Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_06g0020380 | OGI:01011440 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr06:24212445-24220052 | ||||||||
| Gene Symbol | DLN238, OsDLN238 | ||||||||||
| DNA seq | ATCCAAAACAGATCCAAAGTCAGATCGAAGAAGATAGACATGGAGAGCGAAAAGAAAAAGGCGAAGAAGAAAAGAGAAGAAGAAGAACCAAAATCCAAGATCAAATCTGAAGAAAAAATCAAAACATCAAGATCCAAACAAGGTCAGATGAATCCTTGCCTCTTTTGCTTCTTGAATCACCAAGCAATTTACTCCATCTCTGGTTGAAACTTGATAGGAAGTAAGTCAAACCCTGATAAACCAAAATATGAATCTAGATCAGTTTTAATAATAACCCCAATATTTAAAAACTTACAATACAACAAGAGTTTTTAGGAATTATTTGATTTAGTTCAAAAACTGACAATTACATTCATCAGACCTCTCCAAAATCCAAGTTCTGTTAATTAACAAGAAACAATCATATAGTAAATACAGAAAATTACACTGTACATACACATGTTGAACTGAAAAATTTGCACCATACAAGCACACAGCAATATATTTACACATTTCTAGTACAGTTCATAGCTAGTGCACACATGCAACACTAAGAAGCAGAACTTTGCAAATTTTTGCAAGAAAAACAACAGTATAAAAAGAATTATAAAAAGTTACATTATGAAATATGTAAAGTTACAGATGTAACTTCAGTTATACTGACATGTAACTGCAGTGTAAAAACAGTCAAATCATAATGTAACTAACTTGACTTCAGTTATACTTGACTTGAAGAACAATTGGAACAATATCAAAACTTACATCACCACAGACCTAAAATTATATTTGTAATTCATATATATTTCCAATGTAACTACAACTGTAATTTCCATTGTTTTATCCTGCAACTTCATACAAATCTATTGCCATACAAAATGCACATGCCATATATAAAAAAAACACACTAAGTTATCACATATTCCTACAATAAGCATTCTCTCCAAATCCAATTTCTGTTAAGTAGCAAGAATCATTCATGAAATTACTACAAAAAGGTCCACCATAAAGGCACACAGCAAATATATTTGCCCATTTCTAGTACAGTTCATAGCTAGTGCACACATGCAACACTAAGAAGCAGAACTTTGGAAATTTTTGCAAGAAAAACAATAGTATAAAAAGAACTATAGAAAGTTACATTATGAAATATGTGAAGTTACAATTGTAACTTCAGTTATACTGACATGTAACTGCAGTGTAAAAACAGTCAAATCATATTGTAACTAACTTGACTTTAATTATACTTGACTTGAAGAACAACTTACATCACCACAGACCTAAAATTACATTTGTAATTCATATATATTTCCAATGTAACTACAACTGTAATTTCCATTATTTTATCCTGTAACTTCATACAAATCTATTTGTAGCGCCATACAAATGAAATGAAAGCTAACACTAATTTTTCAGAGGACAAAAACATCAATTTGGTAAAAAAAAACCAACATTCAAAAACTTCATATACAATAATGTTTAGAAACTGACATATCATCTGAAGATATAAATCTGATCAGATCATGAACTCCATTAGATAATATCATTTCATTAACCACTGACTATACAACAAACCACATTAAAACAAGTTGGACAAACTTCTTTAAACAAAAATACTTGATCACTAAAAATGTACATTTCAATTTAATATGCACATGGGATCAGTTGGACAAATATGAGGGATTGACATGCTAGTCCAACTGGAGTATTGCAATAGAACAAGACAGTCACAATCAGCAAATGTGCACGTAGAATAATCAGCAGTGCAAATTAACCACTTTTGAAAACATATGTAACAAATGCCAAATCAGAAGTCCAAAATAAAAAACCAATTTTGTAATAAAGCTACAAGCAATGAGTTAATCAGTCAAGTGGAATTTGTGCAGCAATTAAAGGTCAAAGTTAGCTGTCAATGAGTTAATAAAGCTACATGCAATGAGTTAATCACTCAATGGCTCTAGGATATCATTCCAAACAAGCAGCAACTTCACTGGAAGGAACAGGGAGAAACAATAAAATAGTAAACAGGACATGGCAAGCACACTGCCAATCCGCAAAAAGTCAGAAAATTCAGAGAAAAAATATGACATGAAATAAATCTGATAATATAAAGTTACAGTCCTTGCCATCAGATAAATATGAAAAATATCTCTAATTAACAAATAAATATGCAATCAGATATAAAATAAACACCTACATTAAGCATTCTCTCCAAATCCAATTTCTGTTAAGTAGCAAGAATCATTCATGAAATTAATACAAAATGTCCACCATAAAGGCACACAGCAAATATATTTGTCCATTTCTAGTATAGTTCATAGGTATTACACACATCCAACACTAACAAGCAAAACTTTGGCAAATTTTGCAAGAAAAACAGCAGTATAAAAAGAACTATAGAAAGTTACATTATGAAATATGTGAAGTTACAGTTGTAACTTTAGTTATACTGACATGTAACTGCAGTGTAAAAACAGTCAAATCATATTGTAATTAACTTGATTTCAGTTATACTTGACTATATAACTATATCGAAACCCAATAAAGTTTCAGATTTACATCACTTCATATATTTGATAAATTACATTAGTAATTAGATAAATTAACATTTATAAAAACAATTTGTCTTGCATATAAGTTCATTTTAATTTTGCTGCATATGCTTTGAAAATAAATATCTACTACTTAGCATTCTTGTAAGATGGTTTCAGCAGTCAAATATACTAATTTATTCTATGAATTTTGTAGGAATGAAATTTACCGAACCAGTTCGCATTGGACCCCTGGAGAAAAAAGGTAAAAAAAAAAGTAGACTATTCGAGACCAAGATGCAAATTAGCAAAAAAAATATATAAATATGCATGATCTTATATAATTTTTAATACTCATAAAACATGGAAAATTTGTGTCATTCAAATTAAATTTCATCTATATTTACATGTACAAATAACTAAAGTTACACATGTAAGTACAGTTGATTTGCAATATAATTAGAGTATAACTTCATATATTCTAGGATTCTTTCATTTAACTGTTTGATTTTCTTTTGTGCAGAATTGAACTCAATTTCAGAACATAAACAGAAAGTTAGCTTCGAGACACAGGGAAATAAACAAAACCATATGAAACAAAATGCAGGTATGAGATATAAGCATAAAGCAGAAAATAGACTTAACAAGCATTAAGCAAGCATCAAAATAATTAAAACACCAGGATTTGTACAGTGAATCAGAAGCAAAAATTACATATATACATACATTTAATTTGTTATGTAACTTAGTATTATTCTTAGATGATCTGTATAAACATGAATTATTATGGTATCACTATTTTGTGTTATATTTTGCAGGAATAAGGATAATGCCATATGCTGAACCAAATGAGAATAGCAAGAGTATAACCCAAGGAAGCAAAGAGGGTAACAACAAAACAATACAGTCAGGTTAGTAAACATACAAATCCACTGTGCTAGATCATAAAAATCTGACATGCCAATACTTGTACAAAAAAGAAAAGAAACATATCAAACTTACCAATAAAATTGACACTTCTTGCAGGTACAAATATTCATCAACTACAAGATGGAGAAAGAAGTTTAAAAGAATCAGAGAGAAACAAAATAGATACAAAGCATACTGAAGAAACAAGTTCTAGTATCACACAAATTACAGGTCAGAAAAAAATGATACTCTTTAACCATATGTAATTTACACCAAATGAATTCAATTTGAAAATTCAACTAGCTGATCCATCATGCTTTTCAATTCACAGGAATCGGCACAACCCAATCGCCACAAAGCCTAGCATTACTACATGATGAGTTAACCATGCTTAAGTCACATACTACACTGGTAATTTGAATAAACAAGTAACATAGAAAAATGCATGTCACAACACTTTATTTGATACTAACAAATTGAAATGCAGGTAGCACAGTTGTCGTACACAAGTCTAATGCACCAAGTAATAAATAGTCCAAGGATTAACATAGAACCAAATATGGTAAGGATATAGATTCGTAATATTAATATTATTGTACAACAGCATATGCTTCACTAACAAAATATAAAAATGATGCAGGGAGGAAGAGGACTAGAAAGTTTCACAAGTATGCTTCAAACACCATCAGCATATAATGTAAGTTTATTTTAAACTTAATTTATATACACAGCTACTAATCGATTTTGCAGAAATACTCTTGTTAATTGTATGTAATATTTTTTAAAATTTCCACACTGCAGAATTCAATGATACTAACTACGAGCAGAGTTTGTGAACAAGACATGCTGCTGGAAGACAGAAACAATGACCTATTAATCCCAAGCAAACATTACAGTTACCAAGAATTTGATGAAATCTACAACAGTGCAAGGATCACACCAGAGGTAAAAATTGCAATTACAAAAATAAATTATAATCATTTTTAAATTTGTATGAGTAGTATGCTAACATTTCATCAAAATATACAGATTCCAGTTGACAAAACTATGGAGGAATTGTACAAATTACAAAACACACATTTGAAATCACAGGTACTTTCATTAATTAATAAATTAATCATGTTAAAATTATATAGGCTACATATCAAAAATTTATTGTAAGAGATATCTGCAGGGAATTCCTACAAGCTGGGCCACTCAGAACAGAGATCAAGAGGACTTTGAAAGTGATCAGGTTTGTAAAAAATAAACATATAGATCACTAAGAAGATTCCAAAGTTATTTCTGTTTTCTTTAACTAGAACTGTAAATTAGCTTTGCAAAAAAATTTGATTTACTACTATTAATCCTTGTTTTCAGCCATACAATGAAAACTTTCATGAGCAAGATATTGAAGAGCAACAAAAAAGACCTGAAGCAACAGAAATTTCAGGGATACAACAGCAGCAAACAGAGGCTGAAATGAATGATAATTTAAATTTAGCTACTAACAACGGGGAGGAATTAAGTGAGGAAGACATTGACAATTTCTTACAAAATGAAGAGGAGAGCAGTTTACCAATAGATGATAAACACATACCTAAGCTAGGAATGAAGTTCAAATCACATACAGAAGTTAGAGGCTTCTTCAACTTCTATGCATACCTAGCCGGTTTTTCTGTTGTGATTGCGCACCACTACAAGACAACAAGCAAGAAAAGACAAGGTGAAATTACAAAGTACACATACAAATGCAACTTGCAAGGCAAAAATGAACCAGCAAACAAGAAGAAGAGAAATGAACAAGTTACTGAACAGCAGAGGGAAACAGTAGTCCTAGTCAAAACAAATTGCAAATGTACAATGGTAGCAAAAGAAGTTGGACAGTTTTGGCAAATATCAAGGCTTGATCTGAATCATAACCATGCACTTTGCCCAAGAAGAGAAGCTAAATTTCTGAGGTCTCATAAGGATATGACAGAGGAAGAAAAGAGACTAATAAGGACACTAAAAGAGTGCAACATACCAACTAGGAGCATGATTGTGATATTATCATTTCTCCGAGGTGGCTTGGCAGCACTACCCTACACCAAGAAGAATGTAAGTAATGTTGGGACAGCAATAAATTCAGAGACAAGAAACAATGACATGAAGCAAGTGTTGAATTATCTCAAGAAAAAGGAACAAGATGACCCTGGAATGTACTACAAATTCAAGCTAGATGAAGAAAACAAGGTGACAAGCATGTTTTGGACTGATGGTAGATCGACTCAGCTATATGAGGAATATGGTGACTGTATCAGTTTTGACACAACGTATAGAACAAACAGATACAATATGCCATTTGCACCGTTTGTTGGTGTTACAGGACATGGGTCAACTTGCTTGTTTGGTTGTGCATTTTTAGGAGATGAAACGGCAGAGACATTCAAGTGGGTTTTTGAAACATTTATAACAGCAATGGGAGGGAAACATCCCAAGACTATAATTACAGATCAAGATAATGCCATGAGATCAGCAATTGCACAGGTTTTTCAAAACACAAAGCACAGAAACTGTCTATTTCACATCAAGAAAAATTGCAGAGAAAAGACAGGAAGCATGTTCTCTGCAAAAGCAAATAGAAACCTGTATGAGGACTATGATGACATACTAAACAATTGCCTAACAGAAGAAGAATTTGAAGTGCTTTGGCCTCAGATGATTGAAAAGTTTAGTTTGCAAAATATAAAATACTTGCAGCTAATGTGGAAGAATAGAGCTCAGTTTGTGCCTGTCTACTTCAAATATGATTTCTGCCCTTTTATACAAAGCACAGCGCTGAGTGAGGGAACAAATAGCAGATTCAAAAGAGGAGTTGGACCACAACACAGTGTGATGAGTTTTATGAAGGAATATGAGAACATAAATGATACTATCTTTGATACTGAGTACAGCAAAGATTTCCAATCAAGGACAAAAATGCCAAAAACACTATGGTTCAACTATCTCATTGAAGAGCAGGCATCGGAACTATATAATCTAGACATATTCAGAAAATTCCAAAATGAATTAAAGGATACTTTAAGGTTGCAAGTATCTGTGATACAACAGGGCAAAGTGTATGAAGTGTTTGTGTCACCTAATAGCATCCAGCAAGAATATAGACAAAGGAAACATATAGTGATCATTGACTTACCAAATGAAAACTTCGGTTGCATTTGTGGGAAGTTCTCTAAGGATGGAATGCTATGTTCACATATCCTGAAAGTGATGTTGGAACTCAATGTGAGAAAAATTCCAGAAAAATACATTATTGATAGATGGAGAAAAAAAGAAAAGAAGGAGAAAGTGAAAGGCAGCATACATACAGATGCAACAGACAACTCTGTTCTGATGTTTAATGTTCTATCAAGGAAAGGTGCTGACATAGCATCAAAAGCATCAAAAAGAAAAAGAACATATCAGTTCATGATGGAGGAACTTGAGAAATTAGAAATGAATGTGCAATTGATGATTGAACAGGAGGCCGAAACACACCTGTCACAAGATGAAAGCAACACAGTACAAAATGATACTGTGCAGCAAGCAGAAGAAGAGATAATAGAAGAAGTGGAAATAGAAGACCCAGATTTGGCCAATACTAAAGGAAGAAAACCAAAAAGATATAGAAGAATAGTAGAGAAGATGATAGAAACTTCAAAAAGGAAAAGTAAAGATGAGCAACACACAACAGAAACAAGTAAGTGTAGCAAGATCAAGAATCCACATATAACTATAAATTGTAGAAATAACAAGTTTTTTTTTGCAGGAACAAGTGAGATAACCAATACAGGGAACAAGCAAGAAGAGATGAAAACATCAAAAACTACAAAAAGAAGTAATAAACAAATCAATTATAATACATATACAAAAATGAAACTATATATAATGAAAACCTAATGCATACTTCTTTTTTGCAGGAAAGAAAAACAATACTCAAGAGGAAACTCCTAAAGAGAAGTTGCATGCAAAGACAAGCTGACCAAAGACATTGGAAATGAAAGGACAAATTGAAGACCATCAGTAATGGAAGAAAAAAAAAAGAGATCTTTCTTCTATGTAATAGCATTCAGACTGTAAACACTACAAATGTTGCATAATTGTTTTTCTCATACTACATTACAAGTATGTAATATACTGCCAGAGTGCTACATTATATGTATCTAATGTACTGCCAGTAGAACAAATATCC
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| CDS seq | ATGGAGAGCGAAAAGAAAAAGGCGAAGAAGAAAAGAGAAGAAGAAGAACCAAAATCCAAGATCAAATCTGAAGAAAAAATCAAAACATCAAGATCCAAACAAGAATTGAACTCAATTTCAGAACATAAACAGAAAGTTAGCTTCGAGACACAGGGAAATAAACAAAACCATATGAAACAAAATGCAGGAATAAGGATAATGCCATATGCTGAACCAAATGAGAATAGCAAGAGTATAACCCAAGGAAGCAAAGAGGGTAACAACAAAACAATACAGTCAGGTACAAATATTCATCAACTACAAGATGGAGAAAGAAGTTTAAAAGAATCAGAGAGAAACAAAATAGATACAAAGCATACTGAAGAAACAAGTTCTAGTATCACACAAATTACAGGAATCGGCACAACCCAATCGCCACAAAGCCTAGCATTACTACATGATGAGTTAACCATGCTTAAGTCACATACTACACTGGTAGCACAGTTGTCGTACACAAGTCTAATGCACCAAGTAATAAATAGTCCAAGGATTAACATAGAACCAAATATGGGAGGAAGAGGACTAGAAAGTTTCACAAGTATGCTTCAAACACCATCAGCATATAATAATTCAATGATACTAACTACGAGCAGAGTTTGTGAACAAGACATGCTGCTGGAAGACAGAAACAATGACCTATTAATCCCAAGCAAACATTACAGTTACCAAGAATTTGATGAAATCTACAACAGTGCAAGGATCACACCAGAGATTCCAGTTGACAAAACTATGGAGGAATTGTACAAATTACAAAACACACATTTGAAATCACAGGGAATTCCTACAAGCTGGGCCACTCAGAACAGAGATCAAGAGGACTTTGAAAGTGATCAGCCATACAATGAAAACTTTCATGAGCAAGATATTGAAGAGCAACAAAAAAGACCTGAAGCAACAGAAATTTCAGGGATACAACAGCAGCAAACAGAGGCTGAAATGAATGATAATTTAAATTTAGCTACTAACAACGGGGAGGAATTAAGTGAGGAAGACATTGACAATTTCTTACAAAATGAAGAGGAGAGCAGTTTACCAATAGATGATAAACACATACCTAAGCTAGGAATGAAGTTCAAATCACATACAGAAGTTAGAGGCTTCTTCAACTTCTATGCATACCTAGCCGGTTTTTCTGTTGTGATTGCGCACCACTACAAGACAACAAGCAAGAAAAGACAAGGTGAAATTACAAAGTACACATACAAATGCAACTTGCAAGGCAAAAATGAACCAGCAAACAAGAAGAAGAGAAATGAACAAGTTACTGAACAGCAGAGGGAAACAGTAGTCCTAGTCAAAACAAATTGCAAATGTACAATGGTAGCAAAAGAAGTTGGACAGTTTTGGCAAATATCAAGGCTTGATCTGAATCATAACCATGCACTTTGCCCAAGAAGAGAAGCTAAATTTCTGAGGTCTCATAAGGATATGACAGAGGAAGAAAAGAGACTAATAAGGACACTAAAAGAGTGCAACATACCAACTAGGAGCATGATTGTGATATTATCATTTCTCCGAGGTGGCTTGGCAGCACTACCCTACACCAAGAAGAATCTAATGTGGAAGAATAGAGCTCAGTTTGTGCCTGTCTACTTCAAATATGATTTCTGCCCTTTTATACAAAGCACAGCGCTGAGTGAGGGAACAAATAGCAGATTCAAAAGAGGAGTTGGACCACAACACAGTGTGATGAGTTTTATGAAGGAATATGAGAACATAAATGATACTATCTTTGATACTGAGTACAGCAAAGATTTCCAATCAAGGACAAAAATGCCAAAAACACTATGGTTCAACTATCTCATTGAAGAGCAGGCATCGGAACTATATAATCTAGACATATTCAGAAAATTCCAAAATGAATTAAAGGATACTTTAAGGTTGCAAGTATCTGTGATACAACAGGGCAAAGTGTATGAAGTGTTTGTGTCACCTAATAGCATCCAGCAAGAATATAGACAAAGGAAACATATAGTGATCATTGACTTACCAAATGAAAACTTCGGTTGCATTTGTGGGAAGTTCTCTAAGGATGGAATGCTATGTTCACATATCCTGAAAGTGATGTTGGAACTCAATGTGAGAAAAATTCCAGAAAAATACATTATTGATAGATGGAGAAAAAAAGAAAAGAAGGAGAAAGTGAAAGGCAGCATACATACAGATGCAACAGACAACTCTGTTCTGATGTTTAATGTTCTATCAAGGAAAGGTGCTGACATAGCATCAAAAGCATCAAAAAGAAAAAGAACATATCAGTTCATGATGGAGGAACTTGAGAAATTAGAAATGAATGTGCAATTGATGATTGAACAGGAGGCCGAAACACACCTGTCACAAGATGAAAGCAACACAGTACAAAATGATACTGTGCAGCAAGCAGAAGAAGAGATAATAGAAGAAGTGGAAATAGAAGACCCAGATTTGGCCAATACTAAAGGAAGAAAACCAAAAAGATATAGAAGAATAGTAGAGAAGATGATAGAAACTTCAAAAAGGAAAAGTAAAGATGAGCAACACACAACAGAAACAAGAACAAGTGAGATAACCAATACAGGGAACAAGCAAGAAGAGATGAAAACATCAAAAACTACAAAAAGAAGAAAGAAAAACAATACTCAAGAGGAAACTCCTAAAGAGAAGTTGCATGCAAAGACAAGCTGA
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| Protein seq | MESEKKKAKKKREEEEPKSKIKSEEKIKTSRSKQELNSISEHKQKVSFETQGNKQNHMKQNAGIRIMPYAEPNENSKSITQGSKEGNNKTIQSGTNIHQLQDGERSLKESERNKIDTKHTEETSSSITQITGIGTTQSPQSLALLHDELTMLKSHTTLVAQLSYTSLMHQVINSPRINIEPNMGGRGLESFTSMLQTPSAYNNSMILTTSRVCEQDMLLEDRNNDLLIPSKHYSYQEFDEIYNSARITPEIPVDKTMEELYKLQNTHLKSQGIPTSWATQNRDQEDFESDQPYNENFHEQDIEEQQKRPEATEISGIQQQQTEAEMNDNLNLATNNGEELSEEDIDNFLQNEEESSLPIDDKHIPKLGMKFKSHTEVRGFFNFYAYLAGFSVVIAHHYKTTSKKRQGEITKYTYKCNLQGKNEPANKKKRNEQVTEQQRETVVLVKTNCKCTMVAKEVGQFWQISRLDLNHNHALCPRREAKFLRSHKDMTEEEKRLIRTLKECNIPTRSMIVILSFLRGGLAALPYTKKNLMWKNRAQFVPVYFKYDFCPFIQSTALSEGTNSRFKRGVGPQHSVMSFMKEYENINDTIFDTEYSKDFQSRTKMPKTLWFNYLIEEQASELYNLDIFRKFQNELKDTLRLQVSVIQQGKVYEVFVSPNSIQQEYRQRKHIVIIDLPNENFGCICGKFSKDGMLCSHILKVMLELNVRKIPEKYIIDRWRKKEKKEKVKGSIHTDATDNSVLMFNVLSRKGADIASKASKRKRTYQFMMEELEKLEMNVQLMIEQEAETHLSQDESNTVQNDTVQQAEEEIIEEVEIEDPDLANTKGRKPKRYRRIVEKMIETSKRKSKDEQHTTETRTSEITNTGNKQEEMKTSKTTKRRKKNNTQEETPKEKLHAKTS |
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| Function | Protein FAR1-RELATED SEQUENCE 3 [UniProtKB/Swiss-Prot:Q9ZVC9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_06g0020380 | OsIR64_06g0020380.01 | Chr06 | 24212484 | 24220052 | + | NAM | ||
| CDS seq | ATGGAGAGCGAAAAGAAAAAGGCGAAGAAGAAAAGAGAAGAAGAAGAACCAAAATCCAAGATCAAATCTGAAGAAAAAATCAAAACATCAAGATCCAAACAAGAATTGAACTCAATTTCAGAACATAAACAGAAAGTTAGCTTCGAGACACAGGGAAATAAACAAAACCATATGAAACAAAATGCAGGAATAAGGATAATGCCATATGCTGAACCAAATGAGAATAGCAAGAGTATAACCCAAGGAAGCAAAGAGGGTAACAACAAAACAATACAGTCAGGTACAAATATTCATCAACTACAAGATGGAGAAAGAAGTTTAAAAGAATCAGAGAGAAACAAAATAGATACAAAGCATACTGAAGAAACAAGTTCTAGTATCACACAAATTACAGGAATCGGCACAACCCAATCGCCACAAAGCCTAGCATTACTACATGATGAGTTAACCATGCTTAAGTCACATACTACACTGGTAGCACAGTTGTCGTACACAAGTCTAATGCACCAAGTAATAAATAGTCCAAGGATTAACATAGAACCAAATATGGGAGGAAGAGGACTAGAAAGTTTCACAAGTATGCTTCAAACACCATCAGCATATAATAATTCAATGATACTAACTACGAGCAGAGTTTGTGAACAAGACATGCTGCTGGAAGACAGAAACAATGACCTATTAATCCCAAGCAAACATTACAGTTACCAAGAATTTGATGAAATCTACAACAGTGCAAGGATCACACCAGAGATTCCAGTTGACAAAACTATGGAGGAATTGTACAAATTACAAAACACACATTTGAAATCACAGGGAATTCCTACAAGCTGGGCCACTCAGAACAGAGATCAAGAGGACTTTGAAAGTGATCAGCCATACAATGAAAACTTTCATGAGCAAGATATTGAAGAGCAACAAAAAAGACCTGAAGCAACAGAAATTTCAGGGATACAACAGCAGCAAACAGAGGCTGAAATGAATGATAATTTAAATTTAGCTACTAACAACGGGGAGGAATTAAGTGAGGAAGACATTGACAATTTCTTACAAAATGAAGAGGAGAGCAGTTTACCAATAGATGATAAACACATACCTAAGCTAGGAATGAAGTTCAAATCACATACAGAAGTTAGAGGCTTCTTCAACTTCTATGCATACCTAGCCGGTTTTTCTGTTGTGATTGCGCACCACTACAAGACAACAAGCAAGAAAAGACAAGGTGAAATTACAAAGTACACATACAAATGCAACTTGCAAGGCAAAAATGAACCAGCAAACAAGAAGAAGAGAAATGAACAAGTTACTGAACAGCAGAGGGAAACAGTAGTCCTAGTCAAAACAAATTGCAAATGTACAATGGTAGCAAAAGAAGTTGGACAGTTTTGGCAAATATCAAGGCTTGATCTGAATCATAACCATGCACTTTGCCCAAGAAGAGAAGCTAAATTTCTGAGGTCTCATAAGGATATGACAGAGGAAGAAAAGAGACTAATAAGGACACTAAAAGAGTGCAACATACCAACTAGGAGCATGATTGTGATATTATCATTTCTCCGAGGTGGCTTGGCAGCACTACCCTACACCAAGAAGAATCTAATGTGGAAGAATAGAGCTCAGTTTGTGCCTGTCTACTTCAAATATGATTTCTGCCCTTTTATACAAAGCACAGCGCTGAGTGAGGGAACAAATAGCAGATTCAAAAGAGGAGTTGGACCACAACACAGTGTGATGAGTTTTATGAAGGAATATGAGAACATAAATGATACTATCTTTGATACTGAGTACAGCAAAGATTTCCAATCAAGGACAAAAATGCCAAAAACACTATGGTTCAACTATCTCATTGAAGAGCAGGCATCGGAACTATATAATCTAGACATATTCAGAAAATTCCAAAATGAATTAAAGGATACTTTAAGGTTGCAAGTATCTGTGATACAACAGGGCAAAGTGTATGAAGTGTTTGTGTCACCTAATAGCATCCAGCAAGAATATAGACAAAGGAAACATATAGTGATCATTGACTTACCAAATGAAAACTTCGGTTGCATTTGTGGGAAGTTCTCTAAGGATGGAATGCTATGTTCACATATCCTGAAAGTGATGTTGGAACTCAATGTGAGAAAAATTCCAGAAAAATACATTATTGATAGATGGAGAAAAAAAGAAAAGAAGGAGAAAGTGAAAGGCAGCATACATACAGATGCAACAGACAACTCTGTTCTGATGTTTAATGTTCTATCAAGGAAAGGTGCTGACATAGCATCAAAAGCATCAAAAAGAAAAAGAACATATCAGTTCATGATGGAGGAACTTGAGAAATTAGAAATGAATGTGCAATTGATGATTGAACAGGAGGCCGAAACACACCTGTCACAAGATGAAAGCAACACAGTACAAAATGATACTGTGCAGCAAGCAGAAGAAGAGATAATAGAAGAAGTGGAAATAGAAGACCCAGATTTGGCCAATACTAAAGGAAGAAAACCAAAAAGATATAGAAGAATAGTAGAGAAGATGATAGAAACTTCAAAAAGGAAAAGTAAAGATGAGCAACACACAACAGAAACAAGAACAAGTGAGATAACCAATACAGGGAACAAGCAAGAAGAGATGAAAACATCAAAAACTACAAAAAGAAGAAAGAAAAACAATACTCAAGAGGAAACTCCTAAAGAGAAGTTGCATGCAAAGACAAGCTGA
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| Protein seq | MESEKKKAKKKREEEEPKSKIKSEEKIKTSRSKQELNSISEHKQKVSFETQGNKQNHMKQNAGIRIMPYAEPNENSKSITQGSKEGNNKTIQSGTNIHQLQDGERSLKESERNKIDTKHTEETSSSITQITGIGTTQSPQSLALLHDELTMLKSHTTLVAQLSYTSLMHQVINSPRINIEPNMGGRGLESFTSMLQTPSAYNNSMILTTSRVCEQDMLLEDRNNDLLIPSKHYSYQEFDEIYNSARITPEIPVDKTMEELYKLQNTHLKSQGIPTSWATQNRDQEDFESDQPYNENFHEQDIEEQQKRPEATEISGIQQQQTEAEMNDNLNLATNNGEELSEEDIDNFLQNEEESSLPIDDKHIPKLGMKFKSHTEVRGFFNFYAYLAGFSVVIAHHYKTTSKKRQGEITKYTYKCNLQGKNEPANKKKRNEQVTEQQRETVVLVKTNCKCTMVAKEVGQFWQISRLDLNHNHALCPRREAKFLRSHKDMTEEEKRLIRTLKECNIPTRSMIVILSFLRGGLAALPYTKKNLMWKNRAQFVPVYFKYDFCPFIQSTALSEGTNSRFKRGVGPQHSVMSFMKEYENINDTIFDTEYSKDFQSRTKMPKTLWFNYLIEEQASELYNLDIFRKFQNELKDTLRLQVSVIQQGKVYEVFVSPNSIQQEYRQRKHIVIIDLPNENFGCICGKFSKDGMLCSHILKVMLELNVRKIPEKYIIDRWRKKEKKEKVKGSIHTDATDNSVLMFNVLSRKGADIASKASKRKRTYQFMMEELEKLEMNVQLMIEQEAETHLSQDESNTVQNDTVQQAEEEIIEEVEIEDPDLANTKGRKPKRYRRIVEKMIETSKRKSKDEQHTTETRTSEITNTGNKQEEMKTSKTTKRRKKNNTQEETPKEKLHAKTS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_06g0020380 | OsIR64_06g0020380.02 | Chr06 | 24212445 | 24219145 | + | IsoSeq | ||
| CDS seq | ATGGTAGATCGACTCAGCTATATGAGGAATATGGTGACTGTATCAGTTTTGACACAACGTATAGAACAAACAGATACAATATGCCATTTGCACCGTTTGTTGGTGTTACAGGACATGGGTCAACTTGCTTGTTTGGTTGTGCAT |
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| Protein seq | MVDRLSYMRNMVTVSVLTQRIEQTDTICHLHRLLVLQDMGQLACLVVH |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr06 | 24212586 | 24215475 | + | OsIR64_06g0020380.02 | OsIR64_06g0020380.02,OsIR64_06g0020380.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.432730 | 1.585552 | 0.986769 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0597800 | SBH | 0.999009 | 1.999418 | 1.365252 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g36970 | SBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0597800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0019820 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0021680 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0015200 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0015800 | SBH | 0.030823 | 0.116922 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0020940 | RBH | 0.570616 | 17.879639 | 11.920716 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0365600 | RBH | 2.0760085 | 40.907898 | 0.455935 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0014060 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0317800 | SBH | 0 | 0 | 0.015598 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0037530 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0019900 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0019510 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0021160 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0037220 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G018570 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0018710 | SBH | 0.0 | 0.0 | 0.0 |
