Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_08g0023790 | OGI:10009590 | 10/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr08:28815143-28818899 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GAAAGATAGCGCATACATAGGTGCACTTTGATATGTCAATGATGATTTATCGATTACATGGTACATTATTTCATAGAGCACCAATATACATAAGACACAAAGAGGGGGAAAATAACTGTAGTAAGAACCCATTCAGACAGTACAGACCCAATATTCCAAGCTTCTTATCCTATTCCAATCCACAAAAGAAGTACAATAGCATGATGGCTGCCTGGTCGTGCAAACATGAAAGGGCTGTACCTACGTTGGAAAATATAGCTCACATAATAGTTTCTTTACAAAGCAGTCTTGATCGAACAGTCAGAACATCAAACCAAATAGAATGAACATAAAAGAAGAATATATGGAAATTTGTAATAACAAGAATGATTATTGGTACGCATCACCATCGTTTTGCCATGCTCCTGTGACATAAACCCTAAAAAAGTGTTTGTGCTCTAGAATAACATAAGACCAAGGCCGTTGTGATTTGTTAATGTTTTATAAAGAAATCATATTAGTTATTTAGTGGGCAACCAAGATTTATATCAAACCTTTGAAATTACACCATCGTATGGGTATTGTTTAGCAATGATACACATAAATCACTATAAGTATACTATGTGAGCACACATCAAACCCTAGAGCAGGGTAAGGATGAGAAGTTCAATGTAACTCCTAGGAGTAGTATAAAAGAATTAGAACTTAGAAGAGAACGGTGCAAACAAGAATAAGAATCTCATGATGCTAAGTTTCTTCTTAGCATCTCACCTTTTCCTTTTCAAAGAAGTAAGAGCAACTCCGGTGTATTGAACAAGGTAACAAATCAAGTATAATCACCCTTTGTAGCGCACTCATGATCAACTTTTGGTTTGGGCACAGAATCAACACGAAAAATTGCTAAATATTTTTCATGTGGCAGTTTAGCATCCTTTAGAATTTCAACTTCAAATTCAATGTTTCAGAAGAGGCAAACATAAATAGTGAAACGCCTGCCCAAGGATAAAACTTGATAGGAGGTAATAATCACGGACAAAAAATTGCATCAGCCTTTAGTCCCAAGCAAGCTAGGGTAGCTAAAGATCAAACCCAAGGCAAAACGCATGAACCAAAAGGGAACAGATAATGTACTAATAAAGTAGGATAACACAACATATGAGCTGAGAATGGCTAACATCAACGAATAGGATTCTTCAGTCATTTATGGGTTTGGACTCAAAAAGCAGCATTACCTGGGAATAATAGTTAAATTTATCAACCCATCTAATCGAACGTGCATGTGGTTACTTCATTGCGTGCTATGAATGCTGTTCCTGGTATATATTGCGTTAACACTTAAATACACAGGTACACAGGTCTTAAAAAAAGAGCACATAGGAACCAACTGACCTGGTGCATCTAGGCCGCCTCAACTAAATGTGTTCCATACTCCTGAAGCATCTCATAGAGTAACAGGAAAACTTCCGACCAGTCTTTACGACTTGAGCAGTTTTCATCTGATTGGCTCGTTTCTCCGATGCCAAGGGATCTGGCCTCTTTCTGAGCCCACCTCTCTCTTTTTGTCATTGCAGTATTTGGTTTGTCTTGAGCAGGCAGAGCGGCGGACCTCCTCCTGGAGCATTGCTGAGCGGCATCATTCTCAGATGAGGGAAAGATGTCTAGTGATATTCTCAAGATGTACAAAGCCTGCTTCCTCACTAAAGAATCCTTGTCAACCTGGTGTGAAGAGGCTAAGCATGTCGGCACAATCAACAGGATGAGTATAAAGACTAAAAGGCTAACAGAAACTGAGTCGGGGCAGAAAGGCCCACCAGTCCCCTGCGAATTTCATCCCAAAATTCATTGGAATTCCTAAGATCATAGTCTTGGGGGGCTCGTCAGGTACCGAGAAAACATATTTCAGTGTTGACAAGTAGAGAAAGAGAGAGTATGTTATAAGCATCCAGGCGCTCAGCAGGCCTCAGTGCAAAGAGAGAATGGCACGAGGCCCATATAGACTCCAAGAAGCCAGACCTGCACGAGACAAACCATCAATATTAACATGAACAGCATATATACTCCAGGTCAACCTTGAGAGCTGATGAGGAGCAGGCCAACCTTGAGAGCTTAGGCTGATGAGGTGCACCTAACTCCAGGTCCATAAAGAGGATTGATGATACATGACATGAGGTGAGTACCTTGTATGTGATCCAATGTACTTAAGGCTGAGAATTCGAGAGCTTTGGCTGTCCAAGACACGACCAGCGCCAGGAATGTCCTGCACTGCAGAACTTCTGCACAGTACAGTGCGTGTTTAGCATGCTTTCTTGCAACAATTCATCCACCATGCATTACTTTTCAGTAAACGGATTACACAAAAACAAAACTGGGAGCAAGGTCATCAGACCTGTTAATTATCACATAAGATCTCTTCCAATCCTGACTGAATCTGAAGTAAAATATGCAAGAAACAACTCTAATTAAGTACCAACAAGAAGCCTAAACAAAAACCGTAGATCCATAAAGTCATAGAGAGGATTTGATGCTACATGACATGAAAATATGAGATGAGTACTTTCTATGCGATTCAGTGTACTCAAGGCTGGGAACGCCAGTCCAAGAAATTTTCTTTTAAAAAAATGTGTTGGCTAGAAGGAGCTAGCTAGCCAACCGATGGAATTAAGATAGGAAGAGTCACATATTTTCAATCCTTCATTTGATCCAGACGAAAGGTGAAGAGTTTAGGAGTGTTGACAACTGAACGCATGTGCCAACTGCACCGTAAACACATCTCCTAGTCCAAGAATTTCCTAGGCAAGAGAGAGCTGAGCTGTGCATGTTTAACATGCTGCCTTGCAAGTTGCAATCATTTATCCGCCATGCATTATTTTGCTCTTCACTAATTCTATGTCATGATAGGAAAACAAAAGTGGGAGAAAGACTATCATACCTGCGAATCACCAAATAAGATCTGTAATCTCTTTCAGTCCTGACGAGCACGGAGCACCTGGAACAAGTTGAGTTTTTGAAACCAGCGAAGAGCTAATGCGGCACAGGCGCACAGCTGCTTCTCTCCGCCCTCCCGCCGCCACCGCATCGTGCAGAGGATAGGGTAAAGGGTGTACGGACAAGTCGAGGGAGCACGACACCATCCCCGGCGCCAGAGCCCGGAGCGAGGGTAGCCACCAGATCGGGCACCGAGCGGATTGGAGAGCGTGAAGGAGAGGGAAGCGGTGGGCGAGGATGTGCGAGTCGGAGGAGGCGCAGTGATGCACGTACCTGGCATACCAGCTGTTCTTGGGATGTATCGCCCTCGGCTCCCGTGGCAGCGCGATGTCCACGGACTCGCGCGAGGCAGGGGAGGGCGGACGACAGTCCCGCGCCGGCGGCCGATCCGACGCCGCCCTAAGGGGGAGGGGCATCGGCAGCGGATGCGGATGCGCGACGGGTTCCGCCGCCCCCGTAGGTCCCTCGTCGCCGTCGCCACAGAGGGGGAGACAATAAAGAGGGGGGCACCGGTGGTGGATTTGACATGCGCCTCACCCGCCCTCCCGCCGCCACCACATCGTGCAGAGGATAGGGTTAGGGGTGCACGGAGAAGTCGAGGGAGCACGAGCACCATCCCCGGCGCCAGAGCCCGGAGCGAGGGCAGCCAGATCCACCGGTGGGGAGGCCTAGACCATCAGCTCCGGCCGCCCTCGAACCAGATCGGGCACCGAGCGGAGTGGAGAGAGCGTGAAGGAGAGGGAAGTGGTGGGCGCGTGGAGATGAAAGGGGAGAAGAGGGAAGCGACGGCCAT
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| CDS seq | ATGGCCGTCGCTTCCCTCTTCTCCCCTTTCATCTCCACGCGCCCACCACTTCCCTCTCCTTCACGCTCTCTCCACTCCGCTCGGTGCCCGATCTGGTGCTCCGTGCTCGTCAGGACTGAAAGAGATTACAGATCTTATTTGGTGATTCGCAGATTCAGTCAGGATTGGAAGAGATCTTATGTGATAATTAACAGAAGTTCTGCAGTGCAGGACATTCCTGGCGCTGGTCGTGTCTTGGACAGCCAAAGCTCTCGAATTCTCAGCCTTAAGTACATTGGATCACATACAAGGTCTGGCTTCTTGGAGTCTATATGGGCCTCGTGCCATTCTCTCTTTGCACTGAGGCCTGCTGAGCGCCTGGATGCTTATAACATACTCTCTCTTTCTCTACTTGTTGACAAGGATTCTTTAGTGAGGAAGCAGGCTTTGTACATCTTGAGAATATCACTAGACATCTTTCCCTCATCTGAGAATGATGCCGCTCAGCAATGCTCCAGGAGGAGGTCCGCCGCTCTGCCTGCTCAAGACAAACCAAATACTGCAATGACAAAAAGAGAGAGGTGGGCTCAGAAAGAGGCCAGATCCCTTGGCATCGGAGAAACGAGCCAATCAGATGAAAACTGCTCAAGTCGTAAAGACTGGTCGGAAGTTTTCCTGTTACTCTATGAGATGCTTCAGGAGTATGGAACACATTTAGTTGAGGCGGCCTAG
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| Protein seq | MAVASLFSPFISTRPPLPSPSRSLHSARCPIWCSVLVRTERDYRSYLVIRRFSQDWKRSYVIINRSSAVQDIPGAGRVLDSQSSRILSLKYIGSHTRSGFLESIWASCHSLFALRPAERLDAYNILSLSLLVDKDSLVRKQALYILRISLDIFPSSENDAAQQCSRRRSAALPAQDKPNTAMTKRERWAQKEARSLGIGETSQSDENCSSRKDWSEVFLLLYEMLQEYGTHLVEAA |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_08g0023790 | OsIR64_08g0023790.01 | Chr08 | 28815143 | 28818899 | - | NAM | ||
| CDS seq | ATGGCCGTCGCTTCCCTCTTCTCCCCTTTCATCTCCACGCGCCCACCACTTCCCTCTCCTTCACGCTCTCTCCACTCCGCTCGGTGCCCGATCTGGTGCTCCGTGCTCGTCAGGACTGAAAGAGATTACAGATCTTATTTGGTGATTCGCAGATTCAGTCAGGATTGGAAGAGATCTTATGTGATAATTAACAGAAGTTCTGCAGTGCAGGACATTCCTGGCGCTGGTCGTGTCTTGGACAGCCAAAGCTCTCGAATTCTCAGCCTTAAGTACATTGGATCACATACAAGGTCTGGCTTCTTGGAGTCTATATGGGCCTCGTGCCATTCTCTCTTTGCACTGAGGCCTGCTGAGCGCCTGGATGCTTATAACATACTCTCTCTTTCTCTACTTGTTGACAAGGATTCTTTAGTGAGGAAGCAGGCTTTGTACATCTTGAGAATATCACTAGACATCTTTCCCTCATCTGAGAATGATGCCGCTCAGCAATGCTCCAGGAGGAGGTCCGCCGCTCTGCCTGCTCAAGACAAACCAAATACTGCAATGACAAAAAGAGAGAGGTGGGCTCAGAAAGAGGCCAGATCCCTTGGCATCGGAGAAACGAGCCAATCAGATGAAAACTGCTCAAGTCGTAAAGACTGGTCGGAAGTTTTCCTGTTACTCTATGAGATGCTTCAGGAGTATGGAACACATTTAGTTGAGGCGGCCTAG
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| Protein seq | MAVASLFSPFISTRPPLPSPSRSLHSARCPIWCSVLVRTERDYRSYLVIRRFSQDWKRSYVIINRSSAVQDIPGAGRVLDSQSSRILSLKYIGSHTRSGFLESIWASCHSLFALRPAERLDAYNILSLSLLVDKDSLVRKQALYILRISLDIFPSSENDAAQQCSRRRSAALPAQDKPNTAMTKRERWAQKEARSLGIGETSQSDENCSSRKDWSEVFLLLYEMLQEYGTHLVEAA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_08g0023790 | OsIR64_08g0023790.02 | Chr08 | 28815143 | 28818722 | - | NAM | ||
| CDS seq | ATGGTGCTCTCCGTGGACATCGCGCTGCCACGGGAGCCGAGGGCGATACATCCCAAGAACAGCTGGTATGCCAGGTGCTCCGTGCTCGTCAGGACTGAAAGAGATTACAGATCTTATTTGGTGATTCGCAGAAGTTCTGCAGTGCAGGACATTCCTGGCGCTGGTCGTGTCTTGGACAGCCAAAGCTCTCGAATTCTCAGCCTTAAGTACATTGGATCACATACAAGGTCTGGCTTCTTGGAGTCTATATGGGCCTCGTGCCATTCTCTCTTTGCACTGAGGCCTGCTGAGCGCCTGGATGCTTATAACATACTCTCTCTTTCTCTACTTGTTGACAAGGATTCTTTAGTGAGGAAGCAGGCTTTGTACATCTTGAGAATATCACTAGACATCTTTCCCTCATCTGAGAATGATGCCGCTCAGCAATGCTCCAGGAGGAGGTCCGCCGCTCTGCCTGCTCAAGACAAACCAAATACTGCAATGACAAAAAGAGAGAGGTGGGCTCAGAAAGAGGCCAGATCCCTTGGCATCGGAGAAACGAGCCAATCAGATGAAAACTGCTCAAGTCGTAAAGACTGGTCGGAAGTTTTCCTGTTACTCTATGAGATGCTTCAGGAGTATGGAACACATTTAGTTGAGGCGGCCTAG
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| Protein seq | MVLSVDIALPREPRAIHPKNSWYARCSVLVRTERDYRSYLVIRRSSAVQDIPGAGRVLDSQSSRILSLKYIGSHTRSGFLESIWASCHSLFALRPAERLDAYNILSLSLLVDKDSLVRKQALYILRISLDIFPSSENDAAQQCSRRRSAALPAQDKPNTAMTKRERWAQKEARSLGIGETSQSDENCSSRKDWSEVFLLLYEMLQEYGTHLVEAA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_08g0023790 | OsIR64_08g0023790.03 | Chr08 | 28815143 | 28818722 | - | NAM | ||
| CDS seq | ATGGTGCTCTCCGTGGACATCGCGCTGCCACGGGAGCCGAGGGCGATACATCCCAAGAACAGCTGGTATGCCAGGTGCTCCGTGCTCGTCAGGACTGAAAGAGATTACAGATCTTATTTGGTGATTCGCAGATTCAGTCAGGATTGGAAGAGATCTTATGTGATAATTAACAGAAGTTCTGCAGTGCAGGACATTCCTGGCGCTGGTCGTGTCTTGGACAGCCAAAGCTCTCGAATTCTCAGCCTTAAGTACATTGGATCACATACAAGGTCTGGCTTCTTGGAGTCTATATGGGCCTCGTGCCATTCTCTCTTTGCACTGAGGCCTGCTGAGCGCCTGGATGCTTATAACATACTCTCTCTTTCTCTACTTGTTGACAAGGATTCTTTAGTGAGGAAGCAGGCTTTGTACATCTTGAGAATATCACTAGACATCTTTCCCTCATCTGAGAATGATGCCGCTCAGCAATGCTCCAGGAGGAGGTCCGCCGCTCTGCCTGCTCAAGACAAACCAAATACTGCAATGACAAAAAGAGAGAGGTGGGCTCAGAAAGAGGCCAGATCCCTTGGCATCGGAGAAACGAGCCAATCAGATGAAAACTGCTCAAGTCGTAAAGACTGGTCGGAAGTTTTCCTGTTACTCTATGAGATGCTTCAGGAGTATGGAACACATTTAGTTGAGGCGGCCTAG
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| Protein seq | MVLSVDIALPREPRAIHPKNSWYARCSVLVRTERDYRSYLVIRRFSQDWKRSYVIINRSSAVQDIPGAGRVLDSQSSRILSLKYIGSHTRSGFLESIWASCHSLFALRPAERLDAYNILSLSLLVDKDSLVRKQALYILRISLDIFPSSENDAAQQCSRRRSAALPAQDKPNTAMTKRERWAQKEARSLGIGETSQSDENCSSRKDWSEVFLLLYEMLQEYGTHLVEAA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr08 | 28817394 | 28818051 | - | OsIR64_08g0023790.03,OsIR64_08g0023790.01 | OsIR64_08g0023790.03,OsIR64_08g0023790.01,OsIR64_08g0023790.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.473308 | 2.005122 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0009300 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0244200 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
