Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_11g0017230 | OGI:11060270 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr11:22420704-22421021 | ||||||||
| Gene Symbol | OsLTPx3, OsLtpY.3 | ||||||||||
| DNA seq | ATGGCCATTTTCCTGTGTAGGAAGTTGACTCGATTACTACCAGGTCAAGGTCAACCGGTGGCGAAAGAGGAGTTTTTTCTACTAAAAAAGAACACTCTGCGCAGCTCTGCTTTTGCTCAAGTAGTTCGAGTTGCTGAGAGAGAGACGCCGATGCGGACTCCGACGGCGGCGATCACCGTGGTGCTTCCGGCTGTGGCGGTGGTGGTGATGGCGAGCTTTTTGGCGGCCGCCGGCGAGGTGGAGCTGGCGCTGGATCAGGCGGGTAGTCCGACCAGTGACCCCCCGACTTGCGCGAGGCTTCGTGCGCGCGGTACATGA |
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| CDS seq | ATGGCCATTTTCCTGTGTAGGAAGTTGACTCGATTACTACCAGGTCAAGGTCAACCGGTGGCGAAAGAGGAGTTTTTTCTACTAAAAAAGAACACTCTGCGCAGCTCTGCTTTTGCTCAAGTAGTTCGAGTTGCTGAGAGAGAGACGCCGATGCGGACTCCGACGGCGGCGATCACCGTGGTGCTTCCGGCTGTGGCGGTGGTGGTGATGGCGAGCTTTTTGGCGGCCGCCGGCGAGGTGGAGCTGGCGCTGGATCAGGCGGGTAGTCCGACCAGTGACCCCCCGACTTGCGCGAGGCTTCGTGCGCGCGGTACATGA |
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| Protein seq | MAIFLCRKLTRLLPGQGQPVAKEEFFLLKKNTLRSSAFAQVVRVAERETPMRTPTAAITVVLPAVAVVVMASFLAAAGEVELALDQAGSPTSDPPTCARLRARGT |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_11g0017230 | OsIR64_11g0017230.01 | Chr11 | 22420704 | 22421021 | + | NAM | ||
| CDS seq | ATGGCCATTTTCCTGTGTAGGAAGTTGACTCGATTACTACCAGGTCAAGGTCAACCGGTGGCGAAAGAGGAGTTTTTTCTACTAAAAAAGAACACTCTGCGCAGCTCTGCTTTTGCTCAAGTAGTTCGAGTTGCTGAGAGAGAGACGCCGATGCGGACTCCGACGGCGGCGATCACCGTGGTGCTTCCGGCTGTGGCGGTGGTGGTGATGGCGAGCTTTTTGGCGGCCGCCGGCGAGGTGGAGCTGGCGCTGGATCAGGCGGGTAGTCCGACCAGTGACCCCCCGACTTGCGCGAGGCTTCGTGCGCGCGGTACATGA
More
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| Protein seq | MAIFLCRKLTRLLPGQGQPVAKEEFFLLKKNTLRSSAFAQVVRVAERETPMRTPTAAITVVLPAVAVVVMASFLAAAGEVELALDQAGSPTSDPPTCARLRARGT |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g34660 | SBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0016900 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0016400 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0327700 | RBH | 0.050219 | 0.607444 | 0.017158 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0016480 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0016700 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G016600 | RBH | 0.0 | 0.0 | 0.502506 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0016940 | RBH | 0.0 | 0.0 | 0.0 |
