Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsIR64_10g0018460		OGI:10064170 \| 16/16			IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)			Chr10:23248832-23254079		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		SPK, CDPK 1, CDPK1, CDPK23, OsCDPK23, OsCPK23
DNA seq		AATCACCAGTTCACCACTTCACCATTGCCTTCCAGCAACCCAAAAAAAAAAAAAAAGCTTACCAAATGGCGTGTATGAGTGTATCCTCAATTCCTCACCATGACATCCCAGCCGCTCATCAACGTTTCCATCATCCGCGATCGACAAATCCTGGCCGTTGATGTGTCCAGCCCCCTCCCCCACGAGGCCCTGCTGACGTGGCGCGACCAACCACCCTCTCCTCACCCGGCCGGGGGTATAAAAGGGGGGTCTCCTGCCACCTCCGTCTCCTCAGTGCTCTCCTCTCCATTTTTTTCCTCCTATCGATTTTGCAATTTAGTCCCTAGGGAGGCAGGGAATCCGGCTCCGGTCCCTGTGCCGCTCCCCCCGGCTCTCCTTGCCTCCCTTGCTCCTCCGATCGAGGCTGAAGCGGCTTCAGGTGAGCCCCGTCCTGGCGATTCTTGATTCGCTTGGATATACATTTTGTAGCGAGTTCATCGTCTCGATTTAGATTTCGTTTGTTTTTGGCTGGCCATGGCTTTGGGGTTGGGTGGATTGGAGGAGGTGAAGTGAAGTGGTTCTTCCAGGAGGAGAATTTTGGTGGAGATTTTGGTGCTGGGAGCCTTTGGGTTGGGGATTGTGAGCTGTAGGAAGGTTTAAAGGGAGATGCCTTTGGAGGAAACTGTACTGAATTTGGTGAGGGTGTAGGATGCATAGAGCTATAGAAGGTTGGGGAATTTGCTGCTCGTAGGAGCTTAGGAGAGCTCGAAACTTTGGATAATATCACAATTGTTTAGGTGATTAGTTACTTGTCGATTGGTTGTGTTTTGATAACATAGAGTCTGGTTGTTGGGGTGTCCAGTTTTAGGCTAAGGTCTTGCTCTACTCTTACTGTATTACTACAATAAGTACAAGTTCTGAATGAGTACTAAATTAAGCTGGAGTTCTCCTTTTTAGCAGACTTTTCCGGATCCCTGTGAAGTGTTGTAGATATCTAACTTGCATATTGTATCATGCAGGATATACATTTTTGTGGGAATGGGGAATTCTTGCCAAAATGGAACCTATGGGAACAATTACCAGAACAGCAACCGGTTTCAGAATGACCGTTTTGCTTCTCGGTACGTTGATGGGAATGATACTGAGGATTGCTACTCGGGCTCGTCAAGGGCCAGCTTAGCGGGTGCTCTGCGGCAAGGGCTGAACCTAAAGTCCCCTGTCCTTGGATACAAGACTCCAAATGTAAGGGAGCTCTATACTCTTGGCCGGGAGCTTGGACAGGGACAGTTCGGGAAAACATACCTCTGCACTGAGATTAGCACAGGGTGTCAATATGCATGCAAGACTATCTTAAAGAGTAATCTCCGATGTGTGTCAGATATCGAGGACGTGCGCCGTGAAATCCAGATAATGCACCATCTTTCGGGCCAGAAGAATATAGTGACAATCAAGGACACATATGAGGATGAGCAGGCCGTGCACATCGTCATGGAGCTCTGTGCAGGTGGTGAGCTCTTCAGCAAGATTCAGAAGCGAGGTCATTACAGTGAACGGAAGGCTGCAGAGCTTATAAAAATTATAGTTGGCATCATAGAAACATGCCATTCACATGGAGTGATGCACCGGGATCTCAAGCCAGAAAATTTCCTCTTACTGGACGCAGACGATGAATTCTCGGTTAAAGCAATTGACTTTGGTCTATCTGTGTTCTTCAGACCAGGTATTATGTCAGAGTCAATAAGTATATTCAATGGGCTTGTTTCTATATTTAGTCATGTTAGCAATCAGCTGTTTGATATCCTGCTAACTTATTTAGTTATGATGTAAATAGTTCCATACAAAGAGCGAGTAAGGTGAAAGTATGGCAGAGTAGAAAAACAATCCCAATCAAATTTTCTACCAGTAATTTAGTCTTGGAAACATTAGTTTGTTGTAGTTCCTTATAATGCAGCTTTAACAAAAACAAATAATAATGTAATTGTTTACTCTTGCATACAATCTATGCTTCCTTTGGCTGTTTTTCCTAACTGATTCATATCTATCCACAAATCAGGTCAGGTTTTCAGAGAGGTAGTGGGAAGTCCATATTATATTGCTCCAGAGGTATTGGAGAAGCGTTATGGACCAGAGGCTGATATATGGACTGCTGGAGTGATTCTCTATGTATTGCTGACTGGTGTTCCTCCATTTTGGGCAGGTGATTGATTTGACAAGATTTGCAAAATTCTGCTTCATTGGTTTTAGTGAATTGCTAAAAGGACTTCTTTCACTCTTACTAGATACACAAAGCGGGATATATGAAAAAGTACTGGATGGACGTATTGATTTTAAATCAAACCGGTGGCCCAGGATATCTGACAGTGCAAAGGATCTTATAAAAAAGATGCTCTGCCCTTATCCATCAGAGCGTTTGAAAGCCCATGAAGTGCTAAGTTAGTATATTTAATATTTCGTTCATTAGTATCACTTTTATTCAATTTAGTACCTCGTAGAATAATTTTGGACCAATGTTTTTGTTATCCACGAAATTTCATAAGTTCCGAAACTATAGTAAGATCTCAAGAGTAAACAAAGAGCAGTTTCTTACAGTTTTTCTATTATATGTTCAGAGCATCCATGGATATGTGATAATGGAGTGGCTACTGAACGAGCTCTGGATCCAAGTGTACTTCCTCGTCTCAAGCAATTTTCTGCAATGAATAGGTTAAAGAAATTGTCTCTCCAGGTATATTTTTTTTTACCGTTTCATCTTGTCATAGAAAAGTCATTTATTTGTTTCCATTTTGTCATCATGGTGAAGCATCATTAAGTGCTTTCACAATTTCCAGGGAAATCATTATTCTATTACTGCTGTCCTTTAATACTAAATCTAACAGAAGTGTGAACCTTTTTAAATTCCAGAAGCATAGCTACTTCTACAAGAATAAAAACAAAGCTACCTTGTGTACATCATGCCATCATGGCCAAATTGATTTGCTGCAGTTCAGATTTTTCCTCGTAGGATCTTAAAAATTTGACAGCACTGAAATTGTTTTTAAATCTGACTCAGTAATATTTTCTTCATTGGTGAATTGTTTATTGTTATCATATACGAAGATCTTTTGTCGGTATTGTACCTGTTCCAGCATTGCTTCCAAGTTGAGAGTTACAGACTTTTATGGTGCACCTAAATTTACTATTCTAAATTGACCCAGATATAATTTCATAAATTGCTATGATACAAAAGTAGGAGATGCTAGGAATCAGGATGAGATTAATTAAGGCATCAATTTTTACTTAAACTATTATGTCTATCTATTTCTCATATTTAAAAATATTACAGATTGCAGTAATCTATGTTTCTTACTTGCTGTTCATCCAGATTATTGCTGAGCGTCTTTCAGAAGAGGAGATTGTTGGGTTAAGAGAAATGTTCAAGGCTATGGACACCAAAAACAGAAGTGTGGTTACATTTGGTGAGCTTAAGGGACTGAAAAGATACAGCTCAGTGTTCAAGGATACTGAAATTAACGACTTAATGGAAGCAGTAAGTGGTCACTGTTATTGCAAAATACGATGCAAAATGTACTGTAGCACACTTAAACCATATACATGGTATCTGTAGTATATAGACTGGATATTGTTTGTCAACCTTTTGATCATGCTGCTTTTCAGAATTCTGTATTGTTTTGAATGTGTGTGAAAAGTCGGGGCCAACACATTCATGTCAAAAGATTACTTAAACCATTGGTTTAGTTGAAATGGAGTATGTCATGCATCTGTGATGAAATACTGTCTTCATTGCAGAACTGTTTTATATATTTTAACCTTTTTGAGTACTACTTCAGGCTGATGACACCACCTCCACCATCAACTGGGAAGAGTTTATTGCTGCAGCAGTGTCTCTTAATAAAATAGAACGTGAGAAACACTTGATGGCAGCCTTTACATACTTTGACAAAGATGGAAGTGGTTTTATCACAGTTGACAAGCTTCAAAAGGCTTGCATGGAACGTAACATGGAAGATACTTTCCTTGAAGAGATGATTCTGGAGGTTGATCAAAACAATGTAAGTTCTGTACTGTTTTTCAAGCTATAAGATCAGTGTGCTAGTATTAGTTATTGCTGTTCAGTAGCTAATTGTTCTACTCCTGAAGAATTTGATGGCACTGGTTATAGAATAGCAGCATGTATGTGGTAGAAGTTGGTCCTAAATGATGTTTCACTTTCAGTATTACCTTCAGCAATAGATATGAACCAATTTGGATCCTCTGCAGTGGAAGACCTGGATCCGATATGAACAACTATAATGATGTTATTTACAGGCTGTTTAAAAATGTATAGTTTAGAGGTTTCATACTTTTGCGCTTTCACCCCCAACTTATTGTCCTCTTTGTTTGAGGATAAACTGAACAGCTGAGGGAAGACTTCCCATATGTTCAAAAGGGCCTCAATTATTTGGCATATACTGTTGAATTATCATAAGATGAATACTTATATTTGCTTAGTAACATAGGAAAGCAAGTTATGTTTTTATCAGAACAGAAAAGGTGTCATTGAGATTATTTTTGCTTCCTTGCTGAACATCTCATCAGTAATTATGTTTTTCTTTTTCTTTTTTTTTGGTAAATTTTCAGGATGGTCAAATCGATTATGCTGAATTTGTCACAATGATGCAAAGCAACAACTTTGGACTTGGGTGGCAAACGGTGGAAAGCAGCCTGAATGTAGCCCTGAGGGAGGCACCCCAAGTATACTGAACTCCTGTCGCCTGGCACCCCCAAGAATTCAGTTTGTTCTCCTGAGCCTTTCATCTGTTTATCACAACACATAGTTGTGGATTTGAGAGAAGAGAGCCAAGACTAGATGGTTTATCAGTAATCACCCTATAGCAGTGGTGGAAGAAGACTCTCTTAGTACCTAATAGCATATAAATGTGTGGTCTAAAGACATCGTATATGTATGAACCTCATAAGTTCGTTCGTTCGTTCGTTTGGTTGGTTGGTTTGCTACCCTGCTATCTAATAATAATATCAATAATACCCGAAGAACCCCTCTTGGTTCTGCATATATCTCTGTGCTGGTGTTGTTAATTGTGTTTATTTTCCTGCAGTTTTTAAGTGATTTTTTTTTGTGCAAGTGATTATCTCATATCTCTTCGATGGTGAAGAGTTTTGGTGTGGTAACAGCAATCAGAAATTCAGACAGAAACCAGAACTTTTGGAACTGCAGAAGTGATATAAAGGCCAGGCGCTGAAAGTCTGAAGAATCAAAACATGACAAACCCGA More
CDS seq		ATGGGGAATTCTTGCCAAAATGGAACCTATGGGAACAATTACCAGAACAGCAACCGGTTTCAGAATGACCGTTTTGCTTCTCGGTACGTTGATGGGAATGATACTGAGGATTGCTACTCGGGCTCGTCAAGGGCCAGCTTAGCGGGTGCTCTGCGGCAAGGGCTGAACCTAAAGTCCCCTGTCCTTGGATACAAGACTCCAAATGTAAGGGAGCTCTATACTCTTGGCCGGGAGCTTGGACAGGGACAGTTCGGGAAAACATACCTCTGCACTGAGATTAGCACAGGGTGTCAATATGCATGCAAGACTATCTTAAAGAGTAATCTCCGATGTGTGTCAGATATCGAGGACGTGCGCCGTGAAATCCAGATAATGCACCATCTTTCGGGCCAGAAGAATATAGTGACAATCAAGGACACATATGAGGATGAGCAGGCCGTGCACATCGTCATGGAGCTCTGTGCAGGTGGTGAGCTCTTCAGCAAGATTCAGAAGCGAGGTCATTACAGTGAACGGAAGGCTGCAGAGCTTATAAAAATTATAGTTGGCATCATAGAAACATGCCATTCACATGGAGTGATGCACCGGGATCTCAAGCCAGAAAATTTCCTCTTACTGGACGCAGACGATGAATTCTCGGTTAAAGCAATTGACTTTGGTCTATCTGTGTTCTTCAGACCAGGTCAGGTTTTCAGAGAGGTAGTGGGAAGTCCATATTATATTGCTCCAGAGGTATTGGAGAAGCGTTATGGACCAGAGGCTGATATATGGACTGCTGGAGTGATTCTCTATGTATTGCTGACTGGTGTTCCTCCATTTTGGGCAGATACACAAAGCGGGATATATGAAAAAGTACTGGATGGACGTATTGATTTTAAATCAAACCGGTGGCCCAGGATATCTGACAGTGCAAAGGATCTTATAAAAAAGATGCTCTGCCCTTATCCATCAGAGCGTTTGAAAGCCCATGAAGTGCTAAAGCATCCATGGATATGTGATAATGGAGTGGCTACTGAACGAGCTCTGGATCCAAGTGTACTTCCTCGTCTCAAGCAATTTTCTGCAATGAATAGGTTAAAGAAATTGTCTCTCCAGATTATTGCTGAGCGTCTTTCAGAAGAGGAGATTGTTGGGTTAAGAGAAATGTTCAAGGCTATGGACACCAAAAACAGAAGTGTGGTTACATTTGGTGAGCTTAAGGGACTGAAAAGATACAGCTCAGTGTTCAAGGATACTGAAATTAACGACTTAATGGAAGCAGCTGATGACACCACCTCCACCATCAACTGGGAAGAGTTTATTGCTGCAGCAGTGTCTCTTAATAAAATAGAACGTGAGAAACACTTGATGGCAGCCTTTACATACTTTGACAAAGATGGAAGTGGTTTTATCACAGTTGACAAGCTTCAAAAGGCTTGCATGGAACGTAACATGGAAGATACTTTCCTTGAAGAGATGATTCTGGAGGTTGATCAAAACAATGATGGTCAAATCGATTATGCTGAATTTGTCACAATGATGCAAAGCAACAACTTTGGACTTGGGTGGCAAACGGTGGAAAGCAGCCTGAATGTAGCCCTGAGGGAGGCACCCCAAGTATACTGA More
Protein seq		MGNSCQNGTYGNNYQNSNRFQNDRFASRYVDGNDTEDCYSGSSRASLAGALRQGLNLKSPVLGYKTPNVRELYTLGRELGQGQFGKTYLCTEISTGCQYACKTILKSNLRCVSDIEDVRREIQIMHHLSGQKNIVTIKDTYEDEQAVHIVMELCAGGELFSKIQKRGHYSERKAAELIKIIVGIIETCHSHGVMHRDLKPENFLLLDADDEFSVKAIDFGLSVFFRPGQVFREVVGSPYYIAPEVLEKRYGPEADIWTAGVILYVLLTGVPPFWADTQSGIYEKVLDGRIDFKSNRWPRISDSAKDLIKKMLCPYPSERLKAHEVLKHPWICDNGVATERALDPSVLPRLKQFSAMNRLKKLSLQIIAERLSEEEIVGLREMFKAMDTKNRSVVTFGELKGLKRYSSVFKDTEINDLMEAADDTTSTINWEEFIAAAVSLNKIEREKHLMAAFTYFDKDGSGFITVDKLQKACMERNMEDTFLEEMILEVDQNNDGQIDYAEFVTMMQSNNFGLGWQTVESSLNVALREAPQVY
Function		Calcium-dependent protein kinase 23 [UniProtKB/Swiss-Prot:P53682]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsIR64_10g0018460	OsIR64_10g0018460.01	Chr10	23248832	23254079	+	NAM
CDS seq	ATGGGGAATTCTTGCCAAAATGGAACCTATGGGAACAATTACCAGAACAGCAACCGGTTTCAGAATGACCGTTTTGCTTCTCGGTACGTTGATGGGAATGATACTGAGGATTGCTACTCGGGCTCGTCAAGGGCCAGCTTAGCGGGTGCTCTGCGGCAAGGGCTGAACCTAAAGTCCCCTGTCCTTGGATACAAGACTCCAAATGTAAGGGAGCTCTATACTCTTGGCCGGGAGCTTGGACAGGGACAGTTCGGGAAAACATACCTCTGCACTGAGATTAGCACAGGGTGTCAATATGCATGCAAGACTATCTTAAAGAGTAATCTCCGATGTGTGTCAGATATCGAGGACGTGCGCCGTGAAATCCAGATAATGCACCATCTTTCGGGCCAGAAGAATATAGTGACAATCAAGGACACATATGAGGATGAGCAGGCCGTGCACATCGTCATGGAGCTCTGTGCAGGTGGTGAGCTCTTCAGCAAGATTCAGAAGCGAGGTCATTACAGTGAACGGAAGGCTGCAGAGCTTATAAAAATTATAGTTGGCATCATAGAAACATGCCATTCACATGGAGTGATGCACCGGGATCTCAAGCCAGAAAATTTCCTCTTACTGGACGCAGACGATGAATTCTCGGTTAAAGCAATTGACTTTGGTCTATCTGTGTTCTTCAGACCAGGTCAGGTTTTCAGAGAGGTAGTGGGAAGTCCATATTATATTGCTCCAGAGGTATTGGAGAAGCGTTATGGACCAGAGGCTGATATATGGACTGCTGGAGTGATTCTCTATGTATTGCTGACTGGTGTTCCTCCATTTTGGGCAGATACACAAAGCGGGATATATGAAAAAGTACTGGATGGACGTATTGATTTTAAATCAAACCGGTGGCCCAGGATATCTGACAGTGCAAAGGATCTTATAAAAAAGATGCTCTGCCCTTATCCATCAGAGCGTTTGAAAGCCCATGAAGTGCTAAAGCATCCATGGATATGTGATAATGGAGTGGCTACTGAACGAGCTCTGGATCCAAGTGTACTTCCTCGTCTCAAGCAATTTTCTGCAATGAATAGGTTAAAGAAATTGTCTCTCCAGATTATTGCTGAGCGTCTTTCAGAAGAGGAGATTGTTGGGTTAAGAGAAATGTTCAAGGCTATGGACACCAAAAACAGAAGTGTGGTTACATTTGGTGAGCTTAAGGGACTGAAAAGATACAGCTCAGTGTTCAAGGATACTGAAATTAACGACTTAATGGAAGCAGCTGATGACACCACCTCCACCATCAACTGGGAAGAGTTTATTGCTGCAGCAGTGTCTCTTAATAAAATAGAACGTGAGAAACACTTGATGGCAGCCTTTACATACTTTGACAAAGATGGAAGTGGTTTTATCACAGTTGACAAGCTTCAAAAGGCTTGCATGGAACGTAACATGGAAGATACTTTCCTTGAAGAGATGATTCTGGAGGTTGATCAAAACAATGATGGTCAAATCGATTATGCTGAATTTGTCACAATGATGCAAAGCAACAACTTTGGACTTGGGTGGCAAACGGTGGAAAGCAGCCTGAATGTAGCCCTGAGGGAGGCACCCCAAGTATACTGA More
Protein seq	MGNSCQNGTYGNNYQNSNRFQNDRFASRYVDGNDTEDCYSGSSRASLAGALRQGLNLKSPVLGYKTPNVRELYTLGRELGQGQFGKTYLCTEISTGCQYACKTILKSNLRCVSDIEDVRREIQIMHHLSGQKNIVTIKDTYEDEQAVHIVMELCAGGELFSKIQKRGHYSERKAAELIKIIVGIIETCHSHGVMHRDLKPENFLLLDADDEFSVKAIDFGLSVFFRPGQVFREVVGSPYYIAPEVLEKRYGPEADIWTAGVILYVLLTGVPPFWADTQSGIYEKVLDGRIDFKSNRWPRISDSAKDLIKKMLCPYPSERLKAHEVLKHPWICDNGVATERALDPSVLPRLKQFSAMNRLKKLSLQIIAERLSEEEIVGLREMFKAMDTKNRSVVTFGELKGLKRYSSVFKDTEINDLMEAADDTTSTINWEEFIAAAVSLNKIEREKHLMAAFTYFDKDGSGFITVDKLQKACMERNMEDTFLEEMILEVDQNNDGQIDYAEFVTMMQSNNFGLGWQTVESSLNVALREAPQVY More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsIR64_10g0018460	OsIR64_10g0018460.02	Chr10	23249256	23254079	+	NAM
CDS seq	ATGGGGAATTCTTGCCAAAATGGAACCTATGGGAACAATTACCAGAACAGCAACCGGTTTCAGAATGACCGTTTTGCTTCTCGGTACGTTGATGGGAATGATACTGAGGATTGCTACTCGGGCTCGTCAAGGGCCAGCTTAGCGGGTGCTCTGCGGCAAGGGCTGAACCTAAAGTCCCCTGTCCTTGGATACAAGACTCCAAATGTAAGGGAGCTCTATACTCTTGGCCGGGAGCTTGGACAGGGACAGTTCGGGAAAACATACCTCTGCACTGAGATTAGCACAGGGTGTCAATATGCATGCAAGACTATCTTAAAGAGTAATCTCCGATGTGTGTCAGATATCGAGGACGTGCGCCGTGAAATCCAGATAATGCACCATCTTTCGGGCCAGAAGAATATAGTGACAATCAAGGACACATATGAGGATGAGCAGGCCGTGCACATCGTCATGGAGCTCTGTGCAGGTGGTGAGCTCTTCAGCAAGATTCAGAAGCGAGGTCATTACAGTGAACGGAAGGCTGCAGAGCTTATAAAAATTATAGTTGGCATCATAGAAACATGCCATTCACATGGAGTGATGCACCGGGATCTCAAGCCAGAAAATTTCCTCTTACTGGACGCAGACGATGAATTCTCGGTTAAAGCAATTGACTTTGGTCTATCTGTGTTCTTCAGACCAGGTCAGGTTTTCAGAGAGGTAGTGGGAAGTCCATATTATATTGCTCCAGAGGTATTGGAGAAGCGTTATGGACCAGAGGCTGATATATGGACTGCTGGAGTGATTCTCTATGTATTGCTGACTGGTGTTCCTCCATTTTGGGCAGATACACAAAGCGGGATATATGAAAAAGTACTGGATGGACGTATTGATTTTAAATCAAACCGGTGGCCCAGGATATCTGACAGTGCAAAGGATCTTATAAAAAAGATGCTCTGCCCTTATCCATCAGAGCGTTTGAAAGCCCATGAAGTGCTAAAGCATCCATGGATATGTGATAATGGAGTGGCTACTGAACGAGCTCTGGATCCAAGTGTACTTCCTCGTCTCAAGCAATTTTCTGCAATGAATAGGTTAAAGAAATTGTCTCTCCAGATTATTGCTGAGCGTCTTTCAGAAGAGGAGATTGTTGGGTTAAGAGAAATGTTCAAGGCTATGGACACCAAAAACAGAAGTGTGGTTACATTTGGTGAGCTTAAGGGACTGAAAAGATACAGCTCAGTGTTCAAGGATACTGAAATTAACGACTTAATGGAAGCAGCTGATGACACCACCTCCACCATCAACTGGGAAGAGTTTATTGCTGCAGCAGTGTCTCTTAATAAAATAGAACGTGAGAAACACTTGATGGCAGCCTTTACATACTTTGACAAAGATGGAAGTGGTTTTATCACAGTTGACAAGCTTCAAAAGGCTTGCATGGAACGTAACATGGAAGATACTTTCCTTGAAGAGATGATTCTGGAGGTTGATCAAAACAATGATGGTCAAATCGATTATGCTGAATTTGTCACAATGATGCAAAGCAACAACTTTGGACTTGGGTGGCAAACGGTGGAAAGCAGCCTGAATGTAGCCCTGAGGGAGGCACCCCAAGTATACTGA More
Protein seq	MGNSCQNGTYGNNYQNSNRFQNDRFASRYVDGNDTEDCYSGSSRASLAGALRQGLNLKSPVLGYKTPNVRELYTLGRELGQGQFGKTYLCTEISTGCQYACKTILKSNLRCVSDIEDVRREIQIMHHLSGQKNIVTIKDTYEDEQAVHIVMELCAGGELFSKIQKRGHYSERKAAELIKIIVGIIETCHSHGVMHRDLKPENFLLLDADDEFSVKAIDFGLSVFFRPGQVFREVVGSPYYIAPEVLEKRYGPEADIWTAGVILYVLLTGVPPFWADTQSGIYEKVLDGRIDFKSNRWPRISDSAKDLIKKMLCPYPSERLKAHEVLKHPWICDNGVATERALDPSVLPRLKQFSAMNRLKKLSLQIIAERLSEEEIVGLREMFKAMDTKNRSVVTFGELKGLKRYSSVFKDTEINDLMEAADDTTSTINWEEFIAAAVSLNKIEREKHLMAAFTYFDKDGSGFITVDKLQKACMERNMEDTFLEEMILEVDQNNDGQIDYAEFVTMMQSNNFGLGWQTVESSLNVALREAPQVY More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsIR64_10g0018460	OsIR64_10g0018460.03	Chr10	23249104	23253857	+	IsoSeq
CDS seq	AGTGCTCTCCTCTCCATTTTTTTCCTCCTATCGATTTTGCAATTTAGTCCCTTGCTCCTCCGATCGAGGCTGAAGCGGCTTCAGGATATACATTTTTGTGGGAATGGGGAATTCTTGCCAAAATGGAACCTATGGGAACAATTACCAGAACAGCAACCGGTTTCA
Protein seq	SALLSIFFLLSILQFSPLLLRSRLKRLQDIHFCGNGEFLPKWNLWEQLPEQQPVS

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.951536	0.924928	2.797848

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_10g0539600	RBH	4.107643	3.502006	26.970398
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os10g39420	RBH	3.660861	2.858986	7.144029
Nipponbare \| IRGSP 1.0 \| RAP-db	Os10g0539600	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_10g0018530	RBH	0.576387	28.445131	8.298951
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_10g0018920	RBH	1.683281	7.340865	3.182293
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_10g0018310	RBH	2.822846	20.399288	18.109062
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_10g0018860	RBH	0.644892	0.281742	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_10g0018600	RBH	10.599725	24.080418	30.045731
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_10G0347100	RBH	14.091683	10.966488	17.743553
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_02g0028880	SBH	0.124099	0.514315	0.532726
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_10G0372300	RBH	13.594283	39.0271875	21.001229
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_10g0018220	RBH	0.568063	0.170419	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_10g0018160	RBH	0.965163	0.0	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_10g0018690	RBH	27.699385	14.373464	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_10g0018260	RBH	2.034447	0.0	4.184555
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_10g0018780	RBH	1.037151	7.031753	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_10G018530	RBH	0.060557	2.352162	5.393028
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_10g0018600	RBH	0.220125	23.142822	15.902512

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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