Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_07g0004620 | OGI:07010870 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr07:4004290-4009525 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | AGCGACAGTAGGGCAGTAGTAGACGACACTAAGCATATGATTCCCTCACAAACCCCCAAAAAACATATATTATTTGGCCACATTTCATTTCACTCGCTGGCATTTCATCTCCTTGACCTATCCAATGCACTGTTCATCTTCAGTAGTTATGTTTTCTCAGTGACTGATAACAAGGTGAGGTTTCTTGCAAGTACTGTAGTTTAGTGATAGTGCTACAAATCTTGGTACACAAGTGATGCTTTGGTCTCTAACCTGATACTACTATAATTTTTGTTTTCTTCTCTCATGTTGCCAGTTCTTGAAGGAAAGAAGCAAATCTGGAGATGTTTCTGCTGCTGCAGTCATTGGCATCCAGTGCTTTCTTGCTTTGGGATGAAATGAATTAGTGGTCAGATAGATCCCTGTAGTAAAAGATTGGTCAATTTGGCACACATCATTTTTTTCAGGTCACCAGTAGCTATCTCTCCAATAACTGTAGTTCCTCTCAGCTCAGCCTTTTCTGAAGAGTTCAGTTGCTTGATGCCATCATGCTGTCCTTCAGCTAATCAATCTCTCCTTGCTCCTCCTCCCAGCATCAAATCTTCAGAAAATTCCCCCTTCTTCATCACATCACCAGAATCTATCACCTCTGTCACTGTTCTTGATCACAAAAAGTTAAGACAGATTTTGCTGTTCTTGCTATCTTCCCTGCTCTGCTCATCTCCTCTGCTCCAGTTCAGAAATTGCTGCTGGTTCTTGCACATTGGTGCTCATCAAGAACTGATCAGGAGCTGAAGAAATCTTGTGAGAAGCTGAAGAAATGGGAGGGAAGAATCTGGTGGTGTTGTTCTTGGTGTCGGTGGTGATGGCGATGGTGCCAGGGAGCACGCAGCTGCAGGCGTCGCAGACATGGTCGCTGCTCAAGATCCAGCAGATGCTCGGCTACCCGGCGGTGCTCGGCCACTGGCACAACTACACCGACTTCTGCTACGGCGGCGACTACAAGACCACGTCGGCGTTCGTCGAGTGCTACGGCGACAGCGTCACGCAGCTGCACATCATCGGCGGTGGCGGCGGCTCGCCGGCGCCGCCGCCGCTGCCCAAGACGTTCTCCATCGACTCCTTCTTCACCACGCTGTCGAGGCTCCCCGACCTCCGGGTGCTCACGCTCACCGGACTCGGACTCTGGGGCCCATTGCCCGGGAAGGTGTCGCGGCTCGCCGCGCTCGAGATCGTCAATGTCAGCGGCAACTACCTCTACGGCGAGCTCCCCCTCGCGCTGTCGCGGCTCGGCAACCTGCAGACGTTCATCGCCGACGACAACATGCTAAGCGGCGAGCTGCCGGCGTGGCTGGGGAGGCTGCCGGTGCTCGCCGTGCTGAGCCTGAGGAACAACTCGCTGGAGGGCACCTTGCCGGGGTCGGTGAGCGACATGGCGTCGCTGCGGTCGCTGTCGCTGGCGAGCAACAACCTGTCGGGCAACCTGCCGGACATGAGCGGCGCCAAGAACCTCCAGGTGATCGACCTCGCCAACAACTCGCTCGGGCCGGAGTTCCCGCGGCTCGGCCGGAAGGTGGCCAGCGTGGTGCTCGCCGGCAACAGGTTCAGCGACGGCCTCCCGCCGGAGCTCGCGTCGTTCTACCTCCTCGAGCGGCTCGACGTGTCCAGGAACAGGTTCGTCGGCCCGTTCATGCCGGCGCTGCTCTCTCTGCCGTCCATCGAGTACCTCAGCGTCGCCGGCAACCGCTTCACCGGCATGCTCTCCGGCAACATGTCGTGCGGCGACAACCTCAAATTCGTCGACGTCTCGTCCAACCTCCTCACGGGGAGCCTCCCGACCTGCCTCGCCGCCGGCGCCGTCGGCAAGGCGGCGGACTCCGACTCCGACTCCTCCAAGACGGTGCTCTTCTCGGCGAACTGCCTCGCCACCGGCGACGACACGCAGCACCCGTCCCCGTTCTGCAAGAACCAGGCCATCGCCGTCGGCATCGTGCCCGACCAGGCGCGGAGGAAGCCCAGCGGCGCCAGGTCCGGCCTCGTCGCCGGCGTCGTGGCGGCCGCCATTGCCGCCGCGGTGCTCGCCGGCGTGGCGGTCTTCCTCGCCGTGAGGAAGGCGAGCATGAGGAGGGCGCAGGCGAGGCCGCCACGGAGGCTCGTGGAGCACGCGTCGAGCGCCTATCCTTCCAAGCTCTTCGCCGATGCGCGTATGATCTTGCTCCCTGTCAATTTCTCTCTCAAACTTTTGCTGAATTTTTCGGATTTATTTACTGAAACTTTTACTGAATTTGAGATTCATTAGCTGAATCTTTGGCTGAATTTGAATCGTTAACTGAAACTTTGCTGAAATTCAGTTACTCACTGAAACTTTTGCTGAATTTTCAGATTCATTAACTGAATCTTTTGCTGAATTTTCAGATTCATTAACTGAATCTTTTGCTGAATTTCAGTCATTAGCTGGAACATTTGCTAAATTTCAGTCATTCATTGAAACTTTTGCTGAATTTCAGAGTCACCAACTTGGCACAATCTCTGAAACTTTTTCTGAATTTCAGATTCTTTGACTGAAACTTCTGTACATCTTTTGCTCTTTTTTAGATTCGTTAACTTTGGCATCATTTCTCTGGAACTTTGCCTAGTGTTAAGAGTAACTAACTTGATAGCACCATTTTTTTTCTGAAACTTTATTTGAAATACTAACTTCTTGTTGCATTTACCTGGAACAACCAAACAGGTTACATATCTCAGACAGTGAAATTGGGAGCTCTGGGAATTCCAGCATACAGATCATTTTCTTTGGTCGAGCTCGAAGCGGCTACTAATGATTTCGAAGTATCAAATATGATGGGGCAAGATTCTCACGGACAGGTACTCCTTGTACCATTGCTCCCACTGACAATCCAGGGACATTTTGTTCAGAATATCATTGCTGGATTAGTTATGGCCACTTCATCTTCACTGAACCTAATTTTTCATGTTCTTGTTAATTGACAGTATGCTTTATGCCCCCATTCACTTTTCTGATTATTCTAATGAGTTAAATACTACTGCTAGATTACAATTGGGGTATAAAGATTAAAGAGAACAGTTTTTATAGTTATTACAAGCTTTCTCTCTTTTTTCTTGTCAGAGTACCAAAGCCATCTTTCCATACATATTTTTCAATCTATTCAAGAATCACCTTTTCTTTTGAGGCATGTGCAAGTTGTAACATAGCAAGTTTGCAACTAAAATTGTTGTGCTCCATGTCTAAAATGGTTTGCTCTTTTTTACCGTCAGATGTACCGAGGAAGGCTAAGCAATGGAACTCCGGTGACAATCAGGTCTCTGAAGGTGAAGAGGAGCCAGACTTCCCAGAGCTTCAATCGCCACATTGAGATGATCTCCAAGCTCAGGCACAGGCACTTGGTCAGTGCACTTGGACACTGCTTCGAATACAATCTCGACGATTCCACCGTCACGCAATTGTATCTCGTCTTCGAATACGTTCAGAATGGCAACCTGAGAGGCAGAATTTCACGTAAGTTTACCATCTTCTCCTGAAATCGGTCTGCAATAATCAGTTACTCGGTTAGCTGAATGTCACTGAACTTGTTGATACTTTTGACTTCAGAAGGAACAGAAGGGAGAAAGCTCACCTGGGTGCAGAGGATATCAACAGCCATTGGTGTTGCCAAAGGAATTCAATTCTTGCATGGAGGGATCATACCTGGCCTATTTGCGAATAATCTGAAGATCACCAACATTCTTCTAGACCAGAATCTTGTTGCCAAAATAGGCAGCTACAATATCCCCATCCTATCTGAAACCATGAAATCCGAGGTATGATTCAGGAAACTCTGATCATGTAAACTTACCGCTGAATTTTGAGTTGGCACTGTCTGAACTCTGAACTAACATTGTTGTTTTATATCATCTTTTGTGGATGAATTCAGGGAGGATCTGGCAACAAGTATCCATCTGATAGGTACTTGACAAATCACCTTACAGCAGAATCTATGTATATTATACTAAAAGTAACTGGTTTTCTTAAGAACTTTTCTGTTGCGAATTTCATCTTGCAGTGTACCGAACGGTGATAAGCTCGACATCTTCGATTTCGGCGTGATACTACTCGAGGTTATCTCAGGCAGGCCCATCACATCCATCTACGAGGTGGAGATAATGAAAGAACAGGTGCAACACAAACTCCCTCCAAAGACTGAAACTGAACTGAATTTTTCATGAGACTTCAGATACTACCATCACACTGTCCACTTCTGAAAGTTCTGAAAAAGAAAAAAAGAAACTCACCTGTGTTCTTTCTGCAGCTGCAATCGGCGCTGACGGCGGAGGGGACGGCGAAGAGGAGGAGCTTTGTGGACCCGGCGGTGAGCAAGGGGTGCTCCGACGAGTCGGTGAAGACGGTGATGGAGATCTGCCTGAGGTGCCTGGCCAAGGAGGCGGTGCAGAGGCCGTCGGTGGAGGACGTGCTGTGGAACCTGCAGTTCGCCGCGCAGGTGCAGGATGACTGGAGAGGGGACTCCCGGAGCAGCGAGGAGTCGCCGCTGTCGCCGTCGCAGATCCCCAGAGACTTAGAAGACGACCAGTAGATCTGTAGATGATACTCCATCATAGCCTGCAGGTATCTATCACCAAACAAACCAAACCTTGCACTTTGAGCATCTGAACTATCATGCTCTGATCATCCATGGCTGATAGTTGAGGGAAATGTTATGCATTCAGCTATGATCTGAGATGATATTTTCTTGTGTTTTCTTGGATTTCTAGGTTGAGGCAAGAACAGCAACGGCAATTCAGCGGGAGACATTACATGAAGCAAACATTTTGCAGTGTGATCTTTCAAGAACCGAACATGAGAGAACAATTCAGATGGCAGCTGCAGCTGAAGCTAGACTGGAACTGGCATATGGTGTACTACTACCCTATAAGATAAGATGTGTATAGGGCCTTCTTGGTGTAGACCAGTAGAAGTCAGTGGGCTCTTTTACTTTCTTCACATTTTTTTTATCTTCTTTTTTTTTACCGCCTTTTCTATATGTTTCTTTTGAATATGTAAGAAGCTAAGCACAACTGTAATTTTGTAATTTTTCCCACTTTGAATCTAGGACTATAAATGTCTCACTACGAATCTAGGTCTAAATGTAATCATGGTTCAGTACCTCGTTTATGTCATGTCCTCTGTAGGGGCACTTCGGTTATCATTGTGTCAATGGTGTCAATACCATGTATCGCATTTGTTGTTTTAGACCTTTACATG
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| CDS seq | ATGGGAGGGAAGAATCTGGTGGTGTTGTTCTTGGTGTCGGTGGTGATGGCGATGGTGCCAGGGAGCACGCAGCTGCAGGCGTCGCAGACATGGTCGCTGCTCAAGATCCAGCAGATGCTCGGCTACCCGGCGGTGCTCGGCCACTGGCACAACTACACCGACTTCTGCTACGGCGGCGACTACAAGACCACGTCGGCGTTCGTCGAGTGCTACGGCGACAGCGTCACGCAGCTGCACATCATCGGCGGTGGCGGCGGCTCGCCGGCGCCGCCGCCGCTGCCCAAGACGTTCTCCATCGACTCCTTCTTCACCACGCTGTCGAGGCTCCCCGACCTCCGGGTGCTCACGCTCACCGGACTCGGACTCTGGGGCCCATTGCCCGGGAAGGTGTCGCGGCTCGCCGCGCTCGAGATCGTCAATGTCAGCGGCAACTACCTCTACGGCGAGCTCCCCCTCGCGCTGTCGCGGCTCGGCAACCTGCAGACGTTCATCGCCGACGACAACATGCTAAGCGGCGAGCTGCCGGCGTGGCTGGGGAGGCTGCCGGTGCTCGCCGTGCTGAGCCTGAGGAACAACTCGCTGGAGGGCACCTTGCCGGGGTCGGTGAGCGACATGGCGTCGCTGCGGTCGCTGTCGCTGGCGAGCAACAACCTGTCGGGCAACCTGCCGGACATGAGCGGCGCCAAGAACCTCCAGGTGATCGACCTCGCCAACAACTCGCTCGGGCCGGAGTTCCCGCGGCTCGGCCGGAAGGTGGCCAGCGTGGTGCTCGCCGGCAACAGGTTCAGCGACGGCCTCCCGCCGGAGCTCGCGTCGTTCTACCTCCTCGAGCGGCTCGACGTGTCCAGGAACAGGTTCGTCGGCCCGTTCATGCCGGCGCTGCTCTCTCTGCCGTCCATCGAGTACCTCAGCGTCGCCGGCAACCGCTTCACCGGCATGCTCTCCGGCAACATGTCGTGCGGCGACAACCTCAAATTCGTCGACGTCTCGTCCAACCTCCTCACGGGGAGCCTCCCGACCTGCCTCGCCGCCGGCGCCGTCGGCAAGGCGGCGGACTCCGACTCCGACTCCTCCAAGACGGTGCTCTTCTCGGCGAACTGCCTCGCCACCGGCGACGACACGCAGCACCCGTCCCCGTTCTGCAAGAACCAGGCCATCGCCGTCGGCATCGTGCCCGACCAGGCGCGGAGGAAGCCCAGCGGCGCCAGGTCCGGCCTCGTCGCCGGCGTCGTGGCGGCCGCCATTGCCGCCGCGGTGCTCGCCGGCGTGGCGGTCTTCCTCGCCGTGAGGAAGGCGAGCATGAGGAGGGCGCAGGCGAGGCCGCCACGGAGGCTCGTGGAGCACGCGTCGAGCGCCTATCCTTCCAAGCTCTTCGCCGATGCGCGTTACATATCTCAGACAGTGAAATTGGGAGCTCTGGGAATTCCAGCATACAGATCATTTTCTTTGGTCGAGCTCGAAGCGGCTACTAATGATTTCGAAGTATCAAATATGATGGGGCAAGATTCTCACGGACAGATGTACCGAGGAAGGCTAAGCAATGGAACTCCGGTGACAATCAGGTCTCTGAAGGTGAAGAGGAGCCAGACTTCCCAGAGCTTCAATCGCCACATTGAGATGATCTCCAAGCTCAGGCACAGGCACTTGGTCAGTGCACTTGGACACTGCTTCGAATACAATCTCGACGATTCCACCGTCACGCAATTGTATCTCGTCTTCGAATACGTTCAGAATGGCAACCTGAGAGGCAGAATTTCACAAGGAACAGAAGGGAGAAAGCTCACCTGGGTGCAGAGGATATCAACAGCCATTGGTGTTGCCAAAGGAATTCAATTCTTGCATGGAGGGATCATACCTGGCCTATTTGCGAATAATCTGAAGATCACCAACATTCTTCTAGACCAGAATCTTGTTGCCAAAATAGGCAGCTACAATATCCCCATCCTATCTGAAACCATGAAATCCGAGGGAGGATCTGGCAACAAGTATCCATCTGATAGTGTACCGAACGGTGATAAGCTCGACATCTTCGATTTCGGCGTGATACTACTCGAGGTTATCTCAGGCAGGCCCATCACATCCATCTACGAGGTGGAGATAATGAAAGAACAGCTGCAATCGGCGCTGACGGCGGAGGGGACGGCGAAGAGGAGGAGCTTTGTGGACCCGGCGGTGAGCAAGGGGTGCTCCGACGAGTCGGTGAAGACGGTGATGGAGATCTGCCTGAGGTGCCTGGCCAAGGAGGCGGTGCAGAGGCCGTCGGTGGAGGACGTGCTGTGGAACCTGCAGTTCGCCGCGCAGGTGCAGGATGACTGGAGAGGGGACTCCCGGAGCAGCGAGGAGTCGCCGCTGTCGCCGTCGCAGATCCCCAGAGACTTAGAAGACGACCAGTAG
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| Protein seq | MGGKNLVVLFLVSVVMAMVPGSTQLQASQTWSLLKIQQMLGYPAVLGHWHNYTDFCYGGDYKTTSAFVECYGDSVTQLHIIGGGGGSPAPPPLPKTFSIDSFFTTLSRLPDLRVLTLTGLGLWGPLPGKVSRLAALEIVNVSGNYLYGELPLALSRLGNLQTFIADDNMLSGELPAWLGRLPVLAVLSLRNNSLEGTLPGSVSDMASLRSLSLASNNLSGNLPDMSGAKNLQVIDLANNSLGPEFPRLGRKVASVVLAGNRFSDGLPPELASFYLLERLDVSRNRFVGPFMPALLSLPSIEYLSVAGNRFTGMLSGNMSCGDNLKFVDVSSNLLTGSLPTCLAAGAVGKAADSDSDSSKTVLFSANCLATGDDTQHPSPFCKNQAIAVGIVPDQARRKPSGARSGLVAGVVAAAIAAAVLAGVAVFLAVRKASMRRAQARPPRRLVEHASSAYPSKLFADARYISQTVKLGALGIPAYRSFSLVELEAATNDFEVSNMMGQDSHGQMYRGRLSNGTPVTIRSLKVKRSQTSQSFNRHIEMISKLRHRHLVSALGHCFEYNLDDSTVTQLYLVFEYVQNGNLRGRISQGTEGRKLTWVQRISTAIGVAKGIQFLHGGIIPGLFANNLKITNILLDQNLVAKIGSYNIPILSETMKSEGGSGNKYPSDSVPNGDKLDIFDFGVILLEVISGRPITSIYEVEIMKEQLQSALTAEGTAKRRSFVDPAVSKGCSDESVKTVMEICLRCLAKEAVQRPSVEDVLWNLQFAAQVQDDWRGDSRSSEESPLSPSQIPRDLEDDQ |
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| Function | Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [UniProtKB/Swiss-Prot:Q8LFN2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_07g0004620 | OsIR64_07g0004620.02 | Chr07 | 4004290 | 4009022 | + | NAM | ||
| CDS seq | ATGGGAGGGAAGAATCTGGTGGTGTTGTTCTTGGTGTCGGTGGTGATGGCGATGGTGCCAGGGAGCACGCAGCTGCAGGCGTCGCAGACATGGTCGCTGCTCAAGATCCAGCAGATGCTCGGCTACCCGGCGGTGCTCGGCCACTGGCACAACTACACCGACTTCTGCTACGGCGGCGACTACAAGACCACGTCGGCGTTCGTCGAGTGCTACGGCGACAGCGTCACGCAGCTGCACATCATCGGCGGTGGCGGCGGCTCGCCGGCGCCGCCGCCGCTGCCCAAGACGTTCTCCATCGACTCCTTCTTCACCACGCTGTCGAGGCTCCCCGACCTCCGGGTGCTCACGCTCACCGGACTCGGACTCTGGGGCCCATTGCCCGGGAAGGTGTCGCGGCTCGCCGCGCTCGAGATCGTCAATGTCAGCGGCAACTACCTCTACGGCGAGCTCCCCCTCGCGCTGTCGCGGCTCGGCAACCTGCAGACGTTCATCGCCGACGACAACATGCTAAGCGGCGAGCTGCCGGCGTGGCTGGGGAGGCTGCCGGTGCTCGCCGTGCTGAGCCTGAGGAACAACTCGCTGGAGGGCACCTTGCCGGGGTCGGTGAGCGACATGGCGTCGCTGCGGTCGCTGTCGCTGGCGAGCAACAACCTGTCGGGCAACCTGCCGGACATGAGCGGCGCCAAGAACCTCCAGGTGATCGACCTCGCCAACAACTCGCTCGGGCCGGAGTTCCCGCGGCTCGGCCGGAAGGTGGCCAGCGTGGTGCTCGCCGGCAACAGGTTCAGCGACGGCCTCCCGCCGGAGCTCGCGTCGTTCTACCTCCTCGAGCGGCTCGACGTGTCCAGGAACAGGTTCGTCGGCCCGTTCATGCCGGCGCTGCTCTCTCTGCCGTCCATCGAGTACCTCAGCGTCGCCGGCAACCGCTTCACCGGCATGCTCTCCGGCAACATGTCGTGCGGCGACAACCTCAAATTCGTCGACGTCTCGTCCAACCTCCTCACGGGGAGCCTCCCGACCTGCCTCGCCGCCGGCGCCGTCGGCAAGGCGGCGGACTCCGACTCCGACTCCTCCAAGACGGTGCTCTTCTCGGCGAACTGCCTCGCCACCGGCGACGACACGCAGCACCCGTCCCCGTTCTGCAAGAACCAGGCCATCGCCGTCGGCATCGTGCCCGACCAGGCGCGGAGGAAGCCCAGCGGCGCCAGGTCCGGCCTCGTCGCCGGCGTCGTGGCGGCCGCCATTGCCGCCGCGGTGCTCGCCGGCGTGGCGGTCTTCCTCGCCGTGAGGAAGGCGAGCATGAGGAGGGCGCAGGCGAGGCCGCCACGGAGGCTCGTGGAGCACGCGTCGAGCGCCTATCCTTCCAAGCTCTTCGCCGATGCGCGTTACATATCTCAGACAGTGAAATTGGGAGCTCTGGGAATTCCAGCATACAGATCATTTTCTTTGGTCGAGCTCGAAGCGGCTACTAATGATTTCGAAGTATCAAATATGATGGGGCAAGATTCTCACGGACAGATGTACCGAGGAAGGCTAAGCAATGGAACTCCGGTGACAATCAGGTCTCTGAAGGTGAAGAGGAGCCAGACTTCCCAGAGCTTCAATCGCCACATTGAGATGATCTCCAAGCTCAGGCACAGGCACTTGGTCAGTGCACTTGGACACTGCTTCGAATACAATCTCGACGATTCCACCGTCACGCAATTGTATCTCGTCTTCGAATACGTTCAGAATGGCAACCTGAGAGGCAGAATTTCACAAGGAACAGAAGGGAGAAAGCTCACCTGGGTGCAGAGGATATCAACAGCCATTGGTGTTGCCAAAGGAATTCAATTCTTGCATGGAGGGATCATACCTGGCCTATTTGCGAATAATCTGAAGATCACCAACATTCTTCTAGACCAGAATCTTGTTGCCAAAATAGGCAGCTACAATATCCCCATCCTATCTGAAACCATGAAATCCGAGGGAGGATCTGGCAACAAGTATCCATCTGATAGTGTACCGAACGGTGATAAGCTCGACATCTTCGATTTCGGCGTGATACTACTCGAGGTTATCTCAGGCAGGCCCATCACATCCATCTACGAGGTGGAGATAATGAAAGAACAGCTGCAATCGGCGCTGACGGCGGAGGGGACGGCGAAGAGGAGGAGCTTTGTGGACCCGGCGGTGAGCAAGGGGTGCTCCGACGAGTCGGTGAAGACGGTGATGGAGATCTGCCTGAGGTGCCTGGCCAAGGAGGCGGTGCAGAGGCCGTCGGTGGAGGACGTGCTGTGGAACCTGCAGTTCGCCGCGCAGGTGCAGGATGACTGGAGAGGGGACTCCCGGAGCAGCGAGGAGTCGCCGCTGTCGCCGTCGCAGATCCCCAGAGACTTAGAAGACGACCAGTAG
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| Protein seq | MGGKNLVVLFLVSVVMAMVPGSTQLQASQTWSLLKIQQMLGYPAVLGHWHNYTDFCYGGDYKTTSAFVECYGDSVTQLHIIGGGGGSPAPPPLPKTFSIDSFFTTLSRLPDLRVLTLTGLGLWGPLPGKVSRLAALEIVNVSGNYLYGELPLALSRLGNLQTFIADDNMLSGELPAWLGRLPVLAVLSLRNNSLEGTLPGSVSDMASLRSLSLASNNLSGNLPDMSGAKNLQVIDLANNSLGPEFPRLGRKVASVVLAGNRFSDGLPPELASFYLLERLDVSRNRFVGPFMPALLSLPSIEYLSVAGNRFTGMLSGNMSCGDNLKFVDVSSNLLTGSLPTCLAAGAVGKAADSDSDSSKTVLFSANCLATGDDTQHPSPFCKNQAIAVGIVPDQARRKPSGARSGLVAGVVAAAIAAAVLAGVAVFLAVRKASMRRAQARPPRRLVEHASSAYPSKLFADARYISQTVKLGALGIPAYRSFSLVELEAATNDFEVSNMMGQDSHGQMYRGRLSNGTPVTIRSLKVKRSQTSQSFNRHIEMISKLRHRHLVSALGHCFEYNLDDSTVTQLYLVFEYVQNGNLRGRISQGTEGRKLTWVQRISTAIGVAKGIQFLHGGIIPGLFANNLKITNILLDQNLVAKIGSYNIPILSETMKSEGGSGNKYPSDSVPNGDKLDIFDFGVILLEVISGRPITSIYEVEIMKEQLQSALTAEGTAKRRSFVDPAVSKGCSDESVKTVMEICLRCLAKEAVQRPSVEDVLWNLQFAAQVQDDWRGDSRSSEESPLSPSQIPRDLEDDQ
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_07g0004620 | OsIR64_07g0004620.01 | Chr07 | 4004290 | 4009525 | + | NAM | ||
| CDS seq | ATGGGAGGGAAGAATCTGGTGGTGTTGTTCTTGGTGTCGGTGGTGATGGCGATGGTGCCAGGGAGCACGCAGCTGCAGGCGTCGCAGACATGGTCGCTGCTCAAGATCCAGCAGATGCTCGGCTACCCGGCGGTGCTCGGCCACTGGCACAACTACACCGACTTCTGCTACGGCGGCGACTACAAGACCACGTCGGCGTTCGTCGAGTGCTACGGCGACAGCGTCACGCAGCTGCACATCATCGGCGGTGGCGGCGGCTCGCCGGCGCCGCCGCCGCTGCCCAAGACGTTCTCCATCGACTCCTTCTTCACCACGCTGTCGAGGCTCCCCGACCTCCGGGTGCTCACGCTCACCGGACTCGGACTCTGGGGCCCATTGCCCGGGAAGGTGTCGCGGCTCGCCGCGCTCGAGATCGTCAATGTCAGCGGCAACTACCTCTACGGCGAGCTCCCCCTCGCGCTGTCGCGGCTCGGCAACCTGCAGACGTTCATCGCCGACGACAACATGCTAAGCGGCGAGCTGCCGGCGTGGCTGGGGAGGCTGCCGGTGCTCGCCGTGCTGAGCCTGAGGAACAACTCGCTGGAGGGCACCTTGCCGGGGTCGGTGAGCGACATGGCGTCGCTGCGGTCGCTGTCGCTGGCGAGCAACAACCTGTCGGGCAACCTGCCGGACATGAGCGGCGCCAAGAACCTCCAGGTGATCGACCTCGCCAACAACTCGCTCGGGCCGGAGTTCCCGCGGCTCGGCCGGAAGGTGGCCAGCGTGGTGCTCGCCGGCAACAGGTTCAGCGACGGCCTCCCGCCGGAGCTCGCGTCGTTCTACCTCCTCGAGCGGCTCGACGTGTCCAGGAACAGGTTCGTCGGCCCGTTCATGCCGGCGCTGCTCTCTCTGCCGTCCATCGAGTACCTCAGCGTCGCCGGCAACCGCTTCACCGGCATGCTCTCCGGCAACATGTCGTGCGGCGACAACCTCAAATTCGTCGACGTCTCGTCCAACCTCCTCACGGGGAGCCTCCCGACCTGCCTCGCCGCCGGCGCCGTCGGCAAGGCGGCGGACTCCGACTCCGACTCCTCCAAGACGGTGCTCTTCTCGGCGAACTGCCTCGCCACCGGCGACGACACGCAGCACCCGTCCCCGTTCTGCAAGAACCAGGCCATCGCCGTCGGCATCGTGCCCGACCAGGCGCGGAGGAAGCCCAGCGGCGCCAGGTCCGGCCTCGTCGCCGGCGTCGTGGCGGCCGCCATTGCCGCCGCGGTGCTCGCCGGCGTGGCGGTCTTCCTCGCCGTGAGGAAGGCGAGCATGAGGAGGGCGCAGGCGAGGCCGCCACGGAGGCTCGTGGAGCACGCGTCGAGCGCCTATCCTTCCAAGCTCTTCGCCGATGCGCGTTACATATCTCAGACAGTGAAATTGGGAGCTCTGGGAATTCCAGCATACAGATCATTTTCTTTGGTCGAGCTCGAAGCGGCTACTAATGATTTCGAAGTATCAAATATGATGGGGCAAGATTCTCACGGACAGATGTACCGAGGAAGGCTAAGCAATGGAACTCCGGTGACAATCAGGTCTCTGAAGGTGAAGAGGAGCCAGACTTCCCAGAGCTTCAATCGCCACATTGAGATGATCTCCAAGCTCAGGCACAGGCACTTGGTCAGTGCACTTGGACACTGCTTCGAATACAATCTCGACGATTCCACCGTCACGCAATTGTATCTCGTCTTCGAATACGTTCAGAATGGCAACCTGAGAGGCAGAATTTCACAAGGAACAGAAGGGAGAAAGCTCACCTGGGTGCAGAGGATATCAACAGCCATTGGTGTTGCCAAAGGAATTCAATTCTTGCATGGAGGGATCATACCTGGCCTATTTGCGAATAATCTGAAGATCACCAACATTCTTCTAGACCAGAATCTTGTTGCCAAAATAGGCAGCTACAATATCCCCATCCTATCTGAAACCATGAAATCCGAGGGAGGATCTGGCAACAAGTATCCATCTGATAGTGTACCGAACGGTGATAAGCTCGACATCTTCGATTTCGGCGTGATACTACTCGAGGTTATCTCAGGCAGGCCCATCACATCCATCTACGAGGTGGAGATAATGAAAGAACAGCTGCAATCGGCGCTGACGGCGGAGGGGACGGCGAAGAGGAGGAGCTTTGTGGACCCGGCGGTGAGCAAGGGGTGCTCCGACGAGTCGGTGAAGACGGTGATGGAGATCTGCCTGAGGTGCCTGGCCAAGGAGGCGGTGCAGAGGCCGTCGGTGGAGGACGTGCTGTGGAACCTGCAGTTCGCCGCGCAGGTGCAGGATGACTGGAGAGGGGACTCCCGGAGCAGCGAGGAGTCGCCGCTGTCGCCGTCGCAGATCCCCAGAGACTTAGAAGACGACCAGTAG
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| Protein seq | MGGKNLVVLFLVSVVMAMVPGSTQLQASQTWSLLKIQQMLGYPAVLGHWHNYTDFCYGGDYKTTSAFVECYGDSVTQLHIIGGGGGSPAPPPLPKTFSIDSFFTTLSRLPDLRVLTLTGLGLWGPLPGKVSRLAALEIVNVSGNYLYGELPLALSRLGNLQTFIADDNMLSGELPAWLGRLPVLAVLSLRNNSLEGTLPGSVSDMASLRSLSLASNNLSGNLPDMSGAKNLQVIDLANNSLGPEFPRLGRKVASVVLAGNRFSDGLPPELASFYLLERLDVSRNRFVGPFMPALLSLPSIEYLSVAGNRFTGMLSGNMSCGDNLKFVDVSSNLLTGSLPTCLAAGAVGKAADSDSDSSKTVLFSANCLATGDDTQHPSPFCKNQAIAVGIVPDQARRKPSGARSGLVAGVVAAAIAAAVLAGVAVFLAVRKASMRRAQARPPRRLVEHASSAYPSKLFADARYISQTVKLGALGIPAYRSFSLVELEAATNDFEVSNMMGQDSHGQMYRGRLSNGTPVTIRSLKVKRSQTSQSFNRHIEMISKLRHRHLVSALGHCFEYNLDDSTVTQLYLVFEYVQNGNLRGRISQGTEGRKLTWVQRISTAIGVAKGIQFLHGGIIPGLFANNLKITNILLDQNLVAKIGSYNIPILSETMKSEGGSGNKYPSDSVPNGDKLDIFDFGVILLEVISGRPITSIYEVEIMKEQLQSALTAEGTAKRRSFVDPAVSKGCSDESVKTVMEICLRCLAKEAVQRPSVEDVLWNLQFAAQVQDDWRGDSRSSEESPLSPSQIPRDLEDDQ
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_07g0004620 | OsIR64_07g0004620.03 | Chr07 | 4004388 | 4009511 | + | NAM | ||
| CDS seq | ATGGGAGGGAAGAATCTGGTGGTGTTGTTCTTGGTGTCGGTGGTGATGGCGATGGTGCCAGGGAGCACGCAGCTGCAGGCGTCGCAGACATGGTCGCTGCTCAAGATCCAGCAGATGCTCGGCTACCCGGCGGTGCTCGGCCACTGGCACAACTACACCGACTTCTGCTACGGCGGCGACTACAAGACCACGTCGGCGTTCGTCGAGTGCTACGGCGACAGCGTCACGCAGCTGCACATCATCGGCGGTGGCGGCGGCTCGCCGGCGCCGCCGCCGCTGCCCAAGACGTTCTCCATCGACTCCTTCTTCACCACGCTGTCGAGGCTCCCCGACCTCCGGGTGCTCACGCTCACCGGACTCGGACTCTGGGGCCCATTGCCCGGGAAGGTGTCGCGGCTCGCCGCGCTCGAGATCGTCAATGTCAGCGGCAACTACCTCTACGGCGAGCTCCCCCTCGCGCTGTCGCGGCTCGGCAACCTGCAGACGTTCATCGCCGACGACAACATGCTAAGCGGCGAGCTGCCGGCGTGGCTGGGGAGGCTGCCGGTGCTCGCCGTGCTGAGCCTGAGGAACAACTCGCTGGAGGGCACCTTGCCGGGGTCGGTGAGCGACATGGCGTCGCTGCGGTCGCTGTCGCTGGCGAGCAACAACCTGTCGGGCAACCTGCCGGACATGAGCGGCGCCAAGAACCTCCAGGTGATCGACCTCGCCAACAACTCGCTCGGGCCGGAGTTCCCGCGGCTCGGCCGGAAGGTGGCCAGCGTGGTGCTCGCCGGCAACAGGTTCAGCGACGGCCTCCCGCCGGAGCTCGCGTCGTTCTACCTCCTCGAGCGGCTCGACGTGTCCAGGAACAGGTTCGTCGGCCCGTTCATGCCGGCGCTGCTCTCTCTGCCGTCCATCGAGTACCTCAGCGTCGCCGGCAACCGCTTCACCGGCATGCTCTCCGGCAACATGTCGTGCGGCGACAACCTCAAATTCGTCGACGTCTCGTCCAACCTCCTCACGGGGAGCCTCCCGACCTGCCTCGCCGCCGGCGCCGTCGGCAAGGCGGCGGACTCCGACTCCGACTCCTCCAAGACGGTGCTCTTCTCGGCGAACTGCCTCGCCACCGGCGACGACACGCAGCACCCGTCCCCGTTCTGCAAGAACCAGGCCATCGCCGTCGGCATCGTGCCCGACCAGGCGCGGAGGAAGCCCAGCGGCGCCAGGTCCGGCCTCGTCGCCGGCGTCGTGGCGGCCGCCATTGCCGCCGCGGTGCTCGCCGGCGTGGCGGTCTTCCTCGCCGTGAGGAAGGCGAGCATGAGGAGGGCGCAGGCGAGGCCGCCACGGAGGCTCGTGGAGCACGCGTCGAGCGCCTATCCTTCCAAGCTCTTCGCCGATGCGCGTTACATATCTCAGACAGTGAAATTGGGAGCTCTGGGAATTCCAGCATACAGATCATTTTCTTTGGTCGAGCTCGAAGCGGCTACTAATGATTTCGAAGTATCAAATATGATGGGGCAAGATTCTCACGGACAGATGTACCGAGGAAGGCTAAGCAATGGAACTCCGGTGACAATCAGGTCTCTGAAGGTGAAGAGGAGCCAGACTTCCCAGAGCTTCAATCGCCACATTGAGATGATCTCCAAGCTCAGGCACAGGCACTTGGTCAGTGCACTTGGACACTGCTTCGAATACAATCTCGACGATTCCACCGTCACGCAATTGTATCTCGTCTTCGAATACGTTCAGAATGGCAACCTGAGAGGCAGAATTTCACAAGGAACAGAAGGGAGAAAGCTCACCTGGGTGCAGAGGATATCAACAGCCATTGGTGTTGCCAAAGGAATTCAATTCTTGCATGGAGGGATCATACCTGGCCTATTTGCGAATAATCTGAAGATCACCAACATTCTTCTAGACCAGAATCTTGTTGCCAAAATAGGCAGCTACAATATCCCCATCCTATCTGAAACCATGAAATCCGAGGGAGGATCTGGCAACAAGTATCCATCTGATAGTGTACCGAACGGTGATAAGCTCGACATCTTCGATTTCGGCGTGATACTACTCGAGGTTATCTCAGGCAGGCCCATCACATCCATCTACGAGGTGGAGATAATGAAAGAACAGCTGCAATCGGCGCTGACGGCGGAGGGGACGGCGAAGAGGAGGAGCTTTGTGGACCCGGCGGTGAGCAAGGGGTGCTCCGACGAGTCGGTGAAGACGGTGATGGAGATCTGCCTGAGGTGCCTGGCCAAGGAGGCGGTGCAGAGGCCGTCGGTGGAGGACGTGCTGTGGAACCTGCAGTTCGCCGCGCAGGTGCAGGATGACTGGAGAGGGGACTCCCGGAGCAGCGAGGAGTCGCCGCTGTCGCCGTCGCAGATCCCCAGAGACTTAGAAGACGACCAGTAG
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| Protein seq | MGGKNLVVLFLVSVVMAMVPGSTQLQASQTWSLLKIQQMLGYPAVLGHWHNYTDFCYGGDYKTTSAFVECYGDSVTQLHIIGGGGGSPAPPPLPKTFSIDSFFTTLSRLPDLRVLTLTGLGLWGPLPGKVSRLAALEIVNVSGNYLYGELPLALSRLGNLQTFIADDNMLSGELPAWLGRLPVLAVLSLRNNSLEGTLPGSVSDMASLRSLSLASNNLSGNLPDMSGAKNLQVIDLANNSLGPEFPRLGRKVASVVLAGNRFSDGLPPELASFYLLERLDVSRNRFVGPFMPALLSLPSIEYLSVAGNRFTGMLSGNMSCGDNLKFVDVSSNLLTGSLPTCLAAGAVGKAADSDSDSSKTVLFSANCLATGDDTQHPSPFCKNQAIAVGIVPDQARRKPSGARSGLVAGVVAAAIAAAVLAGVAVFLAVRKASMRRAQARPPRRLVEHASSAYPSKLFADARYISQTVKLGALGIPAYRSFSLVELEAATNDFEVSNMMGQDSHGQMYRGRLSNGTPVTIRSLKVKRSQTSQSFNRHIEMISKLRHRHLVSALGHCFEYNLDDSTVTQLYLVFEYVQNGNLRGRISQGTEGRKLTWVQRISTAIGVAKGIQFLHGGIIPGLFANNLKITNILLDQNLVAKIGSYNIPILSETMKSEGGSGNKYPSDSVPNGDKLDIFDFGVILLEVISGRPITSIYEVEIMKEQLQSALTAEGTAKRRSFVDPAVSKGCSDESVKTVMEICLRCLAKEAVQRPSVEDVLWNLQFAAQVQDDWRGDSRSSEESPLSPSQIPRDLEDDQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 2.008606 | 1.272673 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0166700 | RBH | 0.410735 | 0.389662 | 6.694536 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g07230 | RBH | 0.352338 | 0.256919 | 1.868119 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0166700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0004220 | RBH | 0.053006 | 17.540806 | 16.023750 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0004180 | RBH | 0.201770 | 9.195406 | 2.298457 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0004070 | RBH | 0.116888 | 14.418299 | 14.145942 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0004020 | RBH | 0.011447 | 1.048318 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0004110 | RBH | 4.077199 | 47.433727 | 22.926517 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0059800 | RBH | 18.776539 | 5.207421 | 10.3246805 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0037100 | RBH | 0.000000 | 0.047371 | 0.341658 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0063000 | RBH | 14.8575205 | 0.4997605 | 19.80528 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0004100 | RBH | 0.024838 | 0.307047 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0004100 | RBH | 0.100411 | 15.655620 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0004130 | RBH | 0.0 | 26.856102 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0038860 | RBH | 0.169215 | 0.0 | 0.550190 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0004090 | RBH | 0.049360 | 16.717075 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G004260 | RBH | 0.078954 | 8.959815 | 9.200301 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0004050 | RBH | 0.251942 | 5.493406 | 7.933642 |
