Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_11g0016820 | OGI:11059140 | 12/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr11:22025307-22025591 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTAGACAGTGTCGTCATTGGTGTTGAGGACCACTGTCGAACACCTTGTAGGCATAACCTTCAAAGGGTTTGAGGTGCCAATGCAGGTGGTGTGGCCATTGTCGTCGATACCTATCAACTCCACAAAGGCTATAACAGTGGTGGCGCACCTTTCCACTACAACAACAGTGAGGTCGGTCATAACGTTGAAGCTGGAGCAATTTGTCGAACAGTTGGTGAGAGTCTTCTTGGGATGTTCAAGATTGTCAATGTAGGCATCGCTGGTTGCGTCTTCAGCAGGCACCAT |
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| CDS seq | ATGGTGCCTGCTGAAGACGCAACCAGCGATGCCTACATTGACAATCTTGAACATCCCAAGAAGACTCTCACCAACTGTTCGACAAATTGCTCCAGCTTCAACGTTATGACCGACCTCACTGTTGTTGTAGTGGAAAGGTGCGCCACCACTGTTATAGCCTTTGTGGAGTTGATAGGTATCGACGACAATGGCCACACCACCTGCATTGGCACCTCAAACCCTTTGAAGGTTATGCCTACAAGGTGTTCGACAGTGGTCCTCAACACCAATGACGACACTGTCTAG |
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| Protein seq | MVPAEDATSDAYIDNLEHPKKTLTNCSTNCSSFNVMTDLTVVVVERCATTVIAFVELIGIDDNGHTTCIGTSNPLKVMPTRCSTVVLNTNDDTV |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_11g0016820 | OsIR64_11g0016820.01 | Chr11 | 22025307 | 22025591 | - | NAM | ||
| CDS seq | ATGGTGCCTGCTGAAGACGCAACCAGCGATGCCTACATTGACAATCTTGAACATCCCAAGAAGACTCTCACCAACTGTTCGACAAATTGCTCCAGCTTCAACGTTATGACCGACCTCACTGTTGTTGTAGTGGAAAGGTGCGCCACCACTGTTATAGCCTTTGTGGAGTTGATAGGTATCGACGACAATGGCCACACCACCTGCATTGGCACCTCAAACCCTTTGAAGGTTATGCCTACAAGGTGTTCGACAGTGGTCCTCAACACCAATGACGACACTGTCTAG
More
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| Protein seq | MVPAEDATSDAYIDNLEHPKKTLTNCSTNCSSFNVMTDLTVVVVERCATTVIAFVELIGIDDNGHTTCIGTSNPLKVMPTRCSTVVLNTNDDTV |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g36820 | SBH | 0.0 | 0.147629 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0016580 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0018350 | SBH | 0.000000 | 0.0 | 0.462860 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0016500 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0015910 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0016450 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0312700 | RBH | 0.202788 | 0.174921 | 0.1749825 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0321600 | RBH | 0.0493515 | 0.148644 | 1.22755 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0016790 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0016630 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0016310 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0016090 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0016320 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G016190 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
