Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKYG_02g0027850 | OGI:02076750 | 1/16 | KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | Chr02:28680274-28682095 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCAGCATGCTACTGGAATGAGCACAACAGAGAGCAGGCAAGTAAACCTGAATGTATACATCAGGTTGTCCCAAGCTGATAACAAGATTTATACTCCACCACTTATACCTCAAACAAAAGGAATGACATCTCTGCCTGCAGTCTAACCCAAGCATGTAGAAGATAACCTCACCAGCACCAAGCTCCCCAAATATTCGCACTTCCAACACAGTAAAATGCATTTTAGATGGACCCCTTTTCATACCAAAATTTAGCTCATCTGAGAAATTGCAGTTCACATTTAACGAATCATCTTCACCATTCAGACCCAAGTGACCTGCTAGCCATAGTTTGATTCCTGATAATGTCATGCAAATGTTTCTTATAGCACATGTATCCACTTGGCTCCTTCGTAGGAACATGGCAGAACATCTTTGACAAGGCAATATTTGTGAGCATATGTTCAACATGCCATCACAGCTGCAATTAGGATATAGCCATGGTGTTGACTTCTTTTCATTTTTTATGCCATTTTGCTTGAATTCATCAGACTGTGGTAGTGAGGTTGCTCCCTTTCTTCCATTTTGATAGCAGCTGAAAAATGTTTCCAAAAATTGAGAGGATGGAAACTGCAAAGCCAAATCAAAATCCCAACACTCTTTCATTTCCTGCTCAAAGCAAGAGTCACAAGCAGTACTCCTTATCTTTTTCCACTTGTTCCAAGCAATGGTAGACAAGGCAGTAACCGAGTTGCCACACTCACTGTTTCTAGCTTGAAAAGGCACAAATCTGAAACTTGCTTGTTGTGATGGGGGCCATGGTCGAATTGGTGGTGGCCATGGTGGCATTAAATGCCCTGTTGCCCAACAAGAGTTCAATTCTGTCCATGGGGCATGCCTCAACTCACATACTCTAACTACTCCACCTAACCAAGGGGGTGGCCATGGATTCTTGTTGGAAGGCTCCATCAACAACTTGTCATCTCTAGCACATTTCATCGAACACCCGTCATGCGCCAGCATTTTAAGGAAGAAAACAGAACCCAACCTTTGCACCATGACTAGCATGGACTCCCCTGGTGCTGTGATGATGTCCAGTTCGTCAAGAAAGAGTGGGAACACAACCCCAGTCTGGACAGTACTAGTGTTGACATTTAGACCCAACTTCAAACACTTAGCGAACATCATGGAATCAGTTTCGGCATGAACAAGCAAGCTTGTTGAGGAGGCTGCAATCACTGGAATGACGTTGGATGTGTCGAGATTGAGCAGGGAGTCATCCTTGTCACGGGAATCCTTGTTGACAATGTAGGGGACGGGATCCTTGTCCTCAACGTCCCCAAGCTCAAAGGCAACCATCGGGTTAAGTACCTCGCCGATGTGACTTGAATTCACTGCCACCAAAGTGATGTTGTTGTTGTGGCATTCCATCAAACAGTTGGTGGGCACTGGAGGAGGTGGTGCCATAGGTGTCGGAGATGATGCAGCCTTGAGGATGGCGGTGGTTGCCCTGATGGCAGCAATCGTCTCCTCGGAAGCCTTGCTCCTACAAGCCTCTATCTCCTCCAGCTTCTGAAAAATTTGATTGAGCTTGTCCTCATGCCGGCGCTTGGCCTCCATTTGTTCAAACTTCTCCAATATCCGATCCAAAGCTTCATCTAGCCATTTCTCCTCTTTATTCATGGTGGAATTGATGGGAACGGGCTTAGATATCCTCTGATCTTCCTTGGACAACCCAGGTTGGCTTGGCATTCCATCGAACAGTTGGTGGGCGCTGCTTGGATGAAAACCTTCCCAACCCAATTCTTGCTCCATCTTGCATGGCTGCCTCCCCAACACCTCCAT
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| CDS seq | ATGGAGGTGTTGGGGAGGCAGCCATGCAAGATGGAGCAAGAATTGGGTTGGGAAGGTTTTCATCCAAGCAGCGCCCACCAACTGTTCGATGGAATGCCAAGCCAACCTGGGTTGTCCAAGGAAGATCAGAGGATATCTAAGCCCGTTCCCATCAATTCCACCATGAATAAAGAGGAGAAATGGCTAGATGAAGCTTTGGATCGGATATTGGAGAAGTTTGAACAAATGGAGGCCAAGCGCCGGCATGAGGACAAGCTCAATCAAATTTTTCAGAAGCTGGAGGAGATAGAGGCTTGTAGGAGCAAGGCTTCCGAGGAGACGATTGCTGCCATCAGGGCAACCACCGCCATCCTCAAGGCTGCATCATCTCCGACACCTATGGCACCACCTCCTCCAGTGCCCACCAACTGTTTGATGGAATGCCACAACAACAACATCACTTTGGTGGCAGTGAATTCAAGTCACATCGGCGAGGTACTTAACCCGATGGTTGCCTTTGAGCTTGGGGACGTTGAGGACAAGGATCCCGTCCCCTACATTGTCAACAAGGATTCCCGTGACAAGGATGACTCCCTGCTCAATCTCGACACATCCAACGTCATTCCAGTGATTGCAGCCTCCTCAACAAGCTTGCTTGTTCATGCCGAAACTGATTCCATGATGTTCGCTAAGTGTTTGAAGTTGGGTCTAAATGTCAACACTAGTACTGTCCAGACTGGGGTTGTGTTCCCACTCTTTCTTGACGAACTGGACATCATCACAGCACCAGGGGAGTCCATGCTAGTCATGGTGCAAAGGTTGGGTTCTGTTTTCTTCCTTAAAATGCTGGCGCATGACGGGTGTTCGATGAAATGTGCTAGAGATGACAAGTTGTTGATGGAGCCTTCCAACAAGAATCCATGGCCACCCCCTTGGTTAGGTGGAGTAGTTAGAGTATATGAGCTAAATTTTGGTATGAAAAGGGGTCCATCTAAAATGCATTTTACTGTGTTGGAAGTGCGAATATTTGGGGAGCTTGGTGCTGGTGAGGTTATCTTCTACATGCTTGGGTTTACTTGCCTGCTCTCTGTTGTGCTCATTCCAGTAGCATGCTGA
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| Protein seq | MEVLGRQPCKMEQELGWEGFHPSSAHQLFDGMPSQPGLSKEDQRISKPVPINSTMNKEEKWLDEALDRILEKFEQMEAKRRHEDKLNQIFQKLEEIEACRSKASEETIAAIRATTAILKAASSPTPMAPPPPVPTNCLMECHNNNITLVAVNSSHIGEVLNPMVAFELGDVEDKDPVPYIVNKDSRDKDDSLLNLDTSNVIPVIAASSTSLLVHAETDSMMFAKCLKLGLNVNTSTVQTGVVFPLFLDELDIITAPGESMLVMVQRLGSVFFLKMLAHDGCSMKCARDDKLLMEPSNKNPWPPPWLGGVVRVYELNFGMKRGPSKMHFTVLEVRIFGELGAGEVIFYMLGFTCLLSVVLIPVAC |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_02g0027850 | OsKYG_02g0027850.01 | Chr02 | 28680274 | 28682095 | - | NAM | ||
| CDS seq | ATGGAGGTGTTGGGGAGGCAGCCATGCAAGATGGAGCAAGAATTGGGTTGGGAAGGTTTTCATCCAAGCAGCGCCCACCAACTGTTCGATGGAATGCCAAGCCAACCTGGGTTGTCCAAGGAAGATCAGAGGATATCTAAGCCCGTTCCCATCAATTCCACCATGAATAAAGAGGAGAAATGGCTAGATGAAGCTTTGGATCGGATATTGGAGAAGTTTGAACAAATGGAGGCCAAGCGCCGGCATGAGGACAAGCTCAATCAAATTTTTCAGAAGCTGGAGGAGATAGAGGCTTGTAGGAGCAAGGCTTCCGAGGAGACGATTGCTGCCATCAGGGCAACCACCGCCATCCTCAAGGCTGCATCATCTCCGACACCTATGGCACCACCTCCTCCAGTGCCCACCAACTGTTTGATGGAATGCCACAACAACAACATCACTTTGGTGGCAGTGAATTCAAGTCACATCGGCGAGGTACTTAACCCGATGGTTGCCTTTGAGCTTGGGGACGTTGAGGACAAGGATCCCGTCCCCTACATTGTCAACAAGGATTCCCGTGACAAGGATGACTCCCTGCTCAATCTCGACACATCCAACGTCATTCCAGTGATTGCAGCCTCCTCAACAAGCTTGCTTGTTCATGCCGAAACTGATTCCATGATGTTCGCTAAGTGTTTGAAGTTGGGTCTAAATGTCAACACTAGTACTGTCCAGACTGGGGTTGTGTTCCCACTCTTTCTTGACGAACTGGACATCATCACAGCACCAGGGGAGTCCATGCTAGTCATGGTGCAAAGGTTGGGTTCTGTTTTCTTCCTTAAAATGCTGGCGCATGACGGGTGTTCGATGAAATGTGCTAGAGATGACAAGTTGTTGATGGAGCCTTCCAACAAGAATCCATGGCCACCCCCTTGGTTAGGTGGAGTAGTTAGAGTATATGAGCTAAATTTTGGTATGAAAAGGGGTCCATCTAAAATGCATTTTACTGTGTTGGAAGTGCGAATATTTGGGGAGCTTGGTGCTGGTGAGGTTATCTTCTACATGCTTGGGTTTACTTGCCTGCTCTCTGTTGTGCTCATTCCAGTAGCATGCTGA
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| Protein seq | MEVLGRQPCKMEQELGWEGFHPSSAHQLFDGMPSQPGLSKEDQRISKPVPINSTMNKEEKWLDEALDRILEKFEQMEAKRRHEDKLNQIFQKLEEIEACRSKASEETIAAIRATTAILKAASSPTPMAPPPPVPTNCLMECHNNNITLVAVNSSHIGEVLNPMVAFELGDVEDKDPVPYIVNKDSRDKDDSLLNLDTSNVIPVIAASSTSLLVHAETDSMMFAKCLKLGLNVNTSTVQTGVVFPLFLDELDIITAPGESMLVMVQRLGSVFFLKMLAHDGCSMKCARDDKLLMEPSNKNPWPPPWLGGVVRVYELNFGMKRGPSKMHFTVLEVRIFGELGAGEVIFYMLGFTCLLSVVLIPVAC
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g25600 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0004410 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0012390 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0012210 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0012130 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0428900 | SBH | 0.783671 | 1.4138285 | 0.6814885 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0004360 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0038100 | SBH | 1.2053295 | 2.6397415 | 5.3772445 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0004690 | SBH | 0.114629 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0005010 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0004630 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0004570 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0004900 | SBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G004400 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0004350 | SBH | 0.0 | 0.0 | 0.0 |
