Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_10g0003120 | OGI:10012670 | 15/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr10:4025841-4029583 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGTCGCATGCCCCCCGATTCTTGCTCTTCCTCCTCCAGCTCCTCGCCGCCTCCGTCGTCGCGCGGCCGCCGCCGCCGGAGAGAGCGGACTCCGCCGCGGTCCTGCGCTCGTTTCTTGCGTCTCTGCCGCCGCCGTCGCGGCGCGTGCTCCGGCCGTCATGGCGGCGTGGCGGCGGCGGCGGCGCCCCGCACTGCGCGTTTCTTGGCGTCACGTGCGACGCCGCGGGCGCGGTCGCCGCGCTCAACCTCTCCGGGGCGGGGCTGGCCGGCGAGCTGGCGGCGTCCGCGCCGCGCCTCTGCGCGCTCCCGGCTCTCGCCGCGTTCGACCTCAGCCGGAACGGCTTCACCGGCTCGGTCCCCGCGGCGCTCGCGGCGTGCTCCCGCGTCGCGACGCTCGTCCTCAGCTTCAACTCCCTCTCCGGCGCCGTCCCCCCGGAGCTCCTCTCCTCGCGCCGCCTGCGGAAGGTCGACCTCAACAGCAACGCGCTCACCGGCGAGATCCCCACCACCGGCCTCGCCGCCGGCTCATCGGTTCTCGAGTACCTCGACCTCAGCGTCAACTCCCTCTCCGGCGCCATTCCGCCGGAGCTCGCCGCCGCGCTCCCGGAGCTCACCTACTTGGACTTGAGCAGCAACAACCTATCCGGGCCAATGCCGGAGTTCCCGCCGCGGTGCGGGCTCGTCTACCTCAGCCTCTACTCCAACCAGCTCGCCGGAGAGCTCCCCCGCAGCCTCACCAACTGCGGCAACCTCACCGTCTTGTATCTATCCTACAACAAAATCGGCGGCGAGGTGCCCGATTTCTTCGCCTCCATGGCTAACTTGCAAACGCTTTACCTTGATGATAATGCCTTCGTCGGGGAGTTGCCGGCAAGCATTGGTGAGCTTGTGAATTTGGAAGAATTGGTGGTGTCGGAAAACGCGTTCACCGGCACAATCCCTGAAGCAATTGGGCGGTGTCGATCGTTGACAATGCTCTACTTGAATGGCAACAGGTTTACCGGCTCAATTCCAAAGTTCATCGGTGATTTGACCCGATTGCAGTTGTTCTCGATTGCGGACAATGGAATTACAGGTGAAATTCCACCGGAGATTGGGAAATGCCGCGGATTGGTGGAAATAGCACTTCAGAACAACAGCCTTTCTGGGATGATACCACCGGATATCGCCGAGCTCAACCAACTGCAGAAGTTGAGCCTGTTCGATAACATACTCCGCGGTCCAGTTCCTCTGGCATTGTGGCGATTATCCAACATGGCAGTGCTGCAACTCAACAATAATAGTTTCAGTGGTGAGATACATTCAGATATCACTCAAATGAGGAATCTTAGGAATATCACCTTGTACAACAACAACTTCACTGGTGAGCTACCACAGGAATTGGGGCTGAACACGACACCGGGGCTTCTTCATATTGACCTCACTCGCAACCATTTCCGTGGCGCAATTCCACCTGGTTTGTGCACGGGAGGCCAGCTTGCAGTTCTTGATCTTGGATACAACCAGTTTGACGGAGGATTTCCCAGTGAGATAGCTAAATGTCAGTCTCTGTACAGGGTTAATCTGAACAATAATCAGATCAATGGGAGCTTACCTGCAGATTTTGGCACCAATTGGGGGTTGTCATACATAGATATGAGCAGCAATCTACTTGAAGGGATAATACCAAGTGCGCTCGGTTCATGGAGCAACCTCACAAAGCTTGATCTCTCAAGCAACAGCTTCTCAGGTCCAATACCTCGTGAGCTCGGCAACCTGAGCAATCTTGGAACTCTGCGCATGTCATCAAACAGGCTGACCGGACCGATACCACATGAATTGGGAAATTGCAAGAAACTTGCCCTTCTGGATCTTGGAAATAACTTTCTCAGTGGAAGTATTCCAGCAGAGATCACAACACTTGGTAGCCTGCAAAATCTATTACTTGCTGGAAACAACCTGACTGGAACAATACCAGACTCCTTCACTGCAACTCAGGCCCTCCTCGAGTTGCAGCTTGGTGATAATTCCTTAGAAGGAGCTATACCACACAGCTTAGGTAGTCTTCAGTACATCTCTAAAGCTCTTAACATTAGCAACAACCAGTTGAGCGGACAAATCCCAAGTAGCCTCGGCAACCTTCAGGATCTGGAAGTACTTGACTTGTCGAATAACTCATTGTCTGGTATAATTCCATCACAGCTGATCAACATGATCTCACTTTCTGTTGTTAATCTATCTTTTAATAAGCTATCTGGTGAGCTCCCAGCTGGGTGGGCTAAGCTCGCCGCGCAGTCTCCTGAAAGCTTTTTGGGGAATCCTCAATTATGTGTACACTCCAGCGATGCACCATGCTTGAAGAGTCAATCTGCGAAAAATAGAACCTGGAAAACACGGATTGTTGTCGGATTGGTAATCTCCTCTTTCTCTGTTATGGTTGCTAGTCTGTTTGCTATTCGTTACATTCTGAAGAGGTCTCAGCGCCTATCGACGAATCGTGTCTCGGTCCGTAATATGGACTCAACTGAGGAGTTACCAGAAGAATTGACCTATGAAGATATCCTCCGTGGCACTGACAATTGGAGCGAGAAGTATGTCATTGGAAGAGGTCGGCACGGGACGGTCTACCGGACAGAGTGCAAACTTGGAAAGCAGTGGGCAGTCAAGACAGTTGATCTGTCACAATGCAAACTCCCCATTGAGATGAAGATTTTGAACACAGTGAAGCACCGGAACATCGTCAGGATGGCTGGGTACTGCATCCGTGGAAGCGTCGGCCTAATCCTCTACGAGTACATGCCCGAGGGGACGCTGTTTGAACTGTTGCACAGAAGGAAGCCTCATGCTGCCCTTGACTGGACAGTCCGGCACCAGATCGCCTTCGGTGTAGCACAAGGCCTCTCTTATCTGCATCATGATTGTGTTCCCATGATTGTTCATAGAGATGTCAAGTCAAGCAACATACTGATGGACACCGAGCTAGTACCGAAGCTCACAGACTTCGGCATGGGGAAGATTGTTGAAGATGATGATTTGGATGCCACGGTGTCAGTTGTTGTTGGCACCCTCGGCTACATTGCTCCCGGTAATCTTCCTTCTTTCACTTGCATATTCCTCAGATCACAGTCGTCTTGAACTTGAGTACTCAACAATCGTTATGTCTTCTTCTCAGAGCATGGGTACTACACAAGATTAACCGAAAAGAGCGACATCTACAGCTACGGAGTAGTGCTACTTGAGCTCCTGTGCAGGAAGATGCCTGTGGATCCTGCATTCGGGGACGGTGTGGACATTGTGACATGGATGAGATCGAACCTGACGCAGGCAGATCGCCGCGTCATCATGGAATGCCTCGATGAGGAGATCATGTACTGGCCTGAAGATGAGCAGGCAAAGGCACTGGACTTGCTGGACCTGGCCATGTACTGCACACAATTGGCTTGCCAGTCAAGACCTTCCATGAGGGAAGTTGTGAACAATCTAATGAGGATGGACAAGTAAAGAAATGTGAAGATTTTAACAACATTCCGAGGCCGAAAAGTTATCTCCTAAATAGCTTACATGTAGAAATGCAACTGTAGAGTTGATACAAATGTTTCTTCAGAATTTTGTAAGACACTTAAAATTTTCAGTTATCTATAGGGAAAAATAATTACAGTGTTATACTAGAATATGTTTGTATTAGTATCATAGAAATTCTGGCCTCAAGTTATGCTGTAAATTTATCTGCAAATAACTTTCTAAAGGTAAAATTTCTGTTTCCT
More
|
||||||||||
| CDS seq | ATGTCGCATGCCCCCCGATTCTTGCTCTTCCTCCTCCAGCTCCTCGCCGCCTCCGTCGTCGCGCGGCCGCCGCCGCCGGAGAGAGCGGACTCCGCCGCGGTCCTGCGCTCGTTTCTTGCGTCTCTGCCGCCGCCGTCGCGGCGCGTGCTCCGGCCGTCATGGCGGCGTGGCGGCGGCGGCGGCGCCCCGCACTGCGCGTTTCTTGGCGTCACGTGCGACGCCGCGGGCGCGGTCGCCGCGCTCAACCTCTCCGGGGCGGGGCTGGCCGGCGAGCTGGCGGCGTCCGCGCCGCGCCTCTGCGCGCTCCCGGCTCTCGCCGCGTTCGACCTCAGCCGGAACGGCTTCACCGGCTCGGTCCCCGCGGCGCTCGCGGCGTGCTCCCGCGTCGCGACGCTCGTCCTCAGCTTCAACTCCCTCTCCGGCGCCGTCCCCCCGGAGCTCCTCTCCTCGCGCCGCCTGCGGAAGGTCGACCTCAACAGCAACGCGCTCACCGGCGAGATCCCCACCACCGGCCTCGCCGCCGGCTCATCGGTTCTCGAGTACCTCGACCTCAGCGTCAACTCCCTCTCCGGCGCCATTCCGCCGGAGCTCGCCGCCGCGCTCCCGGAGCTCACCTACTTGGACTTGAGCAGCAACAACCTATCCGGGCCAATGCCGGAGTTCCCGCCGCGGTGCGGGCTCGTCTACCTCAGCCTCTACTCCAACCAGCTCGCCGGAGAGCTCCCCCGCAGCCTCACCAACTGCGGCAACCTCACCGTCTTGTATCTATCCTACAACAAAATCGGCGGCGAGGTGCCCGATTTCTTCGCCTCCATGGCTAACTTGCAAACGCTTTACCTTGATGATAATGCCTTCGTCGGGGAGTTGCCGGCAAGCATTGGTGAGCTTGTGAATTTGGAAGAATTGGTGGTGTCGGAAAACGCGTTCACCGGCACAATCCCTGAAGCAATTGGGCGGTGTCGATCGTTGACAATGCTCTACTTGAATGGCAACAGGTTTACCGGCTCAATTCCAAAGTTCATCGGTGATTTGACCCGATTGCAGTTGTTCTCGATTGCGGACAATGGAATTACAGGTGAAATTCCACCGGAGATTGGGAAATGCCGCGGATTGGTGGAAATAGCACTTCAGAACAACAGCCTTTCTGGGATGATACCACCGGATATCGCCGAGCTCAACCAACTGCAGAAGTTGAGCCTGTTCGATAACATACTCCGCGGTCCAGTTCCTCTGGCATTGTGGCGATTATCCAACATGGCAGTGCTGCAACTCAACAATAATAGTTTCAGTGGTGAGATACATTCAGATATCACTCAAATGAGGAATCTTAGGAATATCACCTTGTACAACAACAACTTCACTGGTGAGCTACCACAGGAATTGGGGCTGAACACGACACCGGGGCTTCTTCATATTGACCTCACTCGCAACCATTTCCGTGGCGCAATTCCACCTGGTTTGTGCACGGGAGGCCAGCTTGCAGTTCTTGATCTTGGATACAACCAGTTTGACGGAGGATTTCCCAGTGAGATAGCTAAATGTCAGTCTCTGTACAGGGTTAATCTGAACAATAATCAGATCAATGGGAGCTTACCTGCAGATTTTGGCACCAATTGGGGGTTGTCATACATAGATATGAGCAGCAATCTACTTGAAGGGATAATACCAAGTGCGCTCGGTTCATGGAGCAACCTCACAAAGCTTGATCTCTCAAGCAACAGCTTCTCAGGTCCAATACCTCGTGAGCTCGGCAACCTGAGCAATCTTGGAACTCTGCGCATGTCATCAAACAGGCTGACCGGACCGATACCACATGAATTGGGAAATTGCAAGAAACTTGCCCTTCTGGATCTTGGAAATAACTTTCTCAGTGGAAGTATTCCAGCAGAGATCACAACACTTGGTAGCCTGCAAAATCTATTACTTGCTGGAAACAACCTGACTGGAACAATACCAGACTCCTTCACTGCAACTCAGGCCCTCCTCGAGTTGCAGCTTGGTGATAATTCCTTAGAAGGAGCTATACCACACAGCTTAGGTAGTCTTCAGTACATCTCTAAAGCTCTTAACATTAGCAACAACCAGTTGAGCGGACAAATCCCAAGTAGCCTCGGCAACCTTCAGGATCTGGAAGTACTTGACTTGTCGAATAACTCATTGTCTGGTATAATTCCATCACAGCTGATCAACATGATCTCACTTTCTGTTGTTAATCTATCTTTTAATAAGCTATCTGGTGAGCTCCCAGCTGGGTGGGCTAAGCTCGCCGCGCAGTCTCCTGAAAGCTTTTTGGGGAATCCTCAATTATGTGTACACTCCAGCGATGCACCATGCTTGAAGAGTCAATCTGCGAAAAATAGAACCTGGAAAACACGGATTGTTGTCGGATTGGTAATCTCCTCTTTCTCTGTTATGGTTGCTAGTCTGTTTGCTATTCGTTACATTCTGAAGAGGTCTCAGCGCCTATCGACGAATCGTGTCTCGGTCCGTAATATGGACTCAACTGAGGAGTTACCAGAAGAATTGACCTATGAAGATATCCTCCGTGGCACTGACAATTGGAGCGAGAAGTATGTCATTGGAAGAGGTCGGCACGGGACGGTCTACCGGACAGAGTGCAAACTTGGAAAGCAGTGGGCAGTCAAGACAGTTGATCTGTCACAATGCAAACTCCCCATTGAGATGAAGATTTTGAACACAGTGAAGCACCGGAACATCGTCAGGATGGCTGGGTACTGCATCCGTGGAAGCGTCGGCCTAATCCTCTACGAGTACATGCCCGAGGGGACGCTGTTTGAACTGTTGCACAGAAGGAAGCCTCATGCTGCCCTTGACTGGACAGTCCGGCACCAGATCGCCTTCGGTGTAGCACAAGGCCTCTCTTATCTGCATCATGATTGTGTTCCCATGATTGTTCATAGAGATGTCAAGTCAAGCAACATACTGATGGACACCGAGCTAGTACCGAAGCTCACAGACTTCGGCATGGGGAAGATTGTTGAAGATGATGATTTGGATGCCACGGTGTCAGTTGTTGTTGGCACCCTCGGCTACATTGCTCCCGAGCATGGGTACTACACAAGATTAACCGAAAAGAGCGACATCTACAGCTACGGAGTAGTGCTACTTGAGCTCCTGTGCAGGAAGATGCCTGTGGATCCTGCATTCGGGGACGGTGTGGACATTGTGACATGGATGAGATCGAACCTGACGCAGGCAGATCGCCGCGTCATCATGGAATGCCTCGATGAGGAGATCATGTACTGGCCTGAAGATGAGCAGGCAAAGGCACTGGACTTGCTGGACCTGGCCATGTACTGCACACAATTGGCTTGCCAGTCAAGACCTTCCATGAGGGAAGTTGTGAACAATCTAATGAGGATGGACAAGTAA
More
|
||||||||||
| Protein seq | MSHAPRFLLFLLQLLAASVVARPPPPERADSAAVLRSFLASLPPPSRRVLRPSWRRGGGGGAPHCAFLGVTCDAAGAVAALNLSGAGLAGELAASAPRLCALPALAAFDLSRNGFTGSVPAALAACSRVATLVLSFNSLSGAVPPELLSSRRLRKVDLNSNALTGEIPTTGLAAGSSVLEYLDLSVNSLSGAIPPELAAALPELTYLDLSSNNLSGPMPEFPPRCGLVYLSLYSNQLAGELPRSLTNCGNLTVLYLSYNKIGGEVPDFFASMANLQTLYLDDNAFVGELPASIGELVNLEELVVSENAFTGTIPEAIGRCRSLTMLYLNGNRFTGSIPKFIGDLTRLQLFSIADNGITGEIPPEIGKCRGLVEIALQNNSLSGMIPPDIAELNQLQKLSLFDNILRGPVPLALWRLSNMAVLQLNNNSFSGEIHSDITQMRNLRNITLYNNNFTGELPQELGLNTTPGLLHIDLTRNHFRGAIPPGLCTGGQLAVLDLGYNQFDGGFPSEIAKCQSLYRVNLNNNQINGSLPADFGTNWGLSYIDMSSNLLEGIIPSALGSWSNLTKLDLSSNSFSGPIPRELGNLSNLGTLRMSSNRLTGPIPHELGNCKKLALLDLGNNFLSGSIPAEITTLGSLQNLLLAGNNLTGTIPDSFTATQALLELQLGDNSLEGAIPHSLGSLQYISKALNISNNQLSGQIPSSLGNLQDLEVLDLSNNSLSGIIPSQLINMISLSVVNLSFNKLSGELPAGWAKLAAQSPESFLGNPQLCVHSSDAPCLKSQSAKNRTWKTRIVVGLVISSFSVMVASLFAIRYILKRSQRLSTNRVSVRNMDSTEELPEELTYEDILRGTDNWSEKYVIGRGRHGTVYRTECKLGKQWAVKTVDLSQCKLPIEMKILNTVKHRNIVRMAGYCIRGSVGLILYEYMPEGTLFELLHRRKPHAALDWTVRHQIAFGVAQGLSYLHHDCVPMIVHRDVKSSNILMDTELVPKLTDFGMGKIVEDDDLDATVSVVVGTLGYIAPEHGYYTRLTEKSDIYSYGVVLLELLCRKMPVDPAFGDGVDIVTWMRSNLTQADRRVIMECLDEEIMYWPEDEQAKALDLLDLAMYCTQLACQSRPSMREVVNNLMRMDK |
||||||||||
| Function | Receptor-like protein kinase [UniProtKB/Swiss-Prot:P93194] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_10g0003120 | OsIR64_10g0003120.01 | Chr10 | 4025841 | 4029583 | + | NAM | ||
| CDS seq | ATGTCGCATGCCCCCCGATTCTTGCTCTTCCTCCTCCAGCTCCTCGCCGCCTCCGTCGTCGCGCGGCCGCCGCCGCCGGAGAGAGCGGACTCCGCCGCGGTCCTGCGCTCGTTTCTTGCGTCTCTGCCGCCGCCGTCGCGGCGCGTGCTCCGGCCGTCATGGCGGCGTGGCGGCGGCGGCGGCGCCCCGCACTGCGCGTTTCTTGGCGTCACGTGCGACGCCGCGGGCGCGGTCGCCGCGCTCAACCTCTCCGGGGCGGGGCTGGCCGGCGAGCTGGCGGCGTCCGCGCCGCGCCTCTGCGCGCTCCCGGCTCTCGCCGCGTTCGACCTCAGCCGGAACGGCTTCACCGGCTCGGTCCCCGCGGCGCTCGCGGCGTGCTCCCGCGTCGCGACGCTCGTCCTCAGCTTCAACTCCCTCTCCGGCGCCGTCCCCCCGGAGCTCCTCTCCTCGCGCCGCCTGCGGAAGGTCGACCTCAACAGCAACGCGCTCACCGGCGAGATCCCCACCACCGGCCTCGCCGCCGGCTCATCGGTTCTCGAGTACCTCGACCTCAGCGTCAACTCCCTCTCCGGCGCCATTCCGCCGGAGCTCGCCGCCGCGCTCCCGGAGCTCACCTACTTGGACTTGAGCAGCAACAACCTATCCGGGCCAATGCCGGAGTTCCCGCCGCGGTGCGGGCTCGTCTACCTCAGCCTCTACTCCAACCAGCTCGCCGGAGAGCTCCCCCGCAGCCTCACCAACTGCGGCAACCTCACCGTCTTGTATCTATCCTACAACAAAATCGGCGGCGAGGTGCCCGATTTCTTCGCCTCCATGGCTAACTTGCAAACGCTTTACCTTGATGATAATGCCTTCGTCGGGGAGTTGCCGGCAAGCATTGGTGAGCTTGTGAATTTGGAAGAATTGGTGGTGTCGGAAAACGCGTTCACCGGCACAATCCCTGAAGCAATTGGGCGGTGTCGATCGTTGACAATGCTCTACTTGAATGGCAACAGGTTTACCGGCTCAATTCCAAAGTTCATCGGTGATTTGACCCGATTGCAGTTGTTCTCGATTGCGGACAATGGAATTACAGGTGAAATTCCACCGGAGATTGGGAAATGCCGCGGATTGGTGGAAATAGCACTTCAGAACAACAGCCTTTCTGGGATGATACCACCGGATATCGCCGAGCTCAACCAACTGCAGAAGTTGAGCCTGTTCGATAACATACTCCGCGGTCCAGTTCCTCTGGCATTGTGGCGATTATCCAACATGGCAGTGCTGCAACTCAACAATAATAGTTTCAGTGGTGAGATACATTCAGATATCACTCAAATGAGGAATCTTAGGAATATCACCTTGTACAACAACAACTTCACTGGTGAGCTACCACAGGAATTGGGGCTGAACACGACACCGGGGCTTCTTCATATTGACCTCACTCGCAACCATTTCCGTGGCGCAATTCCACCTGGTTTGTGCACGGGAGGCCAGCTTGCAGTTCTTGATCTTGGATACAACCAGTTTGACGGAGGATTTCCCAGTGAGATAGCTAAATGTCAGTCTCTGTACAGGGTTAATCTGAACAATAATCAGATCAATGGGAGCTTACCTGCAGATTTTGGCACCAATTGGGGGTTGTCATACATAGATATGAGCAGCAATCTACTTGAAGGGATAATACCAAGTGCGCTCGGTTCATGGAGCAACCTCACAAAGCTTGATCTCTCAAGCAACAGCTTCTCAGGTCCAATACCTCGTGAGCTCGGCAACCTGAGCAATCTTGGAACTCTGCGCATGTCATCAAACAGGCTGACCGGACCGATACCACATGAATTGGGAAATTGCAAGAAACTTGCCCTTCTGGATCTTGGAAATAACTTTCTCAGTGGAAGTATTCCAGCAGAGATCACAACACTTGGTAGCCTGCAAAATCTATTACTTGCTGGAAACAACCTGACTGGAACAATACCAGACTCCTTCACTGCAACTCAGGCCCTCCTCGAGTTGCAGCTTGGTGATAATTCCTTAGAAGGAGCTATACCACACAGCTTAGGTAGTCTTCAGTACATCTCTAAAGCTCTTAACATTAGCAACAACCAGTTGAGCGGACAAATCCCAAGTAGCCTCGGCAACCTTCAGGATCTGGAAGTACTTGACTTGTCGAATAACTCATTGTCTGGTATAATTCCATCACAGCTGATCAACATGATCTCACTTTCTGTTGTTAATCTATCTTTTAATAAGCTATCTGGTGAGCTCCCAGCTGGGTGGGCTAAGCTCGCCGCGCAGTCTCCTGAAAGCTTTTTGGGGAATCCTCAATTATGTGTACACTCCAGCGATGCACCATGCTTGAAGAGTCAATCTGCGAAAAATAGAACCTGGAAAACACGGATTGTTGTCGGATTGGTAATCTCCTCTTTCTCTGTTATGGTTGCTAGTCTGTTTGCTATTCGTTACATTCTGAAGAGGTCTCAGCGCCTATCGACGAATCGTGTCTCGGTCCGTAATATGGACTCAACTGAGGAGTTACCAGAAGAATTGACCTATGAAGATATCCTCCGTGGCACTGACAATTGGAGCGAGAAGTATGTCATTGGAAGAGGTCGGCACGGGACGGTCTACCGGACAGAGTGCAAACTTGGAAAGCAGTGGGCAGTCAAGACAGTTGATCTGTCACAATGCAAACTCCCCATTGAGATGAAGATTTTGAACACAGTGAAGCACCGGAACATCGTCAGGATGGCTGGGTACTGCATCCGTGGAAGCGTCGGCCTAATCCTCTACGAGTACATGCCCGAGGGGACGCTGTTTGAACTGTTGCACAGAAGGAAGCCTCATGCTGCCCTTGACTGGACAGTCCGGCACCAGATCGCCTTCGGTGTAGCACAAGGCCTCTCTTATCTGCATCATGATTGTGTTCCCATGATTGTTCATAGAGATGTCAAGTCAAGCAACATACTGATGGACACCGAGCTAGTACCGAAGCTCACAGACTTCGGCATGGGGAAGATTGTTGAAGATGATGATTTGGATGCCACGGTGTCAGTTGTTGTTGGCACCCTCGGCTACATTGCTCCCGAGCATGGGTACTACACAAGATTAACCGAAAAGAGCGACATCTACAGCTACGGAGTAGTGCTACTTGAGCTCCTGTGCAGGAAGATGCCTGTGGATCCTGCATTCGGGGACGGTGTGGACATTGTGACATGGATGAGATCGAACCTGACGCAGGCAGATCGCCGCGTCATCATGGAATGCCTCGATGAGGAGATCATGTACTGGCCTGAAGATGAGCAGGCAAAGGCACTGGACTTGCTGGACCTGGCCATGTACTGCACACAATTGGCTTGCCAGTCAAGACCTTCCATGAGGGAAGTTGTGAACAATCTAATGAGGATGGACAAGTAA
More
|
|||||||
| Protein seq | MSHAPRFLLFLLQLLAASVVARPPPPERADSAAVLRSFLASLPPPSRRVLRPSWRRGGGGGAPHCAFLGVTCDAAGAVAALNLSGAGLAGELAASAPRLCALPALAAFDLSRNGFTGSVPAALAACSRVATLVLSFNSLSGAVPPELLSSRRLRKVDLNSNALTGEIPTTGLAAGSSVLEYLDLSVNSLSGAIPPELAAALPELTYLDLSSNNLSGPMPEFPPRCGLVYLSLYSNQLAGELPRSLTNCGNLTVLYLSYNKIGGEVPDFFASMANLQTLYLDDNAFVGELPASIGELVNLEELVVSENAFTGTIPEAIGRCRSLTMLYLNGNRFTGSIPKFIGDLTRLQLFSIADNGITGEIPPEIGKCRGLVEIALQNNSLSGMIPPDIAELNQLQKLSLFDNILRGPVPLALWRLSNMAVLQLNNNSFSGEIHSDITQMRNLRNITLYNNNFTGELPQELGLNTTPGLLHIDLTRNHFRGAIPPGLCTGGQLAVLDLGYNQFDGGFPSEIAKCQSLYRVNLNNNQINGSLPADFGTNWGLSYIDMSSNLLEGIIPSALGSWSNLTKLDLSSNSFSGPIPRELGNLSNLGTLRMSSNRLTGPIPHELGNCKKLALLDLGNNFLSGSIPAEITTLGSLQNLLLAGNNLTGTIPDSFTATQALLELQLGDNSLEGAIPHSLGSLQYISKALNISNNQLSGQIPSSLGNLQDLEVLDLSNNSLSGIIPSQLINMISLSVVNLSFNKLSGELPAGWAKLAAQSPESFLGNPQLCVHSSDAPCLKSQSAKNRTWKTRIVVGLVISSFSVMVASLFAIRYILKRSQRLSTNRVSVRNMDSTEELPEELTYEDILRGTDNWSEKYVIGRGRHGTVYRTECKLGKQWAVKTVDLSQCKLPIEMKILNTVKHRNIVRMAGYCIRGSVGLILYEYMPEGTLFELLHRRKPHAALDWTVRHQIAFGVAQGLSYLHHDCVPMIVHRDVKSSNILMDTELVPKLTDFGMGKIVEDDDLDATVSVVVGTLGYIAPEHGYYTRLTEKSDIYSYGVVLLELLCRKMPVDPAFGDGVDIVTWMRSNLTQADRRVIMECLDEEIMYWPEDEQAKALDLLDLAMYCTQLACQSRPSMREVVNNLMRMDK
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.026465 | 0.043872 | 0.101131 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0155800 | RBH | 1.250714 | 0.591484 | 1.550211 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g06760 | RBH | 0.631587 | 0.275909 | 0.313271 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0155800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0002990 | RBH | 0.207678 | 0.717761 | 1.894961 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0002920 | RBH | 0.000000 | 0.586349 | 0.348483 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0002880 | RBH | 0.341003 | 0.609809 | 0.633246 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0003210 | SBH | 0.0 | 0.025140 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0002830 | RBH | 0.286334 | 1.885871 | 0.309288 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0060800 | RBH | 0.474298 | 2.2382225 | 1.5154645 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0003110 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0067800 | RBH | 0.8288215 | 4.756566 | 2.681307 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0002930 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0002990 | RBH | 0.049891 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0003030 | RBH | 1.288694 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0002850 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0003080 | RBH | 0.032294 | 1.517144 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G003000 | RBH | 0.064326 | 0.000000 | 0.290531 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0003050 | RBH | 0.000000 | 1.081251 | 0.858769 |
