCACATGAACTGGTACACCCAAGTCTCCACAGTCGTGTCAGCAGAAGAAGCAAGAAATCCCCGCACCCCCTCATTCTCTTGGCGTCCCAAATAATTTCCAACGACAACCTTATCATTAGTACTAATGGGCAATGCATCAATCCTCTTCCACAATGAAGCATAAGGGTCACAAAACTGTGGCACTGGAGGTGGAGGAGGAGGATTACCAAGCTGATCCACCAAATGGTCCATTGTGTTGCTAATTTTCTCAGTGGCATCTGTGAAACGGTTCTTAGGCTTTGGTTGCTGCTTCTTACTTGGGGACTTTGAACCTCTTGGTCTCTTTTTACCAGCTCGAGATGTACCAGAAGAACCATTATCTGCACATGTGGGAGATGGTAATGTGTCCGAGTCTTCTGCAGCAATGTCGATAGGACGTGCATAGCTGGAAATATCATTCAATCCTTCATCGTCACTGCTATCAGATTTGTTATCAACGTCACAACATGTTCGTTGGTCCATGGCAAGAGAGCCATCTGCGTTACTACCTGAGAAAAGCTCTTGCATCTCATGAAAGTATTTTATTGGCTTAGAAAGCAAACGCCTATCCCTATCCTGCATGTTGATAGAATAATTAGTAAAAAGGCAAACCATGGAAGAATCTAATAATTCTCAAGAAAGCTAAATTTAAATGTGAGCAGAAGTATTGTGTTATAATATACTTGCTAACTTAAATCTGTACAAAAGCATGGCAATACATTTTTTACAAGAAATTGGCACATATTCATGAGCAATCAAAACTATCCATTTACACATTACGAAAAGTATATATTGATAAAATCCTCAAAATAGTTGACCTCATAGAACTAATGGCAAAAAAAAATTAAATGTTTATAGCAGCCACTTACTTTGAGAGTAGCCTTTTCAGACTCTGATATGGTCAGTTTACATTTAATAGCATCAAAACCATTGCCACTCTTGTTTAAAGCCGTTTCAACTATCTTCCAGTTCTCTTTGTAGTGCCTATAGTGACGGGTCACTTGGGCAGACGTTACACCCATAGCAAACTCTTTATTTAAGGCATCAGCACATTTCATATGGTGCTGAGATTTCCATATGAAGTTTGCATGTTGGTCTTTCTTGTACTCGATGTACCAATCAAGCATGAACTTAGTTTGTTCATCATCCCAACTAATGGATCTCTCACGAGAAGACCCTTCAGTCTCAACCTTCCCCTTTCCCTTGGCTTTCCCCAT
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| CDS seq | ATGGGGAAAGCCAAGGGAAAGGGGAAGGTTGAGACTGAAGGGTCTTCTCGTGAGAGATCCATTAGTTGGGATGATGAACAAACTAAGTTCATGCTTGATTGGTACATCGAGTACAAGAAAGACCAACATGCAAACTTCATATGGAAATCTCAGCACCATATGAAATGTGCTGATGCCTTAAATAAAGAGTTTGCTATGGGTGTAACGTCTGCCCAAGTGACCCGTCACTATAGGCACTACAAAGAGAACTGGAAGATAGTTGAAACGGCTTTAAACAAGAGTGGCAATGGTTTTGATGCTATTAAATGTAAACTGACCATATCAGAGTCTGAAAAGGCTACTCTCAAAGATAGGGATAGGCGTTTGCTTTCTAAGCCAATAAAATACTTTCATGAGATGCAAGAGCTTTTCTCAGGTAGTAACGCAGATGGCTCTCTTGCCATGGACCAACGAACATGTTGTGACGTTGATAACAAATCTGATAGCAGTGACGATGAAGGATTGAATGATATTTCCAGCTATGCACGTCCTATCGACATTGCTGCAGAAGACTCGGACACATTACCATCTCCCACATGTGCAGATAATGGTTCTTCTGGTACATCTCGAGCTGGTAAAAAGAGACCAAGAGGTTCAAAGTCCCCAAGTAAGAAGCAGCAACCAAAGCCTAAGAACCGTTTCACAGATGCCACTGAGAAAATTAGCAACACAATGGACCATTTGGTGGATCAGCTTGGTAATCCTCCTCCTCCACCTCCAGTGCCACAGTTTTGTGACCCTTATGCTTCATTGTGGAAGAGGATTGATGCATTGCCCATTAGTACTAATGATAAGGTTGTCGTTGGAAATTATTTGGGACGCCAAGAGAATGAGGGGGTGCGGGGATTTCTTGCTTCTTCTGCTGACACGACTGTGGAGACTTGGGTGTACCAGTTCATGTGCGATCGAGATGGTGCGTAG
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| Protein seq | MGKAKGKGKVETEGSSRERSISWDDEQTKFMLDWYIEYKKDQHANFIWKSQHHMKCADALNKEFAMGVTSAQVTRHYRHYKENWKIVETALNKSGNGFDAIKCKLTISESEKATLKDRDRRLLSKPIKYFHEMQELFSGSNADGSLAMDQRTCCDVDNKSDSSDDEGLNDISSYARPIDIAAEDSDTLPSPTCADNGSSGTSRAGKKRPRGSKSPSKKQQPKPKNRFTDATEKISNTMDHLVDQLGNPPPPPPVPQFCDPYASLWKRIDALPISTNDKVVVGNYLGRQENEGVRGFLASSADTTVETWVYQFMCDRDGA |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_04g0007420 | OsKYG_04g0007420.01 | Chr04 | 14689629 | 14690881 | - | NAM | ||
| CDS seq | ATGGGGAAAGCCAAGGGAAAGGGGAAGGTTGAGACTGAAGGGTCTTCTCGTGAGAGATCCATTAGTTGGGATGATGAACAAACTAAGTTCATGCTTGATTGGTACATCGAGTACAAGAAAGACCAACATGCAAACTTCATATGGAAATCTCAGCACCATATGAAATGTGCTGATGCCTTAAATAAAGAGTTTGCTATGGGTGTAACGTCTGCCCAAGTGACCCGTCACTATAGGCACTACAAAGAGAACTGGAAGATAGTTGAAACGGCTTTAAACAAGAGTGGCAATGGTTTTGATGCTATTAAATGTAAACTGACCATATCAGAGTCTGAAAAGGCTACTCTCAAAGATAGGGATAGGCGTTTGCTTTCTAAGCCAATAAAATACTTTCATGAGATGCAAGAGCTTTTCTCAGGTAGTAACGCAGATGGCTCTCTTGCCATGGACCAACGAACATGTTGTGACGTTGATAACAAATCTGATAGCAGTGACGATGAAGGATTGAATGATATTTCCAGCTATGCACGTCCTATCGACATTGCTGCAGAAGACTCGGACACATTACCATCTCCCACATGTGCAGATAATGGTTCTTCTGGTACATCTCGAGCTGGTAAAAAGAGACCAAGAGGTTCAAAGTCCCCAAGTAAGAAGCAGCAACCAAAGCCTAAGAACCGTTTCACAGATGCCACTGAGAAAATTAGCAACACAATGGACCATTTGGTGGATCAGCTTGGTAATCCTCCTCCTCCACCTCCAGTGCCACAGTTTTGTGACCCTTATGCTTCATTGTGGAAGAGGATTGATGCATTGCCCATTAGTACTAATGATAAGGTTGTCGTTGGAAATTATTTGGGACGCCAAGAGAATGAGGGGGTGCGGGGATTTCTTGCTTCTTCTGCTGACACGACTGTGGAGACTTGGGTGTACCAGTTCATGTGCGATCGAGATGGTGCGTAG
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| Protein seq | MGKAKGKGKVETEGSSRERSISWDDEQTKFMLDWYIEYKKDQHANFIWKSQHHMKCADALNKEFAMGVTSAQVTRHYRHYKENWKIVETALNKSGNGFDAIKCKLTISESEKATLKDRDRRLLSKPIKYFHEMQELFSGSNADGSLAMDQRTCCDVDNKSDSSDDEGLNDISSYARPIDIAAEDSDTLPSPTCADNGSSGTSRAGKKRPRGSKSPSKKQQPKPKNRFTDATEKISNTMDHLVDQLGNPPPPPPVPQFCDPYASLWKRIDALPISTNDKVVVGNYLGRQENEGVRGFLASSADTTVETWVYQFMCDRDGA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g02720 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0117150 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0016500 | SBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0001400 | SBH | 0.0 | 0.0 | 0.689684 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0003900 | SBH | 0.0 | 0.091281 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0009070 | SBH | 0.000000 | 0.0 | 0.721153 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0148300 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0022390 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0224200 | RBH | 0.0361485 | 0 | 0.035754 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0007170 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0015130 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0015640 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0015420 | SBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0007710 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G015600 | SBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0003860 | SBH | 0.0 | 0.0 | 0.0 |
