Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_08g0009110 | OGI:08028270 | 9/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr08:10276067-10277620 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CCAATAAAATTCAGTTCACATATGATACATTGCAAATACATATGGGCCGACCCATTCACATATTCCAATACAATCACAAGTTTGATAAAAAAAAAATAGATTACAAGGTAACTTGCCAAAACAAAATACATCAGTACATTGACCATGCATATCCAGCCATAAGTCACTGACCAAAACAAAGTCACATGTCCACATGGGCCGACCCAACCATGTCCAAATACAATCATAGGTTCACTTACCAAACACAATGTCACGTATCGAAATCACACCAACATACTGCCATCTCTTCATGAATCAGCAAGACAACAAACCTTACCTCTGAAATTACATGCAAACAATTTGTAAATGCATGTTTAGTTTCAGCTGCTGAAAGAGAAAATTTACAATATCTAATCTAAACTACTTATTTATGTACATAACCATGAACAAAGAATTCAAGTACACTGCAAACTACTTGAACAGATCAAAGGTAACTTATGCATAAAGTAGACCATGGAGTTATACTCATTTCTCATATAACAGTAAAAAAGAAGCGAAGCAATTTACTGGTATCTTACCATGGCATGTCAATGAGATCCTGTCCTTTGCTGTGTTTCACAGTTAAAAGGAACATGGAACAGTAGAATAGTATGGAACATTCTCATGGTTAAGTTTCTTTCACACTTGTCCTATAGAAAAGCAAACATTAGTAGCACAGTATTTGTAACCACAACCATACAAAACTTTGAACCCCCGCATGTGGCCATACAAAGCTTTGAACCCCTGCATTGCAAATTGAGGCACAGGCATAGGCATAGGCATTGCAAATTGAACATATAGTACTAGTAAGTACCTAAATAGAAAGAGAACATAGGCATAGCAAATCAAAACAATAGAGTTATACATGCCAAGACATGTGAGACATATGCATAGTAATGTAAGCCTACTGCAAGCAGAACCCCTCCCCCTTCCCTCTACGACAAAACAAACTGAATTGCAAACTCAATTGGATGTGTACGTAGTGCTTTATCGACAGATTTTCAGCCATTGTAACAGTAAAGTGTGGATGATAAAAAAAATCATATATGGTGAACACATATTATGAAGCTACTATTGGGTATGTTTTCGGTTCAGATTACAGGGTAGTTACATGGATCTGATTTCAGTAGAACCCAAACATGAAACCATGGCTAATTTTTTATGCTCTATTATTATATTGGATATGTGCTAGGAAGATTTCTGGGATGTGTGAAAGATTTAACTAATGTTCTGTAGTCATCATTAAGGTCATGATGCTACACAAAGCACTTCCAGCCCTATATATCTGATCACACTAACAAAATGCAGCTACAAGTACCCAACACATAAGTTATTTATATCAGAACTTAAAAGTACCCTTCTATGTAAAAGCTAACATCCCAAAGAGAATAAGAATCACCTTTGTCATAAAAGGTGAGCACATGTAATTATACAAGACCAAAAAGTTGTAATTTAAACAGAAGTGCTGAGACTATTGTTTATATAGATAGCTAGATCATTGTGCGTGCTAACCTTGGAAAAAAAGGAATAGTTTTC
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| CDS seq | ATGTATAACTCTATTGTTTTGATTTGCTATGCCTATGTTCTCTTTCTATTTAGGTACTTACTAGTACTATATGTTCAATTTGCAATGCCTATGCCTATGCCTGTGCCTCAATTTGCAATGCAGGGGTTCAAAGCTTTGTATGGCCACATGCGGGGGTTCAAAGTTTTGTATGGTTGTGGTTACAAATACTGTGCTACTAATGTTTGCTTTTCTATAGGACAAGTGTGA |
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| Protein seq | MYNSIVLICYAYVLFLFRYLLVLYVQFAMPMPMPVPQFAMQGFKALYGHMRGFKVLYGCGYKYCATNVCFSIGQV |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_08g0009110 | OsIR64_08g0009110.01 | Chr08 | 10276067 | 10277620 | - | NAM | ||
| CDS seq | ATGTATAACTCTATTGTTTTGATTTGCTATGCCTATGTTCTCTTTCTATTTAGGTACTTACTAGTACTATATGTTCAATTTGCAATGCCTATGCCTATGCCTGTGCCTCAATTTGCAATGCAGGGGTTCAAAGCTTTGTATGGCCACATGCGGGGGTTCAAAGTTTTGTATGGTTGTGGTTACAAATACTGTGCTACTAATGTTTGCTTTTCTATAGGACAAGTGTGA
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| Protein seq | MYNSIVLICYAYVLFLFRYLLVLYVQFAMPMPMPVPQFAMQGFKALYGHMRGFKVLYGCGYKYCATNVCFSIGQV |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.476039 | 0.060988 | 0.517025 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g16470 | RBH | 0.550602 | 0.683879 | 0.650468 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0009100 | RBH | 0.958199 | 3.957455 | 4.732653 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0009160 | RBH | 0.720405 | 1.180892 | 2.954280 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0009120 | RBH | 0.064601 | 0.066075 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0009070 | RBH | 10.383169 | 11.844017 | 4.067338 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0153500 | RBH | 3.5599875 | 3.5603225 | 10.243587 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0014510 | RBH | 0.0 | 0.000000 | 0.260011 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0014030 | SBH | 0.072881 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0009470 | RBH | 0.198730 | 0.671178 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G014170 | SBH | 0.447432 | 1.925169 | 2.174773 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0014330 | SBH | 0.0 | 0.0 | 0.000000 |
