Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_11g0016550 | OGI:11058350 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr11:21673098-21675975 | ||||||||
| Gene Symbol | OsFbox608, Os_F0043 | ||||||||||
| DNA seq | CCATTTTTTTAATTTCATATACCTGTAATGCAGATGTTCTGATTTTTATTTCAGTGGAAAAAAAATGAGAGCCGTGGTTCATGGTAAGGCGACAAAGAGTGAAGGCTGTGCCAGGATCAATCTGAAGAAGAGGAGATCCCAGACTTTTCGACTTCACCGCCTACCTCCTGTAAGTAAAGCCACTTACAGAGTTACAGTAAGCTTGTTACAGTGGGACTATATTCTGCATACTCACTGATTTATCGCTAGCCTCTATCTCTTGAATATGTGTGCATAGTGCGTGTATGCGTGCATGTACACCTTTTAGTGTAATTGCAAAAAATATATCGTCTGTTTGATAGAGCTCCAACTCCTAAATTTAACTACGGGAGTTGGGTCTAGAGTAGAGTTATGGAGCAGACTAATCCCAGTTCCACATCTCTAGTTCATTTTATGAGAGCGTTACACCCAACTCCGTTCCTATTTTAGGTGGAGCTGAAATTATTTGGTGGGCTCCAGCTCCAAGAGAAGTGGAGTTGGAGCTGGTGCTATGCCAAACAGTCCCATATTGTGCTAACTCTAGAGGCTTAAAGCATGTTGGTCAAGAAATGAGTTATTTTCCTTTAGAAAGACAAAACTCCAACTTATTTGTGTCATGTTTCTGCAGGATGTTTTGCGTGTCATACTATCACAATTGTCATTCAAAGAAGCTGCCCGTACAAGCATTGTGTCCAGGAAGTGGAAACGGCTTTGGAGATGCTACCCAAAGCTGGTCTTGACCGGAGATATGATGCTTGGCAGCAGCAGCAATGCTGCAGGAGACCACCCAACATGGAATAAAACAACATTTATCAGGCGTGCCAACAGTGTTGTGCGGCAGCTATCATCGTCGTCAGCTACGCTCAATAAGTTCATAGTGAAATTTCCCCTCCTCCAAAGCGACGCAGATCACATCGACAGATGGGTTAGCTTGTCAGCTGCATCAAGAGCAAGGCGCATTGTTCTTGATCTGTGCCCAGAACTCGAGAAGTTCGGTGACAAAGACCAAATGTACAGCTTCCCTCTTCATCTTTTCAGTGTTGGTGGTAATTCTTGCGTCAAGTCTCTCTGCCTAGGTTTTGTCTCCCTGAATCTGCTTCATCAGCTGTCTCCTGCTGGTAATACCAATCGCTTGACAATCCTGAAGAAGCTTACCCTGCACAAGGTGTCCATTGCTGGTGATCTTCAGAGCTTGCTCCTGGAGTGCGATGCTCTCGAGTGGTTAAGCCTCACCTTCTGCTCCCTGCAACACCGTGATCTGGTCGTCCAACACCAGCAGCCACTGCAGCGTTTGCGGCATCTGCGGGTGCTGCACTGCAGGCTGCAGAAGCTGGAGTTGCAGGCTCCGAATCTGACCGAGTTTGAGTTCGCTAACCACCAGGTGCCTTTGGTGCTTGGTGATTGTGTCAACTTGTCGATGGCGTCGGTTGGGCTGTTGCTGCCGTCGGATGGCTTTGACTACGCCTGCACCAAGCTTCCGGTTGCTCTTCCTCATGTTTGTGACCGTCTCACACTAAGCATGGCGATCAGAACTGAGGTACGTATGTGCAGGGTTTAACTTATCGGTTTGATCGATTGTATCCGAGGTCACCGATAGACCGAAGTTTCGGTTCGTAATTTCCAAAACTTTGAATAAAATTTAGCTAAATTCGAACAAATATTACTGAAACTCACAAAAAATTAAAAACTTTCAGCCGAAATGATATAGTATCGGAGGGGGGTGTCTGAAATGACCGAAATTTAATTTCATGGTACAAATACTACCTTTATAATTATAAGAACCTAATATTGGATAGGACATATCTTAATATTACAAATCTAGTTAGGAGACTATATCCGAATTTATAGCACTTGTCTTGTCCCATACTAGATTACTATATCATGGGACGGAGGGATTGAACAGTTGACAACTTTTATGGTGATTTTTACTGGTACAGTAGAAACAATATGGACTGTCGATTTGCGATAATATATTGTTTTACGATCTCCTTGGTTTCTGAACATTTGTGCGTTGTGGTTCCAGGCACCGTTGTTGATGAAAGGTGGCTCAGTGTTTGCCAATCTGAGGCATCTGATCCTGAACGTAGATATTGACGGATGCCCAAAAGCTAGCACTGGGGTACTTCGACTGGCATGCCTTCTAGAGCTGGCACCTGTTCTTGAAGAGTTGGAACTTCATGTAAGTCACTGACTTATTGACCCTTAATTGCTGCGATTCTGCATCATCTAAAAACTCTCCTTCATTGTCATCATCATCTCTCTCCATGAGTGGGTAGATATAAGCATCATCTTAGCATTTGTAGTTTGTGAATTTTGTGTCATTTACAGTTGTTCTGTACAAAAGGTGTACTGATGCGTAGATTCCCTCTCGATTTTTTAGCACGCTTTTCATTGGTCTAAAATATCAGATAAAAATCAAATTTTCTATAACTTAATTAATTATACGCTATTAGCTTTGTTATTTTCTGTGCCCTAACTTTATCTTCATCTTCAGTAGAAACAAACACCGATTTCCGCGCAATTTTCACACTAGTTTGAAATTGAATGCATGCAGATGTACTGTGCGAATACGCCATTCTACACCTCCGATTTGGACGCGGCGGCGACATCGCCGGCGGCTCGTCTCCACGAGCGGCTCAGGACCGTCTACATGACCGGGTTCTACGGCATCCGTGGCCAGCTGGAGCTGGCGCACCGGATACTCCGGAGCACGGTCGCTCTCGACCGTCTGATCATCGATCCGACGCGCAAGGTTGACCACAATTTCAGAAACCAGGCCTACGCAGGGATGGGAAGGACCATGGCTACACTCTGTATTAACAAAGCCCAGTTCCCTGGCACTGTGATTACTATTCTGTAG
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| CDS seq | ATGAGAGCCGTGGTTCATGGTAAGGCGACAAAGAGTGAAGGCTGTGCCAGGATCAATCTGAAGAAGAGGAGATCCCAGACTTTTCGACTTCACCGCCTACCTCCTGATGTTTTGCGTGTCATACTATCACAATTGTCATTCAAAGAAGCTGCCCGTACAAGCATTGTGTCCAGGAAGTGGAAACGGCTTTGGAGATGCTACCCAAAGCTGGTCTTGACCGGAGATATGATGCTTGGCAGCAGCAGCAATGCTGCAGGAGACCACCCAACATGGAATAAAACAACATTTATCAGGCGTGCCAACAGTGTTGTGCGGCAGCTATCATCGTCGTCAGCTACGCTCAATAAGTTCATAGTGAAATTTCCCCTCCTCCAAAGCGACGCAGATCACATCGACAGATGGGTTAGCTTGTCAGCTGCATCAAGAGCAAGGCGCATTGTTCTTGATCTGTGCCCAGAACTCGAGAAGTTCGGTGACAAAGACCAAATGTACAGCTTCCCTCTTCATCTTTTCAGTGTTGGTGGTAATTCTTGCGTCAAGTCTCTCTGCCTAGGTTTTGTCTCCCTGAATCTGCTTCATCAGCTGTCTCCTGCTGGTAATACCAATCGCTTGACAATCCTGAAGAAGCTTACCCTGCACAAGGTGTCCATTGCTGGTGATCTTCAGAGCTTGCTCCTGGAGTGCGATGCTCTCGAGTGGTTAAGCCTCACCTTCTGCTCCCTGCAACACCGTGATCTGGTCGTCCAACACCAGCAGCCACTGCAGCGTTTGCGGCATCTGCGGGTGCTGCACTGCAGGCTGCAGAAGCTGGAGTTGCAGGCTCCGAATCTGACCGAGTTTGAGTTCGCTAACCACCAGGTGCCTTTGGTGCTTGGTGATTGTGTCAACTTGTCGATGGCGTCGGTTGGGCTGTTGCTGCCGTCGGATGGCTTTGACTACGCCTGCACCAAGCTTCCGGCACCGTTGTTGATGAAAGGTGGCTCAGTGTTTGCCAATCTGAGGCATCTGATCCTGAACGTAGATATTGACGGATGCCCAAAAGCTAGCACTGGGGTACTTCGACTGGCATGCCTTCTAGAGCTGGCACCTGTTCTTGAAGAGTTGGAACTTCATCGGCTCAGGACCGTCTACATGACCGGGTTCTACGGCATCCGTGGCCAGCTGGAGCTGGCGCACCGGATACTCCGGAGCACGGTCGCTCTCGACCGTCTGATCATCGATCCGACGCGCAAGGTTGACCACAATTTCAGAAACCAGGCCTACGCAGGGATGGGAAGGACCATGGCTACACTCTGTATTAACAAAGCCCAGTTCCCTGGCACTGTGATTACTATTCTGTAG
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| Protein seq | MRAVVHGKATKSEGCARINLKKRRSQTFRLHRLPPDVLRVILSQLSFKEAARTSIVSRKWKRLWRCYPKLVLTGDMMLGSSSNAAGDHPTWNKTTFIRRANSVVRQLSSSSATLNKFIVKFPLLQSDADHIDRWVSLSAASRARRIVLDLCPELEKFGDKDQMYSFPLHLFSVGGNSCVKSLCLGFVSLNLLHQLSPAGNTNRLTILKKLTLHKVSIAGDLQSLLLECDALEWLSLTFCSLQHRDLVVQHQQPLQRLRHLRVLHCRLQKLELQAPNLTEFEFANHQVPLVLGDCVNLSMASVGLLLPSDGFDYACTKLPAPLLMKGGSVFANLRHLILNVDIDGCPKASTGVLRLACLLELAPVLEELELHRLRTVYMTGFYGIRGQLELAHRILRSTVALDRLIIDPTRKVDHNFRNQAYAGMGRTMATLCINKAQFPGTVITIL |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_11g0016550 | OsIR64_11g0016550.01 | Chr11 | 21673098 | 21675975 | + | NAM | ||
| CDS seq | ATGAGAGCCGTGGTTCATGGTAAGGCGACAAAGAGTGAAGGCTGTGCCAGGATCAATCTGAAGAAGAGGAGATCCCAGACTTTTCGACTTCACCGCCTACCTCCTGATGTTTTGCGTGTCATACTATCACAATTGTCATTCAAAGAAGCTGCCCGTACAAGCATTGTGTCCAGGAAGTGGAAACGGCTTTGGAGATGCTACCCAAAGCTGGTCTTGACCGGAGATATGATGCTTGGCAGCAGCAGCAATGCTGCAGGAGACCACCCAACATGGAATAAAACAACATTTATCAGGCGTGCCAACAGTGTTGTGCGGCAGCTATCATCGTCGTCAGCTACGCTCAATAAGTTCATAGTGAAATTTCCCCTCCTCCAAAGCGACGCAGATCACATCGACAGATGGGTTAGCTTGTCAGCTGCATCAAGAGCAAGGCGCATTGTTCTTGATCTGTGCCCAGAACTCGAGAAGTTCGGTGACAAAGACCAAATGTACAGCTTCCCTCTTCATCTTTTCAGTGTTGGTGGTAATTCTTGCGTCAAGTCTCTCTGCCTAGGTTTTGTCTCCCTGAATCTGCTTCATCAGCTGTCTCCTGCTGGTAATACCAATCGCTTGACAATCCTGAAGAAGCTTACCCTGCACAAGGTGTCCATTGCTGGTGATCTTCAGAGCTTGCTCCTGGAGTGCGATGCTCTCGAGTGGTTAAGCCTCACCTTCTGCTCCCTGCAACACCGTGATCTGGTCGTCCAACACCAGCAGCCACTGCAGCGTTTGCGGCATCTGCGGGTGCTGCACTGCAGGCTGCAGAAGCTGGAGTTGCAGGCTCCGAATCTGACCGAGTTTGAGTTCGCTAACCACCAGGTGCCTTTGGTGCTTGGTGATTGTGTCAACTTGTCGATGGCGTCGGTTGGGCTGTTGCTGCCGTCGGATGGCTTTGACTACGCCTGCACCAAGCTTCCGGCACCGTTGTTGATGAAAGGTGGCTCAGTGTTTGCCAATCTGAGGCATCTGATCCTGAACGTAGATATTGACGGATGCCCAAAAGCTAGCACTGGGGTACTTCGACTGGCATGCCTTCTAGAGCTGGCACCTGTTCTTGAAGAGTTGGAACTTCATCGGCTCAGGACCGTCTACATGACCGGGTTCTACGGCATCCGTGGCCAGCTGGAGCTGGCGCACCGGATACTCCGGAGCACGGTCGCTCTCGACCGTCTGATCATCGATCCGACGCGCAAGGTTGACCACAATTTCAGAAACCAGGCCTACGCAGGGATGGGAAGGACCATGGCTACACTCTGTATTAACAAAGCCCAGTTCCCTGGCACTGTGATTACTATTCTGTAG
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| Protein seq | MRAVVHGKATKSEGCARINLKKRRSQTFRLHRLPPDVLRVILSQLSFKEAARTSIVSRKWKRLWRCYPKLVLTGDMMLGSSSNAAGDHPTWNKTTFIRRANSVVRQLSSSSATLNKFIVKFPLLQSDADHIDRWVSLSAASRARRIVLDLCPELEKFGDKDQMYSFPLHLFSVGGNSCVKSLCLGFVSLNLLHQLSPAGNTNRLTILKKLTLHKVSIAGDLQSLLLECDALEWLSLTFCSLQHRDLVVQHQQPLQRLRHLRVLHCRLQKLELQAPNLTEFEFANHQVPLVLGDCVNLSMASVGLLLPSDGFDYACTKLPAPLLMKGGSVFANLRHLILNVDIDGCPKASTGVLRLACLLELAPVLEELELHRLRTVYMTGFYGIRGQLELAHRILRSTVALDRLIIDPTRKVDHNFRNQAYAGMGRTMATLCINKAQFPGTVITIL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.315552 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0539700 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g33320 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0539700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0016390 | RBH | 0.385050 | 3.737505 | 4.086955 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0016340 | RBH | 0.118620 | 0.000000 | 1.103250 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0016310 | RBH | 1.093111 | 4.201546 | 8.337031 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0015860 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0016300 | RBH | 2.633291 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0309600 | RBH | 2.0048815 | 0.892364 | 0.244962 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0016540 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0317900 | RBH | 4.0763575 | 7.5273495 | 1.4635805 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0016500 | RBH | 0.306519 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0016480 | RBH | 0.932541 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0016100 | RBH | 5.900575 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0015880 | RBH | 0.103439 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0016190 | RBH | 0.305403 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G015990 | RBH | 0.434746 | 0.000000 | 0.255354 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0016430 | RBH | 4.466287 | 0.0 | 0.630960 |
