Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_05g0025590 | OGI:05074310 | 12/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr05:28490250-28494654 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GCGAAGAAAGGTAATGGTTCACATCATCAGGTGACAAGTGCCAGCAGTAACAAGGTAACTACTTTAACAATGGGATGAAAACGTAAAGTATGGTTATGAATAAGGCCGACTGCTGTCGACCTACACAAGTCTCTGTAACATGAGAAATGCTATCAAAGGTTCAGACTTTCAGCTACACAATGGATGTATCAGCATCCTTGACAGTCAAGCCACTTGTGCGGCAAGATAGACTGCAAGACGCTTCTCTTCAAATGAGTACTCGGTGTCCTCTTGTGAAGTCAGCTCCGGTTCGTCATAAGAGAGTACAGAAACAGCTTTTGCGGTAAGAACAGGCGTCACTGCCATTTGCATATGAGGGCTCACTGTCATCGGAGTCGTAGGAACTGGTGCAAATGTCTTGGGAGTCCTGTTCTCTTCAGTACCACCAGTGGAGATTGGACGCACAGGAGCTGAGGATATGTTTCCAGGTGTAATCTGAGAGAAGGGCTTCCGGGGTGTCTCCATCTCAAGAAGAGTGCTCGAGTTGGAAGATGGAAATAACTTCCTGATAGGGAGACCAACAGTGTCTAAACCTTTATGACCTGAGTTTATTTTTGAGATCAGAGATAGTCAGATCGTACTACATACTAAGTAAAAATTTAGAAATATTGCTTCAGATATATTTAAGTCGAAGTTACCAGGGGAAGGAGTGTTGATATCTTCCGTTTTCTTGGTTGCACGAATAGTCTTTGAATGAAGTATCTCTGATTTAGGAGGTTGAACTCCAGGTGTGGAGTTTCTGGGTACCTTCTTAGTGCTGCGAGATTTTGAAGAGGTTGGCTTTGATCCATAAAGTGCCTCCTGCTCAGCTTTGCGTTGATCTTGAAGCTTCTTTTGATCCTACAATTACTCAGATTTCAGATCTCACCCACGTTACCACGTAAGATGGTAACAAAAGCACACAAATTAGGATACAGCTAGTACCCTTTGCCTCTTCCTTTCCTGCTCTTTCTCTTGACGAACAACCATGTATTCTTCAAGCATCAATATAAGTCGGACCTGCAAACATTGTACGACACGAGTTTTGGCAATTCTCAAAACTGGCTTTGTAAATAATACATAAAATAAACGGCATGAATAGAGAAATATACGCCATCATATGTGAACTTATTGCCTCTTTCAGTTTCCCAAGCTCTGGTTTTTGTTTCAAGAACATCTACCATTCCTGTCCACAACACAATAGCAGCAAATCAGGAGCAGAAATGATAAGAAATTAAGAATGAAAGCATAACATTGTGTTTAATAATTGATTGTCACCTGGAATCTTGCTAACCAGAACACGCGCTTTTTCAGCCCTCTTAAGCATAATGTGTGCACCTCTCCCAGCATTATACCGGTTGTCATCCTGATCATGTCATGCGGACACCGCAATCAGCAGCAGGTGCGGAAAAAAAATCTTTTCATATAAATTGTTCTGATAGGACAGTACTTTGTTGTAATCTTCCAGCCAAGCCTCTTCCTCACGTGCATTTAGCCACTTCTCAACTCGCTCGAGAATGTCCTTCCTGCTAAAAGCTTCCTCTTTCACTGTTGAAATATAAGCCTCAATTTGCTCGAGCAACAAAGAGGGATCAATAGCCCCTGAAATGGAAAGAGTGAAGACATATTTTGGGCAATAAAACATTTTACTAAATAAACAGCATTAACAGCTTAACACACATGACACATCCTCTCAACGGAATGCATGAGCAAAGGAGGTAGGAGGATCAATTAACTGAAACTACCTTCAAGAACTTGCACAGAAATCTAAGGGTGTGTTCGGATGCCCCTTTTCCCAACTCCTCTCTCTCTCGTTTTCCGCGCGCACGCTTTTCAAACTGCTAAACGGTACGTTTTTTGCAAAAAAAAAGGTTCTATATGAAAGTTGCTTAAAAAATCAAATTAATCCATTTTTTTTAAAAAAATAGCTAATACTTAATTAATCACGCGCTAATGAACCACTCCATTTTCCGTGCAGAGGGATCCGGTTGGGATCTAGGAAAAGCGAACACACCCAGGGAATCATTCCATAACATATTACCTGCTTCAATGGCCTCAATTGTGAACTGAGTTGCATAACCTTCCTCTCCAACTAAATGTGCCCGTCGTCGATGTTCTTCTAGTTCTGTTTTCTTCTTGAGAACAAGCTCCTTCATTTTGCTTGCTTTGTGCTGTTCAAGCCTTAATACCTCAGCTTCCACCTGGATCAAAGAATATCATGTCCTCTGACTCTAGTATCATTATCTCAGTAGAAAACAGAAAATGACAACCACAAGACTCACGAAAGCAAGTTCTCCAAAAGATCATTAACTCACATAGTTGAGGAACTCAATGGAAAGGGTGTTCTGTTCTGTTAATTCAGCCTCTGAAGCAGCAATATTACATGTTATATTCTGGTATGCCTGCTGCTCTTCAAATGGCGTATCCATTAGATTCCATAGTTCTAGCAAGGTAGATGCAAGATCTTGAAGCTGGCAGAGCTAATACAGTTAGTTGAAAGCAGATATATACCATTTGGCCATTCCCTGAATTGAAATAGTAAGATGCAGACCTTCTGCATCCTCTGCATTTTTGTTTCACGAAGTCTCTGAATCGCCAATGCTAGCATCTCAATTGTAGTGTTGCTTATATTCCTTGGCCCTTCAGCTTCATCAAGACTAGGGTGTATTTCAGATATTGTTTTCTTGAAGTCGACACCAAGTACTACACATAAAGAATGTAAAGTCTTCAAATATTCCATAACTTGCTTTACCCTCTCACCCTATCAGAATTCAGAAATTTAATAACTGAATCAGAATACATTAGAAAATAGAAATTGAAAAGGAATTCAAATAATACATAGAGCTAAAGGCTTCAAGAAGAACCTTCTCCTTTTCAAGGGACTTCAGCTCCACCCTTAACTCTTCAAGCTTTCTTAATGATAGATCAGATTGATCCACAGACACTTTAAAAGAGTCAAAATTTGCTGGCCTTATCTCAGATGAGATCTTCTTTATCCTTCCTACGACATCAAGAAACTGGTTCCATCTTTCAACCTTCTTCCTCTTCATCTCTTCTAGGTATGGTAATATTGCACCGAGCTCATCCCGTAATCCACATGCTTTCTGATTAGACTGATAAAACAATCAAAAACAAAGAACTAATTACTGCCTTACTGGTAGATCCTATTTCGCTACAGCATATTTCTACCTTTCAAGTTGGATAACTAAATAATACACATTAAATGAGCCCATCTGTGACTGTAATCATATACTACCTCCGTCTCAAGATATAGCAACCAGTACCAGATGGGATATAATCTAGAGGGTTGTGCTCCTTCCGGCTATTGGGTGTGGCAACTCCGTGGCACACACAACAATATAAGTCATTAGTGCATGATTAATTAAGAATTAATTATTATAAACTCAAAAATTGGGTTTATTTGTTTTTTAGAATAAATTTGTATGCAAAAAGTTTTTGCAAAACACACACTGCTTACCAGTTCGGAAAATATGCTAACGGAAAATGATGAAGTTACCATGCTTGAATACAGGCGAAAGGTAGTATACGAAGAACATATGAATTCATAGCCTAATAATACTTCGATAATATCACAATACAATGGTGGGTAGTGTTTTTGAATCGGAGAAACGGCTAAATTCTGATGCGCCCCAAACCATTATAGTACCATAACACAGTAAATCGTATCAACCATCAAAACATAAGCTCTTAAACGACAGAAACAGAAGCAAAAGTGACAGACCTGCCTGACGTGGACCGTCGTCTCGCCCATGGCGGAGCAGATGGCGGCGAGTTCAGCTTCAGATTGAGCGATCGCCTGCCGCAGCTGGGCGCGGGAGCGGTTCGCCTGGTCCACCTTCCTCCTGTACACCTCCAGGCACTCCTGCTCGAGCTCCAGCAGCATCCTGTCCCTCGCGGCCTCGGGCTCCCCGACCTCGTCCCAGATGACCTGCAACCACGAGCGATCTGAATCAGCGAGAGACCAACAAAACCTGTCACCGCCATCGCGGCAACAGCAGATCAGTCGACAGCGAGGCGCACCTGGAGCTCGTGCATGAGGGATCCGCATATGGTCTTCATCGGGAGGAGGCGCTCCTTCGGATTGCCGCTCCTCGTGAGGACGATACCACGCAGCCTGCAGGGGAATCAAACGGGGAGAGATTGATCGGCGTCAGAATTAGGGTTGGCACGATCAACCAGCAGTAACGCCTACGGCCTCGAGTTCACTCACCAGTCTCGGTGGCTCGGCTCGACGGAGGGCGATACGGGAGGCCGAAACGAGGGCACCGCTGCGTCGTCCTCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTGGATTTGGCCGGAGACGGCCGCGCGATTTTGGGGGAAATGATGAGGGATT
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| CDS seq | ATGAAGACCATATGCGGATCCCTCATGCACGAGCTCCAGGTCATCTGGGACGAGGTCGGGGAGCCCGAGGCCGCGAGGGACAGGATGCTGCTGGAGCTCGAGCAGGAGTGCCTGGAGGTGTACAGGAGGAAGGTGGACCAGGCGAACCGCTCCCGCGCCCAGCTGCGGCAGGCGATCGCTCAATCTGAAGCTGAACTCGCCGCCATCTGCTCCGCCATGGGCGAGACGACGGTCCACGTCAGGCAGTCTAATCAGAAAGCATGTGGATTACGGGATGAGCTCGGTGCAATATTACCATACCTAGAAGAGATGAAGAGGAAGAAGGTTGAAAGATGGAACCAGTTTCTTGATGTCGTAGGAAGGATAAAGAAGATCTCATCTGAGATAAGGCCAGCAAATTTTGACTCTTTTAAAGTGTCTGTGGATCAATCTGATCTATCATTAAGAAAGCTTGAAGAGTTAAGGGTGGAGCTGAAGTCCCTTGAAAAGGAGAAGGGTGAGAGGGTAAAGCAAGTTATGGAATATTTGAAGACTTTACATTCTTTATGTGTAGTACTTGGTGTCGACTTCAAGAAAACAATATCTGAAATACACCCTAGTCTTGATGAAGCTGAAGGGCCAAGGAATATAAGCAACACTACAATTGAGATGCTAGCATTGGCGATTCAGAGACTTCGTGAAACAAAAATGCAGAGGATGCAGAAGCTCTGCCAGCTTCAAGATCTTGCATCTACCTTGCTAGAACTATGGAATCTAATGGATACGCCATTTGAAGAGCAGCAGGCATACCAGAATATAACATGTAATATTGCTGCTTCAGAGGCTGAATTAACAGAACAGAACACCCTTTCCATTGAGTTCCTCAACTATGTGGAAGCTGAGGTATTAAGGCTTGAACAGCACAAAGCAAGCAAAATGAAGGAGCTTGTTCTCAAGAAGAAAACAGAACTAGAAGAACATCGACGACGGGCACATTTAGTTGGAGAGGAAGGGGCTATTGATCCCTCTTTGTTGCTCGAGCAAATTGAGGCTTATATTTCAACAGTGAAAGAGGAAGCTTTTAGCAGGAAGGACATTCTCGAGCGAGTTGAGAAGTGGCTAAATGCACGTGAGGAAGAGGCTTGGCTGGAAGATTACAACAAAGATGACAACCGGTATAATGCTGGGAGAGGTGCACACATTATGCTTAAGAGGGCTGAAAAAGCGCGTGTTCTGGTTAGCAAGATTCCAGGAATGGTAGATGTTCTTGAAACAAAAACCAGAGCTTGGGAAACTGAAAGAGGCAATAAGTTCACATATGATGGCGTCCGACTTATATTGATGCTTGAAGAATACATGGTTGTTCGTCAAGAGAAAGAGCAGGAAAGGAAGAGGCAAAGGGATCAAAAGAAGCTTCAAGATCAACGCAAAGCTGAGCAGGAGGCACTTTATGGATCAAAGCCAACCTCTTCAAAATCTCGCAGCACTAAGAAGGTACCCAGAAACTCCACACCTGGAGTTCAACCTCCTAAATCAGAGATACTTCATTCAAAGACTATTCGTGCAACCAAGAAAACGGAAGATATCAACACTCCTTCCCCTGGTCATAAAGGTTTAGACACTGTTGGTCTCCCTATCAGGAAGTTATTTCCATCTTCCAACTCGAGCACTCTTCTTGAGATGGAGACACCCCGGAAGCCCTTCTCTCAGATTACACCTGGAAACATATCCTCAGCTCCTGTGCGTCCAATCTCCACTGGTGGTACTGAAGAGAACAGGACTCCCAAGACATTTGCACCAGTTCCTACGACTCCGATGACAGTGAGCCCTCATATGCAAATGGCAGTGACGCCTGTTCTTACCGCAAAAGCTGTTTCTGTACTCTCTTATGACGAACCGGAGCTGACTTCACAAGAGGACACCGAGTACTCATTTGAAGAGAAGCGTCTTGCAGTCTATCTTGCCGCACAAGTGGCTTGA
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| Protein seq | MKTICGSLMHELQVIWDEVGEPEAARDRMLLELEQECLEVYRRKVDQANRSRAQLRQAIAQSEAELAAICSAMGETTVHVRQSNQKACGLRDELGAILPYLEEMKRKKVERWNQFLDVVGRIKKISSEIRPANFDSFKVSVDQSDLSLRKLEELRVELKSLEKEKGERVKQVMEYLKTLHSLCVVLGVDFKKTISEIHPSLDEAEGPRNISNTTIEMLALAIQRLRETKMQRMQKLCQLQDLASTLLELWNLMDTPFEEQQAYQNITCNIAASEAELTEQNTLSIEFLNYVEAEVLRLEQHKASKMKELVLKKKTELEEHRRRAHLVGEEGAIDPSLLLEQIEAYISTVKEEAFSRKDILERVEKWLNAREEEAWLEDYNKDDNRYNAGRGAHIMLKRAEKARVLVSKIPGMVDVLETKTRAWETERGNKFTYDGVRLILMLEEYMVVRQEKEQERKRQRDQKKLQDQRKAEQEALYGSKPTSSKSRSTKKVPRNSTPGVQPPKSEILHSKTIRATKKTEDINTPSPGHKGLDTVGLPIRKLFPSSNSSTLLEMETPRKPFSQITPGNISSAPVRPISTGGTEENRTPKTFAPVPTTPMTVSPHMQMAVTPVLTAKAVSVLSYDEPELTSQEDTEYSFEEKRLAVYLAAQVA |
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| Function | 65-kDa microtubule-associated protein 3 [UniProtKB/Swiss-Prot:Q9FHM4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_05g0025590 | OsIR64_05g0025590.01 | Chr05 | 28490250 | 28494654 | - | NAM | ||
| CDS seq | ATGAAGACCATATGCGGATCCCTCATGCACGAGCTCCAGGTCATCTGGGACGAGGTCGGGGAGCCCGAGGCCGCGAGGGACAGGATGCTGCTGGAGCTCGAGCAGGAGTGCCTGGAGGTGTACAGGAGGAAGGTGGACCAGGCGAACCGCTCCCGCGCCCAGCTGCGGCAGGCGATCGCTCAATCTGAAGCTGAACTCGCCGCCATCTGCTCCGCCATGGGCGAGACGACGGTCCACGTCAGGCAGTCTAATCAGAAAGCATGTGGATTACGGGATGAGCTCGGTGCAATATTACCATACCTAGAAGAGATGAAGAGGAAGAAGGTTGAAAGATGGAACCAGTTTCTTGATGTCGTAGGAAGGATAAAGAAGATCTCATCTGAGATAAGGCCAGCAAATTTTGACTCTTTTAAAGTGTCTGTGGATCAATCTGATCTATCATTAAGAAAGCTTGAAGAGTTAAGGGTGGAGCTGAAGTCCCTTGAAAAGGAGAAGGGTGAGAGGGTAAAGCAAGTTATGGAATATTTGAAGACTTTACATTCTTTATGTGTAGTACTTGGTGTCGACTTCAAGAAAACAATATCTGAAATACACCCTAGTCTTGATGAAGCTGAAGGGCCAAGGAATATAAGCAACACTACAATTGAGATGCTAGCATTGGCGATTCAGAGACTTCGTGAAACAAAAATGCAGAGGATGCAGAAGCTCTGCCAGCTTCAAGATCTTGCATCTACCTTGCTAGAACTATGGAATCTAATGGATACGCCATTTGAAGAGCAGCAGGCATACCAGAATATAACATGTAATATTGCTGCTTCAGAGGCTGAATTAACAGAACAGAACACCCTTTCCATTGAGTTCCTCAACTATGTGGAAGCTGAGGTATTAAGGCTTGAACAGCACAAAGCAAGCAAAATGAAGGAGCTTGTTCTCAAGAAGAAAACAGAACTAGAAGAACATCGACGACGGGCACATTTAGTTGGAGAGGAAGGGGCTATTGATCCCTCTTTGTTGCTCGAGCAAATTGAGGCTTATATTTCAACAGTGAAAGAGGAAGCTTTTAGCAGGAAGGACATTCTCGAGCGAGTTGAGAAGTGGCTAAATGCACGTGAGGAAGAGGCTTGGCTGGAAGATTACAACAAAGATGACAACCGGTATAATGCTGGGAGAGGTGCACACATTATGCTTAAGAGGGCTGAAAAAGCGCGTGTTCTGGTTAGCAAGATTCCAGGAATGGTAGATGTTCTTGAAACAAAAACCAGAGCTTGGGAAACTGAAAGAGGCAATAAGTTCACATATGATGGCGTCCGACTTATATTGATGCTTGAAGAATACATGGTTGTTCGTCAAGAGAAAGAGCAGGAAAGGAAGAGGCAAAGGGATCAAAAGAAGCTTCAAGATCAACGCAAAGCTGAGCAGGAGGCACTTTATGGATCAAAGCCAACCTCTTCAAAATCTCGCAGCACTAAGAAGGTACCCAGAAACTCCACACCTGGAGTTCAACCTCCTAAATCAGAGATACTTCATTCAAAGACTATTCGTGCAACCAAGAAAACGGAAGATATCAACACTCCTTCCCCTGGTCATAAAGGTTTAGACACTGTTGGTCTCCCTATCAGGAAGTTATTTCCATCTTCCAACTCGAGCACTCTTCTTGAGATGGAGACACCCCGGAAGCCCTTCTCTCAGATTACACCTGGAAACATATCCTCAGCTCCTGTGCGTCCAATCTCCACTGGTGGTACTGAAGAGAACAGGACTCCCAAGACATTTGCACCAGTTCCTACGACTCCGATGACAGTGAGCCCTCATATGCAAATGGCAGTGACGCCTGTTCTTACCGCAAAAGCTGTTTCTGTACTCTCTTATGACGAACCGGAGCTGACTTCACAAGAGGACACCGAGTACTCATTTGAAGAGAAGCGTCTTGCAGTCTATCTTGCCGCACAAGTGGCTTGA
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| Protein seq | MKTICGSLMHELQVIWDEVGEPEAARDRMLLELEQECLEVYRRKVDQANRSRAQLRQAIAQSEAELAAICSAMGETTVHVRQSNQKACGLRDELGAILPYLEEMKRKKVERWNQFLDVVGRIKKISSEIRPANFDSFKVSVDQSDLSLRKLEELRVELKSLEKEKGERVKQVMEYLKTLHSLCVVLGVDFKKTISEIHPSLDEAEGPRNISNTTIEMLALAIQRLRETKMQRMQKLCQLQDLASTLLELWNLMDTPFEEQQAYQNITCNIAASEAELTEQNTLSIEFLNYVEAEVLRLEQHKASKMKELVLKKKTELEEHRRRAHLVGEEGAIDPSLLLEQIEAYISTVKEEAFSRKDILERVEKWLNAREEEAWLEDYNKDDNRYNAGRGAHIMLKRAEKARVLVSKIPGMVDVLETKTRAWETERGNKFTYDGVRLILMLEEYMVVRQEKEQERKRQRDQKKLQDQRKAEQEALYGSKPTSSKSRSTKKVPRNSTPGVQPPKSEILHSKTIRATKKTEDINTPSPGHKGLDTVGLPIRKLFPSSNSSTLLEMETPRKPFSQITPGNISSAPVRPISTGGTEENRTPKTFAPVPTTPMTVSPHMQMAVTPVLTAKAVSVLSYDEPELTSQEDTEYSFEEKRLAVYLAAQVA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0552900 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g47970 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0552900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0026180 | RBH | 0.0 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0025990 | RBH | 0.0 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0025950 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0026000 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0025970 | RBH | 0.0 | 0.0 | 0.823012 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0427300 | SBH | 26.9470185 | 43.25416 | 44.836676 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0028110 | RBH | 0.0 | 1.228692 | 0.145393 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0438300 | SBH | 25.196882 | 23.600981 | 44.732086 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0025800 | SBH | 4.148189 | 2.434789 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0025700 | RBH | 0.0 | 1.227752 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0025900 | RBH | 5.895006 | 72.731033 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0025920 | RBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0025940 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G025390 | RBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0025940 | RBH | 0.0 | 0.000000 | 0.623999 |
