Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_05g0008120 | OGI:05021520 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr05:8245452-8250455 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ACGTGAAAAACTCTTACATTAAAAACTATGGATGCCAACCAGCAATGACCAGTATAGACGATTTGGTTACAAATGTAAGAGATACATTGGGTTATCGCACCTACTAGAAAAGACTAGAAGGCTAATAGCTAGGATAAGGCTAGAAGTCCTACTAGAATACTAATCTAACTAATTAAAAACTAATACAAACATATTACATGCTGAAATTCGGATAACATGTTTGATAATCTTCATCTTGAGACGAATTTCCCTTTTAGCATAAGCACCTTCATCCTCCAAACAACCTCATGCAGACAAACTATTGTGCGCCAATTAGTCACTTGGACTATAAAACTGTAACACCCTCGATTCAGAAGAGGTAGATCATATTTCAAATTTGCCATCGGCAATAAATCCTAAATCTATGGTATCAATTGGTGTGTGAACCAAACCGAGATGCGAAACCTGGTGCACAAACTTCAAACTCGCCATGGGAATAAAATCCTGAATCTTCTATATGAAACTCTTGTACTGAAAACGAAATATTTATATCTCCTGATGAAACCTCTTGGTATGCTGGGTTTGATGCTAGCAAAATCCACCAAAAATTTGATCACCTTGTAATCTAGACAGGAACAATGCTCCATATCAGCGACTTGAATGTGATGCTTCTTTTCTGCCTATCGGGTGCATGACATTATTAGTTTCTCCTCCTCAGTAGATGTGCCATCTCGTATCTTCACTTGCTATAACGATAATTTTGTGTCAATCCAATAGTGGTGGATCAAATTTCAAACTCGCCAGGAGCTTCTTTTCCTTCATTTGAAGTTGATGCTATCAAGACGCTCAATTCCGAATCCAAAATGTGCAGAACTTTTTCTCTTGCCTTTTATGGACCAAAAGTGACATAGTGATATATGAGTAGACTTGAGAAATGTTTTGGTTTTGTTCCCAATCAACTTCTTAGATCATCCATGTATTTCTTACGCTCGGTCTCTTTCCCTTCACCTAAGTAAGTACCTATGCAAATGAGAGCACACAGAACTCATGATGCAGTAATGTTTGTTCAAATATATAGCACGTAATCTTACATAGAAATAATGCATCTTTGGTTGATTAAGTAGCGGTTGCGGCGGAGATGGCTCATGGTGGAGATGGTAGTGGCGATTTGGCTTGGGAAAGAGGGGAAAAGATGTGACGGTGGCATCTATTTATATAGGAGGCATGAGAGCTATGATGTTTTTTTTCCATTATAATGCACCGGCACTTAACTAATAACAATAAAATAGTATATGCATTGAGCCCTTTGGCACCTAACGACATAGCTTAAAAGAATGGTATGAGATAAACTTTTATTAGACATTGGTTATATAGATTCATAGATTAATTTATTTTAAACTGCCGACCCATTAATTGATGAGTTGTTCTATTTTCCGCATAGTCATAATAAATTTCGCATAGTCACCTAGCTAACATTTCTTATTATGGGGTAAATATAATTTTTTAGGGTAATGGGGTAAATATAATTCTTCTTAATATTCCTCCTTGAAACTCTAGATACTCTTTTATTTATCTCTTATTTATTGTCTAATACTCCCTCCATTCCAAATTGATCTACATATAGGTTTTTTAAGGTTATTCTAAATGATCTACATATTTGTGTTCATTCATTAGGTCTATTCGTTATTTGTGCATTGGAGTAAATGGACATTGATGCATGCATCCATGCACACAAGTATTTATAACCCACATGCAATATCTTGATTTGCTATTGGCTAGGAGATAGTGGGGATGGTGCATGCATCTAGTTTGTTGCTAGAGTAAATATAGTATGAGAGAGTTATTAGCTTTTCTTGGTCTTGGTGTACCTATGAAATATGTAGATCAATTTGGAATGGAGGGAGTATAACATGTACATATTCTTTTAAGACAAGTAGATCTAGTCATCTAGAATCCACATATAAGTAGTCGGTAAAACTAAAATAGCATGGTTAGATTGTCTGTCAGTAAAGGTTGTGTCTATCAGTATACTATTATCGATGAGTTTTTCTGTGACACACCCTTTCTGTCAAGAAAGGGTTTCAATAGACAGAAAGGGTTTCAATAGACAATATGAGCTTTGTCAATATATGCATCGCCTGTTCATTTAGGTCATGATGTGGGGATACTTTACATATATATATTTGTACTACAATAAATGGCTTCTTGTGATTACTCACTAAAAAGAAGACATACCTTGTTTGCGATGCAAGATCATTATTTTGCTTGTTTGCATGTTTTGATATGTAGTTGAGGCACTGGTAGCCGACCTTCTAAATAGCCCAAAACTTCCTTACTTGATGGCCGCATGTGATGATCGAATTGGACGCAGAGAAGCCCAATGAGTATAACACGTTTCATCTGCTCCTCATCAAAGTCACCGTTTAGGCGTCGATCGACTGCATCAAGCAGTGAATTGCTGTAATACAATCTCCTAAACTTCTCAACGAGACCATTACCCTTGAGACACTGAGGTATTTCACCGGAAGCAATCTCCAGAAGCACCACACCGAAGCTGTAAATATCAGACGCCGGACTGATACAGCCTGTGCTACAATATTGAGGGTCTATATATCTTGAAGACCCAAATATGGTCATTGGGCAAGAAGTTTTGTCAATGGGGACTTGCCTCACCAGCCCAAAGTCACCAACTTTAGCATTGAATTCTTCATCTAGCATCACGTTGCCAGGCTTAATATCCCTGTGCAGGACGCGCGGATGATTCCCATGCATATAGTTGAGAGCTGAGGCCATGCCAAGTGCTATCTTATACCTACAATTAATACATAGAAAATCAAAGTTAATTCAGCTGCAACATTAAATAATATCAGTTGACATGTGGTCCCATCGATCATGTTTTGGGGCATATATTGCATACCTTCTACTCCAACTTAGTATTGTATTTGCATAGTGAAGATGATAATCAAGGGTGCCATTGTGTATTAGTTCGTAGACAAGGAGAAGTTCCCCATTTTCGTCACACGAACCCACAAAGGGAACAAGATTGGGATGGCTCAGTTTGCTGATCACTTTGATCTCATTATCATAATCTCGTGCCGCTCGTTCATGATCTGCAACCCTCATAATCCTTTTCACAGCCACGGGAGTTGTCCAATTCATTAGCTGAGCCTTGTAGACAGCACCAAATGCACCCTGACCGATCTTACGGCTGTCCGAGAAGTTCTCGGTTGCAGCTAACAAGTGTGCATATGAGAATCGTCGTGTGTTGTGCACTGATACGAATACAATTCCATTGTGAGTTTGTGACAATAAATGATTTATTTGAATGGACTAACAGTCTATTCATAGTGTAAGAACGACGAAATGATAGCACCTACCTTCTTCTTCCATAGGCATCTCGATTAATATATCTGTTTTTCTATTGAGGCGGTGGTGGTTGAACCTGGCCCGCTTGCGCATAAAGCAAACCAACAAGACAACCATGCCAGCCACTACTGCTATTGCTGCAGTGATAGATCCAGCTACTACCTTTGTACTAAAACTTTTAGTATTGAAGCCAGAACCTTGTTGGTTACCCGCAGGCACAAAACTAAAAAAAGTTTTAGTAAATTAAGAGTACGTGCAAAATGAATTGAAAATAATACAATGTTTTGTTATGAGTGGGTATCTTTACCAGTATAATCATTAGTAGAAGTGAACTACACCATTGATTTATGAGTTCTACCGCAAGTTCTATCAGTAGCAGTAGCTGAGATGATAGCATATATAGATACATTCCATTAAATTAGAAAAAGAAAATTTTTACTCCCAGGAGAGACCATAATTTTTACTACCAATAGAGACCATAAATTAAAGTTCTATTTATATGTGATTTTCATCGAAATCTTGTGGTAACTATACACTTCAAAAATGTCAGGAAAATAAGAAAACACGGGTTTATACACGTCATCAGGACTAATTTAGATTTTATTATTTTGATATAATTACATGTATAATTTTTAGTGTGTAATTAGTATAGGCTGGGCATATTTATATACTCCTTCTGTTTTTTTTAATATATGACATCATTGACCTTTTAAAATACGTTTGACCATTCATCTTATTAAAAAAATTTATGTAATTATTATTTATTTTATTGTGATTTGATTTATCTTCAAATGTTCTTTAAACATGACTTAAAAGATCTTATATTTGCACAAAATTTCTTGAACAAAATAAATAGTCAAACGTTTGTCAAAAAAATCAATAACATTAAAAAAACGGAGGTAGTATGTAGTTTCTTGATCTAGACAAGTACTCCCTCCATCCAGTTGAACTACAAAGATAGCTATACTTAGATAGATGAAGTAGTAAATAAAAAGACGTGATGAGGATGTTGAATTATAGTCGAAGAAGTGAACTACCCACCATGAATTAATTTCGTCCTACCTATTTTGAAATTTTGAATGGATTTTGGATTATGCATGGAACCTCATGTGCGTATATGCATGCCATGCTTACACAATACGAGTTAAACTAAACTTAGATTGAGATCCTGATCTGCAATCGAGTCTACCGCGCCTTTGTCATTAACATGTGAGCTATTGTCCACATGTCAGTGATAAAGGCGTGGTGCAGTCGACTGCAGAGGATCCTCATCCAACTAACTCTCATTTCAATCGAAGGTGACACTGTTTTGCAACCAAGAAAAACAAGAGTAGCAGCATCTCAAACCTATAACTACAATATACTCACGGTGCATGGTTGTTCGACCTCGGCGGCGACGAAGACGGCGAAGGCGTTTGATAAACATTATTCTGAGATTTCCGTCTTGGATCCACAGTGAAAGTACTGGAGTTGTTGCCAGCCGTAGTCGAGCAATTCAAGACTGCATCCGATGTCGCAAGGAATAGAGTCAGAACAGAAAGAAGAACAGCTACATACTGGAGATGGAGTGCCATTGCCTCTCTCATAATACACAGCTGCTTAATTTCAGTTAGACACAGCCAATATTAAGCACTAGCTAGATCTCATCAACTGATGCTG
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| CDS seq | ATGGCACTCCATCTCCAGTATGTAGCTGTTCTTCTTTCTGTTCTGACTCTATTCCTTGCGACATCGGATGCAGTCTTGAATTGCTCGACTACGGCTGGCAACAACTCCAGTACTTTCACTGTGGATCCAAGACGGAAATCTCAGAATAATGTTTATCAAACGCCTTCGCCGTCTTCGTCGCCGCCGAGGTCGAACAACCATGCACCTTTTGTGCCTGCGGGTAACCAACAAGGTTCTGGCTTCAATACTAAAAGTTTTAGTACAAAGGTAGTAGCTGGATCTATCACTGCAGCAATAGCAGTAGTGGCTGGCATGGTTGTCTTGTTGGTTTGCTTTATGCGCAAGCGGGCCAGGTTCAACCACCACCGCCTCAATAGAAAAACAGATATATTAATCGAGATGCCTATGGAAGAAGAAGTGCACAACACACGACGATTCTCATATGCACACTTGTTAGCTGCAACCGAGAACTTCTCGGACAGCCGTAAGATCGGTCAGGGTGCATTTGGTGCTGTCTACAAGGCTCAGCTAATGAATTGGACAACTCCCGTGGCTGTGAAAAGGATTATGAGGGTTGCAGATCATGAACGAGCGGCACGAGATTATGATAATGAGATCAAAGTGATCAGCAAACTGAGCCATCCCAATCTTGTTCCCTTTGTGGGTTCGTGTGACGAAAATGGGGAACTTCTCCTTGTCTACGAACTAATACACAATGGCACCCTTGATTATCATCTTCACTATGCAAATACAATACTAAGTTGGAGTAGAAGGTATAAGATAGCACTTGGCATGGCCTCAGCTCTCAACTATATGCATGGGAATCATCCGCGCGTCCTGCACAGGGATATTAAGCCTGGCAACGTGATGCTAGATGAAGAATTCAATGCTAAAGTTGGTGACTTTGGGCTGGTGAGGCAAGTCCCCATTGACAAAACTTCTTGCCCAATGACCATATTTGGGTCTTCAAGATATATAGACCCTCAATATTGTAGCACAGGCTGTATCAGTCCGGCGTCTGATATTTACAGCTTCGGTGTGGTGCTTCTGGAGATTGCTTCCGGTGAAATACCTCAGTGTCTCAAGGGTAATGGTCTCGTTGAGAAGTTTAGGAGATTGTATTACAGCAATTCACTGCTTGATGCAGTCGATCGACGCCTAAACGGTGACTTTGATGAGGAGCAGATGAAACGTGTTATACTCATTGGGCTTCTCTGCGTCCAATTCGATCATCACATGCGGCCATCAAGTAAGGAAGTTTTGGGCTATTTAGAAGGTCGGCTACCAGTGCCTCAACTACATATCAAAACATGCAAACAAGCAAAATAA
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| Protein seq | MALHLQYVAVLLSVLTLFLATSDAVLNCSTTAGNNSSTFTVDPRRKSQNNVYQTPSPSSSPPRSNNHAPFVPAGNQQGSGFNTKSFSTKVVAGSITAAIAVVAGMVVLLVCFMRKRARFNHHRLNRKTDILIEMPMEEEVHNTRRFSYAHLLAATENFSDSRKIGQGAFGAVYKAQLMNWTTPVAVKRIMRVADHERAARDYDNEIKVISKLSHPNLVPFVGSCDENGELLLVYELIHNGTLDYHLHYANTILSWSRRYKIALGMASALNYMHGNHPRVLHRDIKPGNVMLDEEFNAKVGDFGLVRQVPIDKTSCPMTIFGSSRYIDPQYCSTGCISPASDIYSFGVVLLEIASGEIPQCLKGNGLVEKFRRLYYSNSLLDAVDRRLNGDFDEEQMKRVILIGLLCVQFDHHMRPSSKEVLGYLEGRLPVPQLHIKTCKQAK |
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| Function | L-type lectin-domain containing receptor kinase IX.2 [UniProtKB/Swiss-Prot:Q9LSL5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_05g0008120 | OsIR64_05g0008120.01 | Chr05 | 8247552 | 8250370 | - | NAM | ||
| CDS seq | ATGGCACTCCATCTCCAGTATGTAGCTGTTCTTCTTTCTGTTCTGACTCTATTCCTTGCGACATCGGATGCAGTCTTGAATTGCTCGACTACGGCTGGCAACAACTCCAGTACTTTCACTGTGGATCCAAGACGGAAATCTCAGAATAATGTTTATCAAACGCCTTCGCCGTCTTCGTCGCCGCCGAGGTCGAACAACCATGCACCTTTTGTGCCTGCGGGTAACCAACAAGGTTCTGGCTTCAATACTAAAAGTTTTAGTACAAAGGTAGTAGCTGGATCTATCACTGCAGCAATAGCAGTAGTGGCTGGCATGGTTGTCTTGTTGGTTTGCTTTATGCGCAAGCGGGCCAGGTTCAACCACCACCGCCTCAATAGAAAAACAGATATATTAATCGAGATGCCTATGGAAGAAGAAGTGCACAACACACGACGATTCTCATATGCACACTTGTTAGCTGCAACCGAGAACTTCTCGGACAGCCGTAAGATCGGTCAGGGTGCATTTGGTGCTGTCTACAAGGCTCAGCTAATGAATTGGACAACTCCCGTGGCTGTGAAAAGGATTATGAGGGTTGCAGATCATGAACGAGCGGCACGAGATTATGATAATGAGATCAAAGTGATCAGCAAACTGAGCCATCCCAATCTTGTTCCCTTTGTGGGTTCGTGTGACGAAAATGGGGAACTTCTCCTTGTCTACGAACTAATACACAATGGCACCCTTGATTATCATCTTCACTATGCAAATACAATACTAAGTTGGAGTAGAAGGTATAAGATAGCACTTGGCATGGCCTCAGCTCTCAACTATATGCATGGGAATCATCCGCGCGTCCTGCACAGGGATATTAAGCCTGGCAACGTGATGCTAGATGAAGAATTCAATGCTAAAGTTGGTGACTTTGGGCTGGTGAGGCAAGTCCCCATTGACAAAACTTCTTGCCCAATGACCATATTTGGGTCTTCAAGATATATAGACCCTCAATATTGTAGCACAGGCTGTATCAGTCCGGCGTCTGATATTTACAGCTTCGGTGTGGTGCTTCTGGAGATTGCTTCCGGTGAAATACCTCAGTGTCTCAAGGGTAATGGTCTCGTTGAGAAGTTTAGGAGATTGTATTACAGCAATTCACTGCTTGATGCAGTCGATCGACGCCTAAACGGTGACTTTGATGAGGAGCAGATGAAACGTGTTATACTCATTGGGCTTCTCTGCGTCCAATTCGATCATCACATGCGGCCATCAAGTAAGGAAGTTTTGGGCTATTTAGAAGGTCGGCTACCAGTGCCTCAACTACATATCAAAACATGCAAACAAGCAAAATAA
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| Protein seq | MALHLQYVAVLLSVLTLFLATSDAVLNCSTTAGNNSSTFTVDPRRKSQNNVYQTPSPSSSPPRSNNHAPFVPAGNQQGSGFNTKSFSTKVVAGSITAAIAVVAGMVVLLVCFMRKRARFNHHRLNRKTDILIEMPMEEEVHNTRRFSYAHLLAATENFSDSRKIGQGAFGAVYKAQLMNWTTPVAVKRIMRVADHERAARDYDNEIKVISKLSHPNLVPFVGSCDENGELLLVYELIHNGTLDYHLHYANTILSWSRRYKIALGMASALNYMHGNHPRVLHRDIKPGNVMLDEEFNAKVGDFGLVRQVPIDKTSCPMTIFGSSRYIDPQYCSTGCISPASDIYSFGVVLLEIASGEIPQCLKGNGLVEKFRRLYYSNSLLDAVDRRLNGDFDEEQMKRVILIGLLCVQFDHHMRPSSKEVLGYLEGRLPVPQLHIKTCKQAK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_05g0008120 | OsIR64_05g0008120.02 | Chr05 | 8245452 | 8250455 | - | IsoSeq | ||
| CDS seq | ATGGAGCATTGTTCCTGTCTAGATTACAAGGTGATCAAATTTTTGGTGGATTTTGCTAGCATCAAACCCAGCATACCAAGAGGTTTCATCAGGAGATATAAATATTTCGTTTTCAGTACAAGAGTTTCATATAGAAGATTCAGGATTTTATTCCCATGGCGA |
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| Protein seq | MEHCSCLDYKVIKFLVDFASIKPSIPRGFIRRYKYFVFSTRVSYRRFRILFPWR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.764067 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0231100 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g14220 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0231100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0008190 | RBH | 0.0 | 14.810863 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0008220 | RBH | 0.0 | 0.000000 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0008110 | RBH | 0.0 | 3.915422 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0008180 | RBH | 0.0 | 0.040291 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0008270 | RBH | 0.0 | 1.457515 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0120700 | RBH | 37.488981 | 41.5052395 | 33.8077965 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0119400 | RBH | 12.0431465 | 9.888938 | 11.4947115 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0008160 | RBH | 0.0 | 0.165996 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0008100 | RBH | 0.0 | 8.091041 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0008200 | RBH | 0.0 | 8.626015 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0008250 | RBH | 0.000000 | 0.773155 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0008230 | RBH | 0.0 | 0.468708 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G008010 | RBH | 0.0 | 1.508773 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0008300 | RBH | 0.0 | 16.014608 | 0.0 |
