Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_08g0008610 | OGI:03055200 | 14/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr08:9417447-9423117 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCAACTCGACGGTGATGTGGCTTGCAGCACAGGCAGATCGAAGAGGTTGATGGTTAGCTGCAAACAACAACGATATGTAATTAAATGTCCAACTCGATCTCCCGTGATTGCAATCACGAACACAGCTCCTTTCAATTTCAGAAGACGTCAAAACCCGGCCCCCCAAAAAATCCAGTTGAAACAACTACATGTAATCACGGAAGGAGTTTGTTTTAAGAAAAAAATAAATGAGGGTCAAATAGTCCGTGATCTGCCCTGCCTTTGACTCTCACGGCGCGTTTGATTGGAGAGAATTGTTAAGAAGGAATGAGAGTTTGAGGAATGATGATGACGCGTTTTGTTTGGTTGGTAGATATAGGAGTTTTAGAAATGATTGGGAAGGGGAATTTAAAAAAAAAAATTGTCATTCCTTCAATCCCAGGGAAACCCCCCTAATGATAGAAGCCTACTCAACCCATCAGAGACAATGGAATCATACAAGGCCGTTGATTGATGCCTCAACTTCTTGCACGTACATTAGCTGATCAGAAATCAGATGCCTCGCCCTCGACTCCACTTTGGCTTAGTGTAGTCTGCATGCGACGGCGACATGCGCAGCATATTCCTTCAATGCCAATCACCTCTCACCGTCGCCCATCACGAAGTCTCTGACTAGGAGTCCAACCATGTTGTCACTGGTGGGTGAGTTCTACCTAACCCTTATTTCACATTTATCTCTTTTCACATCAAAGATTTTTTTTTCCTATTTGAAATTAGGCAGTGTCGATGTTTTACTTGGGCCAGGCTTAGGCCTTGGAAAAAGCATACTAGTCAGGCTTGGTCGTGCTCGAGCTTGACCCCTACCAGACTTACCCTTCAAGTTCAAAATCATTAGCTTTACCCAATTAAAGTAGGGGCAGACTTATATTGGGCACGTTTGGCAGGCCGACAACTGCGGCTGCGCACAGTGAGTACGGCACTATTCATGCCGGGTGCAGCCCGGACAGCCACACAGGCCCATTTTCATCTTGATGACAAAGTGTGCGGACCATATGGCGACCAAACAAACCTAGCAAAAAGAAAAGCAACAGGCACACATGTCATCAACCCATCCTTTCTTCTTCCTTATCATATCTCTCTCATCTCTCCATTTCTCATCCCATCGCCACTTAACTGTTATTGCTAGAAAATTTATTACTTTTCGAATAATTTCAACTCTAATAAGGTGATAACTAACAAGATAGTTGCCTAGCACTAACAACATGATACACATAACAAACAAAATTTGAAGTCAAATCACTAAAACTGCATATGGCATATTAAAAATGCTAGAAGCCGAACCACTAAAATCACTTACCTAGGAGTGCCCTAACGATGTTTGAAGTAAAGTTTGAGTTCGACGAGTTAACAATCTTAGCGCGTAGGTCACAGATGAAACCAATGAAAATGTCACAAGCAAACATACACTACTAGGAAAATGATTTGTTGCCACGAAAAAAATCATGGCAACAATGCTAAAATCGTGGCAATAGATACATATTGCCACCATTTTAAAACCGTTGAAAGCCGTGGCAATAGAAACAGTAGCAATAGGTTATTGCAACAATTTTTATCTAGTGGCAACAAACTTTGATAATGCCACAAAATAATCGTGGCAAAAAAACATATTGCAACACTTAACATCGTTGCAACAAATAATTATTGCCACCACTTCGTGTGTGGCATTAGTTGTGCTTGCCACAAAATAGTTTCGTTGCAATATCTAATATATGTTATTGCCACATAGCATTAATCGTGGCAATATATCATATGGGTTATTGCCACTAAAATATTTTTGTGGCAATAAGTATTATTACAATGAAATGAATTTCTTCTAGCTTTTATAGAAAAGAAATTGTGTTACATCAGTAATTGGATGGATCATTTGGTACTATTGCAACATGAGTAGAAATATATGTTAAATGGCAAAACCCTTGCAACTCATGCGCACAAGAATTATGATGTCTGATATTTCCGCGAATAAGACATAATATATTTCAGATACCCAAAGTAATGATGACAATATGAGTATGTTAAATTTCCAAATGCTGAAATACAAGTTATCTGATAAAACTAAAAGTTCTGAAACTAATGAGTTTGTAACATTGTTGTCGAAACTAGCTTTTCTAGCCATCACTTGTTTGATTTTGTCGTGGTTTGCTCCAGCCATTCAAAAGTAACAGAGTTGATTGTTCCTCCTGTACAAATGTATGGACATATAGTTACAAGTCGTATTTAAAGTAAAGAAAGTCACCATGTAAAATGCAGAGCTATTTTATCTAGTTTTCTGCTAGCATGTATAGTTACCAAAACTTCATAATTTCTTCAAATAAAGGACATTGCCAGAGTCTGCAGTGCAACTAATTTTAGTATCTAACATGATTAAATTGAGTTAGAAGTCATATGCCATAACTATCATGCCACTGTATGGACATGTGTGTTCTTTGGATTGATGGAAACATAAACAAATGTGATTAGTGCTCACTATATCTGACATTTTTTAAGCCATGCCCCTGTTATTTACTGACTTGTGAGACCCACTGAAATATATATGCTTTGTTACATATGTGGTGGCTATATATAGTACTGTGTTGCTAATCATTTATATGGCATGCATGCTTATCTTAGTTAGCTCAGATAAACAAAACAAAGGCCTATGAGGCAGTAACAGAAGCTTAGATGCCCCATATACTAATAAACTAAACAGGCAACTGTTTTTGTCAGCAAAGGGGACGTGCCAAATACTAATACAATCCAATGAGTTAAGTAGCAAAAGTATCAGATCATTACCTGGATGCTACACCAAACCCCGAGCTGATTTAGATATTTCTTTCATTTATTCTTCCATTTTCTCCTCTGGCCTGTTACAGGATTTGGCCATACACAATAAGAAATTATTTTTTTTACAAACAGACCATGAGCAGGAAAACATATTGTAAAATTTTTTTGCAAAAGATCATTTCAACATAGCAGCTTGCTGAAGATTTGTAATTACCTGATCAGTTCGGGACCGTACAAAATTTCTAGCAACATTCCTAAGATGTTGTGAAGAAATATTTTGCCGGCTAGTACTTGTTGTTCCTTGCAAATTAGCGCTGTTAAAAAGTGCTTTCACAACTGTGTTGTTCTGAATGCTTCGAGCCTTCTTTGTTGTGTCATGTGGTTCTCTATTCTCAGTTGGACAATCTATTGCCAGATCAGACTTCACACCATAAAACAAGAAATATATATATTATGATTCCACATTTGACATATATAAGATATCAAATATTGGTGAATGTGAACATTTTGGCAATCATTACCTGTTGTTCCGATGCTACGCTTTGCGTAGTAATCATTTTGAGAATATCCTCCCGTAGCATTTCCCTTTCCTTACGTTCTTCTTCTTGCATTTTAAGCCTTGCATTCCGTTCTTCTTGTTCAAATCGAAGCCTTTCATTGCGCTCTACTTGAAGTGCCTTATCACTTTCTTCTTCTCGAGCTGCAAGTTTTGCTTTCAACTCCTCAACCTCAGAAGAGAGCTTATCATTCTGTTGCTGGGTTTCAGAAGTTACACGAGCTTGTTCATCCAATTTAGCATGCAACATTGCTGTAGTGGTTAGAGGTTTAGCCATGTAACCTTGTCCACGAGCTTGAGATGTTTTACAACCTGTAGAGTCCCTATAGCATGCTTGGAAAATAATGTTTTGCTCTTCATTTGTTATTGCATTTCCTGTATCTGCTTCTCTCTCACTGATCTCATTGTGTGCATTTTCCTAAGGGGAAAAGAATGCATATGTTACTCCAATGCACTACAATAGCGAACAATAAAATATTTCATAAGAGAATATTTCTTACATAGACATCCTTTGATGCAATGTTCGACCATTCACCATTCCTCATATGAGTAGCTTGCCATAAGTCAAGTATACTTGGCTCTTCCCCTGTTTCCTTATCTCTCTGTAAATACAAAGTTATACCATGTTAACAAATAGGTCATTTCTCATAGCAAAGATCACTAAAATACTAGATGTACCTTCTCATAGCTGGTCTGTGAAAAAGATTTCGCACCAGTAACATGAAGAGTCCTCTGCTTCTTACGGTTTTCAGAATTCTTTTGGCTCATCTCCTGTATCCATAAATAGAAGTAAGAGCATTGGAAGAAAACAAAAATTTACAAAATCAAATGTGTAAATCATATAACCTGGAATTTTTTATCAGTCCCAAAATAGTGTATCAGATATTCCCATTCCAGAATGTTTAGTTCTTCTGGCTTATTTTTAAATCGCAGACCATCCGTACTATATGCTTGGAATGTAGCATGCAAATTTGAGCGCCATCCTTTGTAACGCTCCCTTGCAATGTCCCTAATCTTGTTCCTTGTACTTATGGTGTCTGCGAGGTCCCACTTAGCCTGACAAGAGAGAAAGTAAATTAGTTTTAGCTATTTAGAAATGAACTGTGTTAATGACAATAAAGGCATTGTACTGACCAGCACATCAATAACTATAGATTTTTTCACTGTCTCATGTATATCTTTCCACTTTCTAACTCCAATTAGTGGTGCCTTCTTTTTTGTATACATAACAACTTCCTCTACGAAGGAGCGGTGGTTTATTCCTATGGGACCTCCCAATCTCGTAGAGAATTCAATTTGGAGTTTCTGAGAACCACTACTGAATCTTTTTTTAGCCACTTTAAAACCTTTATGTGTACCACGCCCTTTCTTGTGTGATTGGTCCATATCTGCAATTTATTAGAAATAGTTTGCATATTAAGACAATAGTTGTGTTGATGTTCCATACAAATGAAAAGGAACATATGAAATAATGATTTTGTAACCGTACTACCTTCTGATTGTGTACGACACCGTCGAGCATGAGATGGCCAATCTGTTGGTGATGGATTTGTATCGTTGGTTTCCAGATCATCAAGGTCACTATGTTGTTCAGAACTAACATTTGTTGATGAACACTGACCTGCAACAGATAGTTTTTTTAAAGTATATCATGAAAATGGCAATTAATATGAATATGCAGTGCATATGGTTGGGCAAAATAGTTACCCCTCTCTTGTTCCCTGCGTTTTCGGAGTGTATTTAATATTTGTACTCTAGCCTCTGAACTCTTGTATGCTTTGATTGAGTCCTCTCGGAATATTGCTGCGCATGCTATATGACAAAATATTTTTTAGTTAATTGCTGCACTTCTTGAATATAACGCTAACGACTTGATGGTACCACATTATTATGGAGTTGAGCACTGAAGTTAACTCAACAGAAATTAAGAGTTATCCAAGTATACTTACCTTCTCCAGCTTCATCTGATTCAGATCTAGCCATTTCATTCGAGGACTTGACAGGTGTTATGCTAACTCTACTATCCACGCATGCTTTCTCCCGCTTCACACATATTCTGACCTTCTTTTCACTTTCATGGGCTGCAACCATTCTTTGCACATCACTGTCAGTTTGTATTCCTACTAGAGTGGCCATTGAACTGCTCTCTCTCTTCTTGTAGTACATGTAGTCCAGTGCTGTGAACCCATATTCTTGAATCAAACCAATTAAGTTGAAAAAGCACAAAAGGTCCTTGTCCATTTCCCTCTGTACAAGTTCATGTTCTGGAGCTGCCCCATCGAGTTGAAGAATTATTGTCCAGGTGTCCTCGGCCAT
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| CDS seq | ATGGCCGAGGACACCTGGACAATAATTCTTCAACTCGATGGGGCAGCTCCAGAACATGAACTTGTACAGAGGGAAATGGACAAGGACCTTTTGTGCTTTTTCAACTTAATTGGTTTGATTCAAGAATATGGGTTCACAGCACTGGACTACATGTACTACAAGAAGAGAGAGAGCAGTTCAATGGCCACTCTAGTAGGAATACAAACTGACAGTGATGTGCAAAGAATGGTTGCAGCCCATGAAAGTGAAAAGAAGGTCAGAATATGTGTGAAGCGGGAGAAAGCATGCGTGGATAGTAGAGTTAGCATAACACCTGTCAAGTCCTCGAATGAAATGGCTAGATCTGAATCAGATGAAGCTGGAGAAGGTCAGTGTTCATCAACAAATGTTAGTTCTGAACAACATAGTGACCTTGATGATCTGGAAACCAACGATACAAATCCATCACCAACAGATTGGCCATCTCATGCTCGACGGTGTCGTACACAATCAGAAGCAATGTTGCATGCTAAATTGGATGAACAAGCTCGTGTAACTTCTGAAACCCAGCAACAGAATGATAAGCTCTCTTCTGAGGTTGAGGAGTTGAAAGCAAAACTTGCAGCTCGAGAAGAAGAAAGTGATAAGGCACTTCAACTAACCATCAACCTCTTCGATCTGCCTGTGCTGCAAGCCACATCACCGTCGAGTTGA
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| Protein seq | MAEDTWTIILQLDGAAPEHELVQREMDKDLLCFFNLIGLIQEYGFTALDYMYYKKRESSSMATLVGIQTDSDVQRMVAAHESEKKVRICVKREKACVDSRVSITPVKSSNEMARSESDEAGEGQCSSTNVSSEQHSDLDDLETNDTNPSPTDWPSHARRCRTQSEAMLHAKLDEQARVTSETQQQNDKLSSEVEELKAKLAAREEESDKALQLTINLFDLPVLQATSPSS |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_08g0008610 | OsIR64_08g0008610.01 | Chr08 | 9417447 | 9423117 | - | NAM | ||
| CDS seq | ATGGCCGAGGACACCTGGACAATAATTCTTCAACTCGATGGGGCAGCTCCAGAACATGAACTTGTACAGAGGGAAATGGACAAGGACCTTTTGTGCTTTTTCAACTTAATTGGTTTGATTCAAGAATATGGGTTCACAGCACTGGACTACATGTACTACAAGAAGAGAGAGAGCAGTTCAATGGCCACTCTAGTAGGAATACAAACTGACAGTGATGTGCAAAGAATGGTTGCAGCCCATGAAAGTGAAAAGAAGGTCAGAATATGTGTGAAGCGGGAGAAAGCATGCGTGGATAGTAGAGTTAGCATAACACCTGTCAAGTCCTCGAATGAAATGGCTAGATCTGAATCAGATGAAGCTGGAGAAGGTCAGTGTTCATCAACAAATGTTAGTTCTGAACAACATAGTGACCTTGATGATCTGGAAACCAACGATACAAATCCATCACCAACAGATTGGCCATCTCATGCTCGACGGTGTCGTACACAATCAGAAGCAATGTTGCATGCTAAATTGGATGAACAAGCTCGTGTAACTTCTGAAACCCAGCAACAGAATGATAAGCTCTCTTCTGAGGTTGAGGAGTTGAAAGCAAAACTTGCAGCTCGAGAAGAAGAAAGTGATAAGGCACTTCAACTAACCATCAACCTCTTCGATCTGCCTGTGCTGCAAGCCACATCACCGTCGAGTTGA
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| Protein seq | MAEDTWTIILQLDGAAPEHELVQREMDKDLLCFFNLIGLIQEYGFTALDYMYYKKRESSSMATLVGIQTDSDVQRMVAAHESEKKVRICVKREKACVDSRVSITPVKSSNEMARSESDEAGEGQCSSTNVSSEQHSDLDDLETNDTNPSPTDWPSHARRCRTQSEAMLHAKLDEQARVTSETQQQNDKLSSEVEELKAKLAAREEESDKALQLTINLFDLPVLQATSPSS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0028570 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0023580 | SBH | 6.775260 | 0.000000 | 10.427027 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0143400 | RBH | 0.0039685 | 0.0495845 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0022820 | SBH | 0.038780 | 0.000000 | 0.238491 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0339500 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0023100 | SBH | 0.685882 | 0.151131 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0008850 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0023030 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G005700 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
