Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_09g0018830 | OGI:09063770 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr09:23131646-23136803 | ||||||||
| Gene Symbol | NLP4, OsNLP4, NLP4.1, NLP4.2 | ||||||||||
| DNA seq | ATCAGATGCCTTTGGAATGAATGGTGGGAGGTGTTCTGGTGGAGCACTAAACCTTTTCTAGAGCTACTACTTGTTGGAGGCTAACACCGAGCTAGGAAGAAGAAAGGAGACTTTTTCATGAGGAGAAGGGAGGCATACGATTACCAGTGAGCTACTACTCTATCAATCTCTTTCTTTGCTTCCTTTCTGTAGAAAATGATGTGTTCTTCCCTACTACCCACACCCTGCAATCCAAACGCAGGCAAATCTAGCACAAAATTCATCCCAGGACTCCCAGTCTCCTGTACTCCCCTTGCCCATGATGTGCAGCGAGCTTTACTTCTTGATTCCGAACAGGAGAGAAGTATTATGACTTGCATGCTCCTTGCCCAAGTTCTTGTCATCATTTCCAAGAGCAAAACCATCTTGTTGGCTTTAATACTGATGCAGTAACTATGGTGTCAAATTCTGTGACCAGATTCTGAAGGAAACCTTACCTGCATGGAAGAGGGAGACCCCCAGCCCAGCATCTCCTTGGCACGCACTCCGTCGGAAGGCGCGGCGGCGGCAGTCGACTTGGATCTCCTTGAGCAGCTTCTCTCAGCCGACAACGCCTGGCTTGAAGTGGCAGCAAACACTTCACGCTCACCCAACTTCTTTGCTACCCCCTCCAACTGCTTGACAGATGCTTCGGTCGCCACCACCACACCTGCAAATTCATGGTGGATTCAGCCGAGCGGTGCAAGCACCTCAGTTCGGGAACGGTTTGACCAAGCTCTAGCTTACATCAGGGAGACACAGAGAGACGCCGATGTGCTTGTGCAGCTCTGGGTGCCAGTCAAGGGCAACGATGGTCAGCTGGTGTTGACGACGAGCGGGCAGCCATTCACTCTCGATCAGAGGTCCAATAGCCTCATACAGTTCAGGGAGGTTTCGACAAAGTACCAGTTCTCTGCAGATGTTGCTTCAGGTTCCTCACCTGGGCTACCAGGGAGGGTGTTCATCGGTAGGCTTCCTGAATGGTCACCAGATGTTCGATACTTCACCAGCTATGAGTACCCTAGGATCAGCCATGCACAATATTTGGATGTCCACGGGACGATGGGGCTGCCGGTGTTTGAGAGGGGGAACTACTCATGCTTAGGTGTCATCGAGTTGATCATGACCAAGCAGAAGCTCAACTTCACCTCCGAGCTCAATACCATTTGCAGTGCTCTCCAGGTATGAGCATCACTTACTCTGAAAAGTTCAAAAAAGAAATCTTGTTGTAAGTATCTGACCAAGAAATAAACTTGGTTGCACAAGAAAGAGCACGTATGGTTTCACCAAGACATGATGACTATTGATTACAGTAGGAAGTAACTGAATATTTTAGGCATATGGACTTTCTTAATGCTAATGCTCTTTGCAGGCAGTTAACCTGACAAGCACAGAAGTTTCAAGCATTCCGCGCACAAAGGTAAGCAGCAACAGAAATTTGAGAATGTTGTATCACAGTTTTGAGTTGGGGCAATATATGTATTTCATTTCGGACAAAACAATGTACTTCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTACCACATACATATTGATGTTAATAAATCTAGATAGATATATATGTCTAGATTCATTAACATCAATATGAATGTGAGAAATGCTAGAATGACTTACATTGTGAAAAGGAGGGAGTAGTACTTATATATACCATAACCATATGGTGTAAACACATGATAGAGTAACACCTGACATTGGCATGATTTGGAGAACTACTGTTAAATTTTGCATTCTTTAGAAAAGGAAATACCAATCTAGGTAAATGTTGATATAAAGATCTTGATATAAAAATGTGCTTATATATTCTTGTGACTTATGGCTGTTCTTGTTGATTATCAACCAGCTTAACAGTGCTTCCTACAAAGATGCTTTACCAGAGATACTAGAAGTCCTGAGAGCAGCCTGCATCACCCACAAGCTACCATTAGCTCAGACCTGGGTCACATGTGCTCAACAAGGAAAGCGGGGCAGTCGCCATTCTGACGAGAACTACAAGTACTGCATTTCCACCATTGATGCAGCATGCTATGTGAATGAACCCCGGATGCAGAGCTTCCACGAGGCCTGCTCCGAACACCACCTGCTACGGGGGCAGGGGGTTGCAGGGAAAGCCTTCACCACAAACCAGCCATGCTTCCTACCAGATATTGGATCCTCCACTAAACTGGAGTACCCATTGTCTCACCATGCTAAGATTTTCAATTTAAAAGGTGCAGTGGCAATCCGATTGCGTTGCACGCGCACAGGGATTGCCGACTTTGTGCTAGAGTTCTTTCTGCCAACTGACTGTGAAGTACTTGAGGAGCAGAAGGCAGTGCTGGACTCATTATCAGGCACCATGAGAAGTGTTTGCCAAACTTTACGTGTTGTTACTGACAAGGAGATGGAGGATGAGGCCATGAGAGAAATGAATGAGCTGAACTCATTTAGTCCTCGGGGCAAGAACAAAGTTGAGGAGTTATCCTTTGGAGACAACACAAGAGGGGATAGAGAGGAGGCATCTTGGACAACCTTAGTAGGGACTTCACAGAAAGGATCAGATTTAGCTGAATTGCATACACATGGAATGTTATCACATGGAGGGCATGGTTCATCTCAAGCTGGTGATCAAACAAGTAAAGAAGGTAGCAAAGTGAAAAGGCGTACAAAGACGGAGAAGACCGTGAGCTTGCAGGTCCTTCGGCAGTACTTTGCTGGGAGCCTGAAGGATGCAGCAAAGAGCCTTGGAGGTGAGTGACATTAACTTATCAGATAAATGCAAGATTCAGCTATGTATACTTTACTATTTAAGTAGATACCATCAGCCATTAAACTATTAACAAACCCAAGCCATGACGCCAGCATTAACTACTGAATAAGAAAACATTCTTCCATAAAAAAGGTCAACCTTCACATGCACCTTATAGTCAGAATGTGAGCATTGTTATCACCCTATTTTTTCGTGATTCGTGCTATTGCATGAAGGTACAAGGTAAAATTTAGTCACTGTAAACTGATTCATGGAAATAGGGAGAATGACTTAGCAAGTCAACTGTACGGTTTTGGCTGTTTGAGCAGATATGTATAGCCTAGAATTGATCAGTCTCTCATGCAATTATTACTTACAGCTGAGCAGCAACTTCATGCAATAAACATGACTTGAAAAATATATAAAGACAAGAAATATGTAACACACTACAGTCCAGAAACAAGTCCCTAAGTTGGTGTGCCATGTTGCTTTCTAGAAACAGAATAGTTGGTTTGGGAGTTCCATGGATAATAGGCAAAATTATTCCTTCCAGGGGAAAAAAAGACAGCTGTTCATCATGTGCATATACTACATGGCTTGCCCGCATTCTTTTTTAGTAAAAATGATTTATATGTGTTTGATCTAGTGGTAAAAAAATCAAAAAAGAGGAAAAAGCAACTGTATTAAAATTGGCTGCACATATACTCACCACATCTTTTTCTCTCACAGTGTGCCCAACCACCCTGAAAAGAATATGCAGGCAGCATGGCATAAACCGCTGGCCATCACGGAAGATAAAGAAAGTAGACCATTCTCTAAGGAAACTGCAGCAAATCATTGATTCAGTTCATGGAGCAGAGACAGCTTTCCAGCTTAACACCCTCTACAAGGACCTCACAAACACCTCTGTATCATCTGACAACAATTTGTCAGGAAGTGTCACAGTTCCTCTGGCTAACCAGAACAATCTAGACTTTGAAATGCACCAACACCACAGGTTAAGCAGCAATATTCCATCGACTTCACTCTCACACTCATCATGCAGCCAAAGTTCCGATTCAAGCCCTTCCTGCAGTGGAGGAGCAACAAAACATTCACCCCAGGTTGGAGCTGATCAGGTGAGGTCAGGATGTCTTCCACAACATAGCCCTGTCCAGACTCTGCAAACAGAAGCTGCTTCAATAAATGAACATTTCTCAGGTCAGGAAGCACCAATAGATCTCTTACAGGATGTTGCTGAAAAGGCAAATGGTGAACAGCACATGTCTCAAAGTCCATCATCCCCCAAGCAGACTGCAAATGTAGGTATGAGAGTAAAGGTCACTTTTGGCTCAGAAAAGGTGAGGTTCAGATTGAAACCTGAGTGTGACTTTCAAGAACTGAAGCAGGAGATATCAAAACGTCTGAGTATAGCAGACATGAATTCCTTGATTGTAAAGTATTTGGATGACGATTCAGAATGGGTCTTGATGACATGTGATGCAGATTTACACGAGTGTTTTCATGTTTATAAACTAGCAGATATCCAAACAATCAAGATTTCAGTTCATCTGGCTGCTAGTCCAACAACAAGGATCACCATTGGTCACACTGGTTTCTCATGAAGACACAATGAGCCTCACTAGCTTGTGGGATGTCTTCAGAAACCCAGGGAAACCCAAAAAATGGTTGGCAGCCTGTGCAAGGTACCAAGTGCCACAATCAGATGCAGGTCTCCTGTTAGCTGGATTAGTCTTTAATCTGTTGCTGAGATTAGGAACTGCTGATTACACTGGAGTACTTGACAATGGGAATACAGTTTTGAAAAGTAGCATATACCAAAGAAACCATTGACTTGTAAATACTCTCACTGATGGACCTGATATTTTCCAAGCCAGTGTAATTTGATTGAGATCATAGGGTGAAATATATCTAAACCAGGTTAGCCCCAAGTATATTTACGTTCTTGGCATGCTTATGTGCAATAATCCTTGCTGGCTACTGATCATTGATCAATGATCAGTTGATCACCTGTGATAGTCCCTTCAAAGGATACTACAGCACTTGCCCCTCGTCTGAGTGACTAGCAGCAAAGTTTTCTTCCCCCTCTTTTGCCGAAAAAAAGCAGCAAGGACTTCAATTCTTTGGCATGCTTCTCTGAAAATACAGTTTGACACAGCAATGGTTCTTAATAAGTTATAGATATTGGAGGATAGGATGCTTCCTTTGTTCAATTTGTTTGTCCATTGGAAAACAAAAATGTATGGTGCACTCGTACAGCATGATGATGTGTTCTTTTTTGGAGAGATTGCTGCTGTTATTCACGCAAAAAATTGTGTTCTTTAAGAAGATTGGATTTTCTGAACTGTAACAAATGCCATTAGTATGTCTAAATTCTAAAATGTACTCCCT
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| CDS seq | ATGGAAGAGGGAGACCCCCAGCCCAGCATCTCCTTGGCACGCACTCCGTCGGAAGGCGCGGCGGCGGCAGTCGACTTGGATCTCCTTGAGCAGCTTCTCTCAGCCGACAACGCCTGGCTTGAAGTGGCAGCAAACACTTCACGCTCACCCAACTTCTTTGCTACCCCCTCCAACTGCTTGACAGATGCTTCGGTCGCCACCACCACACCTGCAAATTCATGGTGGATTCAGCCGAGCGGTGCAAGCACCTCAGTTCGGGAACGGTTTGACCAAGCTCTAGCTTACATCAGGGAGACACAGAGAGACGCCGATGTGCTTGTGCAGCTCTGGGTGCCAGTCAAGGGCAACGATGGTCAGCTGGTGTTGACGACGAGCGGGCAGCCATTCACTCTCGATCAGAGGTCCAATAGCCTCATACAGTTCAGGGAGGTTTCGACAAAGTACCAGTTCTCTGCAGATGTTGCTTCAGGTTCCTCACCTGGGCTACCAGGGAGGGTGTTCATCGGTAGGCTTCCTGAATGGTCACCAGATGTTCGATACTTCACCAGCTATGAGTACCCTAGGATCAGCCATGCACAATATTTGGATGTCCACGGGACGATGGGGCTGCCGGTGTTTGAGAGGGGGAACTACTCATGCTTAGGTGTCATCGAGTTGATCATGACCAAGCAGAAGCTCAACTTCACCTCCGAGCTCAATACCATTTGCAGTGCTCTCCAGGCAGTTAACCTGACAAGCACAGAAGTTTCAAGCATTCCGCGCACAAAGCTTAACAGTGCTTCCTACAAAGATGCTTTACCAGAGATACTAGAAGTCCTGAGAGCAGCCTGCATCACCCACAAGCTACCATTAGCTCAGACCTGGGTCACATGTGCTCAACAAGGAAAGCGGGGCAGTCGCCATTCTGACGAGAACTACAAGTACTGCATTTCCACCATTGATGCAGCATGCTATGTGAATGAACCCCGGATGCAGAGCTTCCACGAGGCCTGCTCCGAACACCACCTGCTACGGGGGCAGGGGGTTGCAGGGAAAGCCTTCACCACAAACCAGCCATGCTTCCTACCAGATATTGGATCCTCCACTAAACTGGAGTACCCATTGTCTCACCATGCTAAGATTTTCAATTTAAAAGGTGCAGTGGCAATCCGATTGCGTTGCACGCGCACAGGGATTGCCGACTTTGTGCTAGAGTTCTTTCTGCCAACTGACTGTGAAGTACTTGAGGAGCAGAAGGCAGTGCTGGACTCATTATCAGGCACCATGAGAAGTGTTTGCCAAACTTTACGTGTTGTTACTGACAAGGAGATGGAGGATGAGGCCATGAGAGAAATGAATGAGCTGAACTCATTTAGTCCTCGGGGCAAGAACAAAGTTGAGGAGTTATCCTTTGGAGACAACACAAGAGGGGATAGAGAGGAGGCATCTTGGACAACCTTAGTAGGGACTTCACAGAAAGGATCAGATTTAGCTGAATTGCATACACATGGAATGTTATCACATGGAGGGCATGGTTCATCTCAAGCTGGTGATCAAACAAGTAAAGAAGGTAGCAAAGTGAAAAGGCGTACAAAGACGGAGAAGACCGTGAGCTTGCAGGTCCTTCGGCAGTACTTTGCTGGGAGCCTGAAGGATGCAGCAAAGAGCCTTGGAGTGTGCCCAACCACCCTGAAAAGAATATGCAGGCAGCATGGCATAAACCGCTGGCCATCACGGAAGATAAAGAAAGTAGACCATTCTCTAAGGAAACTGCAGCAAATCATTGATTCAGTTCATGGAGCAGAGACAGCTTTCCAGCTTAACACCCTCTACAAGGACCTCACAAACACCTCTGTATCATCTGACAACAATTTGTCAGGAAGTGTCACAGTTCCTCTGGCTAACCAGAACAATCTAGACTTTGAAATGCACCAACACCACAGGTTAAGCAGCAATATTCCATCGACTTCACTCTCACACTCATCATGCAGCCAAAGTTCCGATTCAAGCCCTTCCTGCAGTGGAGGAGCAACAAAACATTCACCCCAGGTTGGAGCTGATCAGGTGAGGTCAGGATGTCTTCCACAACATAGCCCTGTCCAGACTCTGCAAACAGAAGCTGCTTCAATAAATGAACATTTCTCAGGTCAGGAAGCACCAATAGATCTCTTACAGGATGTTGCTGAAAAGGCAAATGGTGAACAGCACATGTCTCAAAGTCCATCATCCCCCAAGCAGACTGCAAATGTAGGTATGAGAGTAAAGGTCACTTTTGGCTCAGAAAAGGTGAGGTTCAGATTGAAACCTGAGTGTGACTTTCAAGAACTGAAGCAGGAGATATCAAAACGTCTGAGTATAGCAGACATGAATTCCTTGATTGTAAAGTATTTGGATGACGATTCAGAATGGGTCTTGATGACATGTGATGCAGATTTACACGAGTGTTTTCATGTTTATAAACTAGCAGATATCCAAACAATCAAGATTTCAGTTCATCTGGCTGCTAGTCCAACAACAAGGATCACCATTGGTCACACTGGTTTCTCATGA
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| Protein seq | MEEGDPQPSISLARTPSEGAAAAVDLDLLEQLLSADNAWLEVAANTSRSPNFFATPSNCLTDASVATTTPANSWWIQPSGASTSVRERFDQALAYIRETQRDADVLVQLWVPVKGNDGQLVLTTSGQPFTLDQRSNSLIQFREVSTKYQFSADVASGSSPGLPGRVFIGRLPEWSPDVRYFTSYEYPRISHAQYLDVHGTMGLPVFERGNYSCLGVIELIMTKQKLNFTSELNTICSALQAVNLTSTEVSSIPRTKLNSASYKDALPEILEVLRAACITHKLPLAQTWVTCAQQGKRGSRHSDENYKYCISTIDAACYVNEPRMQSFHEACSEHHLLRGQGVAGKAFTTNQPCFLPDIGSSTKLEYPLSHHAKIFNLKGAVAIRLRCTRTGIADFVLEFFLPTDCEVLEEQKAVLDSLSGTMRSVCQTLRVVTDKEMEDEAMREMNELNSFSPRGKNKVEELSFGDNTRGDREEASWTTLVGTSQKGSDLAELHTHGMLSHGGHGSSQAGDQTSKEGSKVKRRTKTEKTVSLQVLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGINRWPSRKIKKVDHSLRKLQQIIDSVHGAETAFQLNTLYKDLTNTSVSSDNNLSGSVTVPLANQNNLDFEMHQHHRLSSNIPSTSLSHSSCSQSSDSSPSCSGGATKHSPQVGADQVRSGCLPQHSPVQTLQTEAASINEHFSGQEAPIDLLQDVAEKANGEQHMSQSPSSPKQTANVGMRVKVTFGSEKVRFRLKPECDFQELKQEISKRLSIADMNSLIVKYLDDDSEWVLMTCDADLHECFHVYKLADIQTIKISVHLAASPTTRITIGHTGFS |
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| Function | Protein NLP1 [UniProtKB/Swiss-Prot:Q10S83] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_09g0018830 | OsIR64_09g0018830.01 | Chr09 | 23131646 | 23136803 | + | NAM | ||
| CDS seq | ATGGAAGAGGGAGACCCCCAGCCCAGCATCTCCTTGGCACGCACTCCGTCGGAAGGCGCGGCGGCGGCAGTCGACTTGGATCTCCTTGAGCAGCTTCTCTCAGCCGACAACGCCTGGCTTGAAGTGGCAGCAAACACTTCACGCTCACCCAACTTCTTTGCTACCCCCTCCAACTGCTTGACAGATGCTTCGGTCGCCACCACCACACCTGCAAATTCATGGTGGATTCAGCCGAGCGGTGCAAGCACCTCAGTTCGGGAACGGTTTGACCAAGCTCTAGCTTACATCAGGGAGACACAGAGAGACGCCGATGTGCTTGTGCAGCTCTGGGTGCCAGTCAAGGGCAACGATGGTCAGCTGGTGTTGACGACGAGCGGGCAGCCATTCACTCTCGATCAGAGGTCCAATAGCCTCATACAGTTCAGGGAGGTTTCGACAAAGTACCAGTTCTCTGCAGATGTTGCTTCAGGTTCCTCACCTGGGCTACCAGGGAGGGTGTTCATCGGTAGGCTTCCTGAATGGTCACCAGATGTTCGATACTTCACCAGCTATGAGTACCCTAGGATCAGCCATGCACAATATTTGGATGTCCACGGGACGATGGGGCTGCCGGTGTTTGAGAGGGGGAACTACTCATGCTTAGGTGTCATCGAGTTGATCATGACCAAGCAGAAGCTCAACTTCACCTCCGAGCTCAATACCATTTGCAGTGCTCTCCAGGCAGTTAACCTGACAAGCACAGAAGTTTCAAGCATTCCGCGCACAAAGCTTAACAGTGCTTCCTACAAAGATGCTTTACCAGAGATACTAGAAGTCCTGAGAGCAGCCTGCATCACCCACAAGCTACCATTAGCTCAGACCTGGGTCACATGTGCTCAACAAGGAAAGCGGGGCAGTCGCCATTCTGACGAGAACTACAAGTACTGCATTTCCACCATTGATGCAGCATGCTATGTGAATGAACCCCGGATGCAGAGCTTCCACGAGGCCTGCTCCGAACACCACCTGCTACGGGGGCAGGGGGTTGCAGGGAAAGCCTTCACCACAAACCAGCCATGCTTCCTACCAGATATTGGATCCTCCACTAAACTGGAGTACCCATTGTCTCACCATGCTAAGATTTTCAATTTAAAAGGTGCAGTGGCAATCCGATTGCGTTGCACGCGCACAGGGATTGCCGACTTTGTGCTAGAGTTCTTTCTGCCAACTGACTGTGAAGTACTTGAGGAGCAGAAGGCAGTGCTGGACTCATTATCAGGCACCATGAGAAGTGTTTGCCAAACTTTACGTGTTGTTACTGACAAGGAGATGGAGGATGAGGCCATGAGAGAAATGAATGAGCTGAACTCATTTAGTCCTCGGGGCAAGAACAAAGTTGAGGAGTTATCCTTTGGAGACAACACAAGAGGGGATAGAGAGGAGGCATCTTGGACAACCTTAGTAGGGACTTCACAGAAAGGATCAGATTTAGCTGAATTGCATACACATGGAATGTTATCACATGGAGGGCATGGTTCATCTCAAGCTGGTGATCAAACAAGTAAAGAAGGTAGCAAAGTGAAAAGGCGTACAAAGACGGAGAAGACCGTGAGCTTGCAGGTCCTTCGGCAGTACTTTGCTGGGAGCCTGAAGGATGCAGCAAAGAGCCTTGGAGTGTGCCCAACCACCCTGAAAAGAATATGCAGGCAGCATGGCATAAACCGCTGGCCATCACGGAAGATAAAGAAAGTAGACCATTCTCTAAGGAAACTGCAGCAAATCATTGATTCAGTTCATGGAGCAGAGACAGCTTTCCAGCTTAACACCCTCTACAAGGACCTCACAAACACCTCTGTATCATCTGACAACAATTTGTCAGGAAGTGTCACAGTTCCTCTGGCTAACCAGAACAATCTAGACTTTGAAATGCACCAACACCACAGGTTAAGCAGCAATATTCCATCGACTTCACTCTCACACTCATCATGCAGCCAAAGTTCCGATTCAAGCCCTTCCTGCAGTGGAGGAGCAACAAAACATTCACCCCAGGTTGGAGCTGATCAGGTGAGGTCAGGATGTCTTCCACAACATAGCCCTGTCCAGACTCTGCAAACAGAAGCTGCTTCAATAAATGAACATTTCTCAGGTCAGGAAGCACCAATAGATCTCTTACAGGATGTTGCTGAAAAGGCAAATGGTGAACAGCACATGTCTCAAAGTCCATCATCCCCCAAGCAGACTGCAAATGTAGGTATGAGAGTAAAGGTCACTTTTGGCTCAGAAAAGGTGAGGTTCAGATTGAAACCTGAGTGTGACTTTCAAGAACTGAAGCAGGAGATATCAAAACGTCTGAGTATAGCAGACATGAATTCCTTGATTGTAAAGTATTTGGATGACGATTCAGAATGGGTCTTGATGACATGTGATGCAGATTTACACGAGTGTTTTCATGTTTATAAACTAGCAGATATCCAAACAATCAAGATTTCAGTTCATCTGGCTGCTAGTCCAACAACAAGGATCACCATTGGTCACACTGGTTTCTCATGA
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| Protein seq | MEEGDPQPSISLARTPSEGAAAAVDLDLLEQLLSADNAWLEVAANTSRSPNFFATPSNCLTDASVATTTPANSWWIQPSGASTSVRERFDQALAYIRETQRDADVLVQLWVPVKGNDGQLVLTTSGQPFTLDQRSNSLIQFREVSTKYQFSADVASGSSPGLPGRVFIGRLPEWSPDVRYFTSYEYPRISHAQYLDVHGTMGLPVFERGNYSCLGVIELIMTKQKLNFTSELNTICSALQAVNLTSTEVSSIPRTKLNSASYKDALPEILEVLRAACITHKLPLAQTWVTCAQQGKRGSRHSDENYKYCISTIDAACYVNEPRMQSFHEACSEHHLLRGQGVAGKAFTTNQPCFLPDIGSSTKLEYPLSHHAKIFNLKGAVAIRLRCTRTGIADFVLEFFLPTDCEVLEEQKAVLDSLSGTMRSVCQTLRVVTDKEMEDEAMREMNELNSFSPRGKNKVEELSFGDNTRGDREEASWTTLVGTSQKGSDLAELHTHGMLSHGGHGSSQAGDQTSKEGSKVKRRTKTEKTVSLQVLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGINRWPSRKIKKVDHSLRKLQQIIDSVHGAETAFQLNTLYKDLTNTSVSSDNNLSGSVTVPLANQNNLDFEMHQHHRLSSNIPSTSLSHSSCSQSSDSSPSCSGGATKHSPQVGADQVRSGCLPQHSPVQTLQTEAASINEHFSGQEAPIDLLQDVAEKANGEQHMSQSPSSPKQTANVGMRVKVTFGSEKVRFRLKPECDFQELKQEISKRLSIADMNSLIVKYLDDDSEWVLMTCDADLHECFHVYKLADIQTIKISVHLAASPTTRITIGHTGFS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_09g0018830 | OsIR64_09g0018830.02 | Chr09 | 23131646 | 23136803 | + | NAM | ||
| CDS seq | ATGGAAGAGGGAGACCCCCAGCCCAGCATCTCCTTGGCACGCACTCCGTCGGAAGGCGCGGCGGCGGCAGTCGACTTGGATCTCCTTGAGCAGCTTCTCTCAGCCGACAACGCCTGGCTTGAAGTGGCAGCAAACACTTCACGCTCACCCAACTTCTTTGCTACCCCCTCCAACTGCTTGACAGATGCTTCGGTCGCCACCACCACACCTGCAAATTCATGGTGGATTCAGCCGAGCGGTGCAAGCACCTCAGTTCGGGAACGGTTTGACCAAGCTCTAGCTTACATCAGGGAGACACAGAGAGACGCCGATGTGCTTGTGCAGCTCTGGGTGCCAGTCAAGGGCAACGATGGTCAGCTGGTGTTGACGACGAGCGGGCAGCCATTCACTCTCGATCAGAGGTCCAATAGCCTCATACAGTTCAGGGAGGTTTCGACAAAGTACCAGTTCTCTGCAGATGTTGCTTCAGGTTCCTCACCTGGGCTACCAGGGAGGGTGTTCATCGGTAGGCTTCCTGAATGGTCACCAGATGTTCGATACTTCACCAGCTATGAGTACCCTAGGATCAGCCATGCACAATATTTGGATGTCCACGGGACGATGGGGCTGCCGGTGTTTGAGAGGGGGAACTACTCATGCTTAGGTGTCATCGAGTTGATCATGACCAAGCAGAAGCTCAACTTCACCTCCGAGCTCAATACCATTTGCAGTGCTCTCCAGGCAGTTAACCTGACAAGCACAGAAGTTTCAAGCATTCCGCGCACAAAGCTTAACAGTGCTTCCTACAAAGATGCTTTACCAGAGATACTAGAAGTCCTGAGAGCAGCCTGCATCACCCACAAGCTACCATTAGCTCAGACCTGGGTCACATGTGCTCAACAAGGAAAGCGGGGCAGTCGCCATTCTGACGAGAACTACAAGTACTGCATTTCCACCATTGATGCAGCATGCTATGTGAATGAACCCCGGATGCAGAGCTTCCACGAGGCCTGCTCCGAACACCACCTGCTACGGGGGCAGGGGGTTGCAGGGAAAGCCTTCACCACAAACCAGCCATGCTTCCTACCAGATATTGGATCCTCCACTAAACTGGAGTACCCATTGTCTCACCATGCTAAGATTTTCAATTTAAAAGGTGCAGTGGCAATCCGATTGCGTTGCACGCGCACAGGGATTGCCGACTTTGTGCTAGAGTTCTTTCTGCCAACTGACTGTGAAGTACTTGAGGAGCAGAAGGCAGTGCTGGACTCATTATCAGGCACCATGAGAAGTGTTTGCCAAACTTTACGTGTTGTTACTGACAAGGAGATGGAGGATGAGGCCATGAGAGAAATGAATGAGCTGAACTCATTTAGTCCTCGGGGCAAGAACAAAGTTGAGGAGTTATCCTTTGGAGACAACACAAGAGGGGATAGAGAGGAGGCATCTTGGACAACCTTAGTAGGGACTTCACAGAAAGGATCAGATTTAGCTGAATTGCATACACATGGAATGTTATCACATGGAGGGCATGGTTCATCTCAAGCTGGTGATCAAACAAGTAAAGAAGGTAGCAAAGTGAAAAGGCGTACAAAGACGGAGAAGACCGTGAGCTTGCAGGTCCTTCGGCAGTACTTTGCTGGGAGCCTGAAGGATGCAGCAAAGAGCCTTGGAGTGTGCCCAACCACCCTGAAAAGAATATGCAGGCAGCATGGCATAAACCGCTGGCCATCACGGAAGATAAAGAAAGTAGACCATTCTCTAAGGAAACTGCAGCAAATCATTGATTCAGTTCATGGAGCAGAGACAGCTTTCCAGCTTAACACCCTCTACAAGGACCTCACAAACACCTCTGTATCATCTGACAACAATTTGTCAGGAAGTGTCACAGTTCCTCTGGCTAACCAGAACAATCTAGACTTTGAAATGCACCAACACCACAGGTTAAGCAGCAATATTCCATCGACTTCACTCTCACACTCATCATGCAGCCAAAGTTCCGATTCAAGCCCTTCCTGCAGTGGAGGAGCAACAAAACATTCACCCCAGGTTGGAGCTGATCAGGTGAGGTCAGGATGTCTTCCACAACATAGCCCTGTCCAGACTCTGCAAACAGAAGCTGCTTCAATAAATGAACATTTCTCAGGTCAGGAAGCACCAATAGATCTCTTACAGGATGTTGCTGAAAAGGCAAATGGTGAACAGCACATGTCTCAAAGTCCATCATCCCCCAAGCAGACTGCAAATGTAGGTATGAGAGTAAAGGTCACTTTTGGCTCAGAAAAGGTGAGGTTCAGATTGAAACCTGAGTGTGACTTTCAAGAACTGAAGCAGGAGATATCAAAACGTCTGAGTATAGCAGACATGAATTCCTTGATTGTAAAGTATTTGGATGACGATTCAGAATGGGTCTTGATGACATGTGATGCAGATTTACACGAGTGTTTTCATGTTTATAAACTAGCAGATATCCAAACAATCAAGATTTCAGTTCATCTGGCTGCTAGTCCAACAACAAGGATCACCATTGGTCACACTGGTTTCTCATGA
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| Protein seq | MEEGDPQPSISLARTPSEGAAAAVDLDLLEQLLSADNAWLEVAANTSRSPNFFATPSNCLTDASVATTTPANSWWIQPSGASTSVRERFDQALAYIRETQRDADVLVQLWVPVKGNDGQLVLTTSGQPFTLDQRSNSLIQFREVSTKYQFSADVASGSSPGLPGRVFIGRLPEWSPDVRYFTSYEYPRISHAQYLDVHGTMGLPVFERGNYSCLGVIELIMTKQKLNFTSELNTICSALQAVNLTSTEVSSIPRTKLNSASYKDALPEILEVLRAACITHKLPLAQTWVTCAQQGKRGSRHSDENYKYCISTIDAACYVNEPRMQSFHEACSEHHLLRGQGVAGKAFTTNQPCFLPDIGSSTKLEYPLSHHAKIFNLKGAVAIRLRCTRTGIADFVLEFFLPTDCEVLEEQKAVLDSLSGTMRSVCQTLRVVTDKEMEDEAMREMNELNSFSPRGKNKVEELSFGDNTRGDREEASWTTLVGTSQKGSDLAELHTHGMLSHGGHGSSQAGDQTSKEGSKVKRRTKTEKTVSLQVLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGINRWPSRKIKKVDHSLRKLQQIIDSVHGAETAFQLNTLYKDLTNTSVSSDNNLSGSVTVPLANQNNLDFEMHQHHRLSSNIPSTSLSHSSCSQSSDSSPSCSGGATKHSPQVGADQVRSGCLPQHSPVQTLQTEAASINEHFSGQEAPIDLLQDVAEKANGEQHMSQSPSSPKQTANVGMRVKVTFGSEKVRFRLKPECDFQELKQEISKRLSIADMNSLIVKYLDDDSEWVLMTCDADLHECFHVYKLADIQTIKISVHLAASPTTRITIGHTGFS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr09 | 23131791 | 23132103 | + | OsIR64_09g0018830.01 | OsIR64_09g0018830.02,OsIR64_09g0018830.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.128975 | 0.744818 | 1.307780 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0549450 | RBH | 1.675986 | 1.990505 | 3.320187 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g37710 | RBH | 1.084378 | 1.294992 | 0.908092 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0549450 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0018830 | RBH | 0.108217 | 5.226875 | 3.861164 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0018910 | RBH | 0.647886 | 2.860107 | 1.918990 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0019120 | RBH | 0.595489 | 13.304216 | 9.853669 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0018890 | RBH | 0.187759 | 0.216729 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0019060 | RBH | 9.904552 | 11.352179 | 10.583805 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0368000 | RBH | 2.232435 | 5.795518 | 1.6840505 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0354300 | RBH | 3.373137 | 2.315976 | 3.508836 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0018930 | RBH | 0.431661 | 0.236296 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0018690 | RBH | 0.796660 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0018680 | RBH | 4.025741 | 21.570032 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0018670 | RBH | 0.480876 | 0.0 | 0.557549 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0018810 | RBH | 0.307692 | 2.757302 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G019220 | RBH | 0.441350 | 0.486797 | 1.759228 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0019040 | RBH | 0.541285 | 7.758831 | 5.734953 |
