Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_08g0013910 | OGI:08014560 | 15/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr08:18888749-18889267 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCAACCAAACTTCACCACGGAATTCACTATTGAATCTAAGGAGCTTGAGCTCAACCCGAATGGCACACCCAGCGTGGATGCCACTGCCCGGAGACAAAGAGGAAGAAGGGTCCCAGATCCAGCCACCCTGATGCAGTGAAGAGCACAACCATCGACGAATGAACTGTTCTCTATAGCACAACGTTGGGGAAGAGCGGACTTGCACAAGGTGGAGCAGAAGCACCAGACTAACACCACCGACGCCGACATAGGCCACGACAGCGCAGTCATCGCCACCAGAGGCAGCAACAGCGCAGCCGCGGGCAGTATCAGTGCAGCCACCATCGCCTCGGGCCGCATTCGAGCCGCCGCCGCCACGGACCGCATCCGAGCAGCCGCCGCCGCCGTGGGCCGCATCCGAGCCACCGCCGCCGCCACGGACCGCATCCGAGCAGCCGCCGCCGCCGGGGGCCGCATCCGAGCCGCCGCCGCCGCCGCCGCCGCCGTGGACCGCTTCCAAGCCGCCGCCGCCGCTGTCAT
More
|
||||||||||
| CDS seq | ATGACAGCGGCGGCGGCGGCTTGGAAGCGGTCCACGGCGGCGGCGGCGGCGGCGGCGGCTCGGATGCGGCCCCCGGCGGCGGCGGCTGCTCGGATGCGGTCCGTGGCGGCGGCGGTGGCTCGGATGCGGCCCACGGCGGCGGCGGCTGCTCGGATGCGGTCCGTGGCGGCGGCGGCTCGAATGCGGCCCGAGGCGATGGTGGCTGCACTGATACTGCCCGCGGCTGCGCTGTTGCTGCCTCTGGTGGCGATGACTGCGCTGTCGTGGCCTATGTCGGCGTCGGTGGTGTTAGTCTGGTGCTTCTGCTCCACCTTGTGCAAGTCCGCTCTTCCCCAACGTTGTGCTATAGAGAACAGTTCATTCGTCGATGGTTGTGCTCTTCACTGCATCAGGGTGGCTGGATCTGGGACCCTTCTTCCTCTTTGTCTCCGGGCAGTGGCATCCACGCTGGGTGTGCCATTCGGGTTGAGCTCAAGCTCCTTAGATTCAATAGTGAATTCCGTGGTGAAGTTTGGTTGA
More
|
||||||||||
| Protein seq | MTAAAAAWKRSTAAAAAAAARMRPPAAAAARMRSVAAAVARMRPTAAAAARMRSVAAAARMRPEAMVAALILPAAALLLPLVAMTALSWPMSASVVLVWCFCSTLCKSALPQRCAIENSSFVDGCALHCIRVAGSGTLLPLCLRAVASTLGVPFGLSSSSLDSIVNSVVKFG |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_08g0013910 | OsIR64_08g0013910.01 | Chr08 | 18888749 | 18889267 | - | NAM | ||
| CDS seq | ATGACAGCGGCGGCGGCGGCTTGGAAGCGGTCCACGGCGGCGGCGGCGGCGGCGGCGGCTCGGATGCGGCCCCCGGCGGCGGCGGCTGCTCGGATGCGGTCCGTGGCGGCGGCGGTGGCTCGGATGCGGCCCACGGCGGCGGCGGCTGCTCGGATGCGGTCCGTGGCGGCGGCGGCTCGAATGCGGCCCGAGGCGATGGTGGCTGCACTGATACTGCCCGCGGCTGCGCTGTTGCTGCCTCTGGTGGCGATGACTGCGCTGTCGTGGCCTATGTCGGCGTCGGTGGTGTTAGTCTGGTGCTTCTGCTCCACCTTGTGCAAGTCCGCTCTTCCCCAACGTTGTGCTATAGAGAACAGTTCATTCGTCGATGGTTGTGCTCTTCACTGCATCAGGGTGGCTGGATCTGGGACCCTTCTTCCTCTTTGTCTCCGGGCAGTGGCATCCACGCTGGGTGTGCCATTCGGGTTGAGCTCAAGCTCCTTAGATTCAATAGTGAATTCCGTGGTGAAGTTTGGTTGA
More
|
|||||||
| Protein seq | MTAAAAAWKRSTAAAAAAAARMRPPAAAAARMRSVAAAVARMRPTAAAAARMRSVAAAARMRPEAMVAALILPAAALLLPLVAMTALSWPMSASVVLVWCFCSTLCKSALPQRCAIENSSFVDGCALHCIRVAGSGTLLPLCLRAVASTLGVPFGLSSSSLDSIVNSVVKFG |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0006250 | SBH | 0.692283 | 15.080943 | 13.838086 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0013860 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0013410 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0013480 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0005790 | SBH | 0.0 | 31.589426 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0013520 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0013680 | RBH | 0.0 | 0.0 | 0.0 |
