Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_04g0028470 | OGI:04098390 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr04:33219719-33225863 | ||||||||
| Gene Symbol | prx58 | ||||||||||
| DNA seq | ACAATGCATCACCCATCAGCACCATTCTATCATCCATTCCGTCTCAGCTCAAAGAATCGGCTACAAAATCCCACCACAAAACATATAAACAACAAAAAGAAACCAAAAATAAAAAGAAAAGAAAAAAAACACCCTGCATCTGCGGCCGAAATTAATTAATCGTAGTACTACTACTACGTGTTTTTCTTTCACCATCCTACCCAGCTAAGTACTCCACTTTTTAAGTAGCAGAAGATGATATGCAAGTACTACGTAAACAAGCTAGTTGACGGCGGTGCAGACGCGGCGGATCTCGCCGTCGGAGCCGGTCTTGACGCCGATCCTGCCGAGCTTGGCCATGGCGGCGACGAAGGCGTCGAAGAAGGCGGTGGAGTTGGCGGCGAAGAGGTTGACGGTGGGGCGGGAGCGGCGGTCGGTGAAGAGGATCTGGTCGGAGGCGAGGAGGCCCTTGTTGTAGCGGAGGTTGTTGAAGTAGGCGTTGTCGAACGCCCGCGGCGTCGACACGTCCAGCATCGCGAACGCCGTCGGGCTGTAGTTGATCGGGCACACCCGCCGCATCGACCGCAGGAAGTCCAGGTTCATCGGCGGGTTGTACCCCAGCCGCTGCTTGAACGTGTAGATCCGCCGCACGAACTTGTCGCAGTGCGTCACCCCGATCGTGTGCGCCCCTGCAGTGCGTGTGCACCGTCAATATCAGAATCATTTCAGTGAGAAAAAAAACTACTCCCTCCGTTACACAATATAAGACTTTGTAGCATTAACCACATACATATAGATATTAATAAATCTAAACATATATATATATATATATTTAGATTCATTAATATCTAAATAAATATGAGTAATGCTAGAAAGTTTTATATCGTGAAACAGAGTAAGTAGAGGAAGTATTGTTTGTTCCGGTCTGTGCCTGTACAGTTGTTTTAACCTTTTTACTGTACTACTATATGCAGAGTCAGGAGTGGCTCTGGTTCGGTCAAAAGTTACCGCTAGTGGTTGTGGTGGTTTCGGTTTTGTCACAAGGGTAGGGCCTCTTGTGTCCAAATCTAGACACAAAGATTGTTTAAACTAAGCTTAGGATCTGACAGGACCAAAAACATTCAGACAAAATCGCCCCAGTTCTCATGTAGTACTAAGATCTTTTTTATTCTTCCCTTGCCCCAACCCAGCAAGGGTATTTAAGATTAATCAAATATGCCTACTACTACTTAAAAAAAAATAAGAGGTGCTTCCATTGTCTGTCAAAAAACCGCCCAAAAAAACCGAACGAGTGAGAAAAAACCGGACGAAAAAACCGTAACTATCCGATAAAAAAAGGCGAAAAGAAACAATCTGCGACAAAAAAACCGGAAAAAAACCAGACGAGTGAGAAAAAAACCGTAGTTGTCCGATAAAAAAAGGGGGCGAAAAAATAATCCGATTCCATGCAAAAAAAAAAAAGGCTGAAAAAATTCTCCGTGAAAAAGAAGAGCGACAAAAAAACGAAAAAAATAATCCGATTCCGTGCCAAAAAAAAGGGCGAAAAAAAATCTCTATCTCTACAACTTAAAAAAAAGATATGTTTCCTTCGTGCGTCAAAACAAAAAAAATTAGCGAAAAATTAAAAAAAATCCAACTCCTATCTGATTCCCTCTCAGAAACGAAAAAAAAAGTCCGACTATAGATCCGATCCCCCTGAAAAATAAAAGTCACCACTCCTTTTAAGTCCGAGATACCAGCCACCACTCCTCTCGGTTTCAATTTATACCGTGATATCTCTCACATCTTGGTGAAACAAAATGATGTGACGGATTGAAGATCTGTTTACAAAAACGGAATCTACAGGTCGAGAGCATTCCATTTTTATATTATTTTAATTTTTGGTTTGTACTTTTGCATTTGAGTCCCTATAATTTTTATATTTACATTTGAGTCCCTATAATCTTACAATAAGGTATTTGAGGTCGTTTTTGTTAAAAATAATAATAAAAGAGAGATAACAAAAGCAGAAAGTTGCATAAAAAGAAAAACAACAAAAGTTCTGTTTCCCATAAGTGGCGAAAAAAACCATAGATCCGAACGAAAAAAAAATCTGATTCCTATAAAAGGCAAAAAAAAAAAGTGGTGAAAAAACACTAGATTCGATTTCTTTAAAAAGGGAAAAAAAGTTTGATTCCTATAAAGGCGAAAAAACCGAAAAAACATCTGACAAGTCCGTTCGTTCGATCCCCTAAGAAAGTGGCAAAAAAAATAGTTCATAAAAAATAAAAAGTTGGTTCGTATAAAATAAAAAAATGCACACTAGAAATAAAATGGAAATGACGAAACAAAGTCCGATTTCTAATCAATATATATCTCTTCTCTATCTCTAATATAATCTAACTATTTAAAAAGAGAAAATGCACGAGAAAATAAAAACGGTTCAAAAACACGCGTGAGAAAAAAGTAAGAAAAAAGCGCAAAAAAATACGCTAAAAAGGTTTTCCATCTTCCATAAAAAATAAAAAAACACGCGAGAAAAATTATTTCCATCATTGGTAATTTTTTAAAAAAAACATGCGAGGAAAAAACTGTCAGAAAAACGCGACATTTCTAAAAAATGGTTTTAGAAAACCGCGCAAGAAAAAAAACAGCGTCTATTAAAAAAATCACTCTAAGAAAATTATCAGAAAAAACGTTAAATCGATGGACGCTTGAGTCGGATAGGATCCATCGATTTTTTTTTGCCACCTACTACATGGCTTTTATTCCGTAATATATTCTCATGTATTGGAAAAAAGCAAAAAAAAGAACATTTGAAGAAAAAACAAGCAAAAAACGCGCGAGAAAATAATTGTCAAAAAAAAGGCAAAAAACACACGAGAAAAGAAAATGAAAAAAAGGGAGAAAAATATGGTTTTTGTTGTAAATAAAAAGCAAAAAAATGCTAAAAAAACTTTTAGAAAGAAGTGCGTCATTTCTGAATGGTTTGAGAAAATCGCGCAAGAAAAAAACACCGTTTATAAAAGAACAAACCGCTCATTAAAATACAAACATTGTCATTGACATGATTATTAATGAAAAACTTATATTATCATTAGAATTTTTTCACCCATTGGAACGCACAAAAGGAACAGAAAAATCTTTTAAAAATCCTCTACAATGTACTACTTCAATCTATCCTAAAATATAAGTATTTTTGAATCTTGACATAGTCTTTGATATGCTACTTTAACTAATAATATCTATAAAAGTAAGATGATCTAAATAAAAAGACTTACATATTACGATAGTTTGTTTAATGATAAATCTAATAACATCAATTTTATATGATTTATCATTTTATTTTATTTTTGCTATTAATGGTCAAAATAGAAAATGTTTAACTTAGCACTATTATGAAAATGCTTATAATTTAGAATGGAGGAAATACTCCGTAGTACACTTTGTTCTTTTTTCTGAAAGAAACATGCGTGTGTTTTAAAAACAGCTTCGGTTTTATAGTAGCTACAAAGAATATTTCATCGCTTTCTGCCGGTCTTTTTTACATCTAAATGTGAAATTCCCTGCAAAGCAAGTACTACTACTCCACGCTTGTGTTTTTTTGTCTACTTTGCATTATAATCAAACAAAAACAAACGAGCCTCTTTTCGTTTTCGAAAAGAACAGATGAAACCAGTATAAAACAGCGAACTGCTTTGTCTTCTGTTGCAAACAGAGGATATGTCACTCACGTGAAGTGCAGAGGCCACGAAAAAAAGATGCTTGCACTGCGATCAACCTGCTACTAATACTTGTAATAAAAAAAATGCAACCCTAACGAGGAATTGTTAATTTCTGTGGGTAACCGGCAACCATGCTATTGTCGCCTCAACGTTCACAAAACAGTAACCTGATGCTTTTTCAGAACGGCTAGTATCAACCATGTAAAATTTCTCCACGTCAATGGAAATTTTGAGGCAGGAAGGAAGAAGCTTACCGGAAAGCGCAATCATGTCGGTCTGCGTTAGGCCATTGCTGGCGAACAAGGAGTTGAGCTGATCCAGATTGAAGCCAGGGCCGGGCAGGACGTGCTTGACAATGGCTCTGTTGAACGTCTTGCCGTCCAGCCGTCCGAGCTCCACGGAGTAGCTCGGCCCGCCGGTCTACAACAACACAAAGCAACATATCATGCAATGTCAGTAAGTGAACAAATTAGCGAATGCAACGCACTAACATCTCTGCTTCAACGGCAATCGTTACTTCATTATTAGCAGTTTCAGAATGCAGGTAGATATGCATGGCTTGTGATTATTCAGCAACCTTTTCTTGGCTCTCCGAGAGAACTGTTAATACAACGTCATGTCTAGATGTCTACCCGGTGGAAATTTTGTCTGCCTGCTTGCTGAGAACGAGGAAAATTTCCAGCCTTGCTCTGGCAGCGCCCACGAGCCCAGCCACGGGACTGTTTTTAGGCAAGGGTAATACGGCAAGCGTCACGGGCAACACGGACAGGAGCAGCGTACTACAGTTCAGGAGAAGTATTTACCCAGTTGGACCGAGGTTACAATTTAGAAACCACTCCTACGGGCTACGAGACGTCGCTTTCGCAGAAATCCATGCCGCAGAAAAAGCAATACTCGTTCAATAGAGTCATCGTACGCTCAAAGCAATACTGTGCAGGCAGTAGCCGCAGTACGCTCAAAGCTGTTGCCATCTCAAAAGATAGCGGATAGCCGGAGACACAGGAGGAGAATACCCGCCTCGTACGCTCGTATGCTCGGGCGCCCCGCGCCCCGCCACTACGCGATATCGCCTATCAAACCCGGCGAATGCGCCACAGTGCGCGAGCCAGCAAACCACGACCGTGCGCATGCGCAATCGCAAGCGCCGCGCGGCGGTTTCCTCGCGCGGAAGCCGAGGCCGACACGGCTCACATGTCTCCGTAAGCGACTTTCCCCTTTTCTTTCTTTTTTTCGTAGGAGGGGGCCAAACTGCGAAAGGCCAGCCAGCCAGAGCGACCGAACTAAACCGAACCCAGCACAGCGCCTGCGGCTACTGCCTGCAGCCACTGTGCGGGTCAGGCTGTGGAGACGTGGAGCACCGGAACCAACCGGGGAGACATGGACCATGCGTGGCTCGTGTCTGCGGTGTCTCATGGCCGGAGTCAGCCATGACTCATGGCCATGGGCTCACGGCTGGATAGATCGATCGATCGATGGTCCAGTTTGTCAAAAAAAAGGGGTTACTGGCGCGCTGGATGCAACAGTAGCTCCGTCGGCCCCACCTGTCATCGCACCGGCGTGGTGGGCCCCCGGCTGCCCTCTCTGCTTAAAAGCGTTAGCACTTGCAATTGCAACGTACTAGGAGTACTCCACACACAGGATGATGGGGAGTATGAACGCTAGTACTACTACGCCGATGCTTGAGCTTGCCAATCAGGGTGGGTCCGTGCTTGCTGGCGACTGACAAGGGCGTGCCCTACACTACAGTCGAGCCGGCGGTACACCGCATTGTAGTACTAGTATTGTTGAACGCACACTAGGACGTGACGAGTCGCGACAGGACGGGGATTTGTGTGTACAGTAGTGTTTATTGTTACCAGGGAGACGACGTCGCGGGCGGCCATGGCGAGGATGTCCGCGCAGGAGACCTTGCCGGCGCAGCCGGGGAGCGCCTCGACCGCCGCCTTGGCCTTGTTGATCGCCTCCACCGCGTCCGGCGACAGCGTGGCGTCCGCGCCGCTGTGGCTCTCGTCGTCGCCGTTCGGCGCCATCAGCATCACCGACGCGTCACACCCCTGCAAACGCAAACGCCGAGAAGATGAACACCCAAAACGCCGAGAGACCGAGACCGAGAGAGAGGACGTACCCTGACGAAGCAGTCGTGGAAGAAGAGGCGGAGGGTGCCGGGGCCGACGGCGAAGCTCTGCTGGAGGTGCTGCGAGATGACGGACCGGACGGTGGACTCCGCGTTGGGGCACGTGCTGCCGTAGTAGTTCTGCCGCAGCTGGGCCCTCGCGCCGCCGCCGACGCCCACAAGCGCCACGAATGCCACGAGCGCCGCCCGCGCGAGAAGCCCCATGCCGCCGCCGCCGTGCGCCGCCCTGGCCATCGCCGAACAAGCTCAGGCTCAGCTCGGCCCGGTGTGTGTGTGACAGCGACACAGTGTGTGGTCTGCTTTGAGGGTGGTGGTGGGACGCGGGAGC
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| CDS seq | ATGGCCAGGGCGGCGCACGGCGGCGGCGGCATGGGGCTTCTCGCGCGGGCGGCGCTCGTGGCATTCGTGGCGCTTGTGGGCGTCGGCGGCGGCGCGAGGGCCCAGCTGCGGCAGAACTACTACGGCAGCACGTGCCCCAACGCGGAGTCCACCGTCCGGTCCGTCATCTCGCAGCACCTCCAGCAGAGCTTCGCCGTCGGCCCCGGCACCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAGGACCGGCGGGCCGAGCTACTCCGTGGAGCTCGGACGGCTGGACGGCAAGACGTTCAACAGAGCCATTGTCAAGCACGTCCTGCCCGGCCCTGGCTTCAATCTGGATCAGCTCAACTCCTTGTTCGCCAGCAATGGCCTAACGCAGACCGACATGATTGCGCTTTCCGGTAAGCTTCTTCCTTCCTGCCTCAAAATTTCCATTGACCGGCTGGGGTACAACCCGCCGATGAACCTGGACTTCCTGCGGTCGATGCGGCGGGTGTGCCCGATCAACTACAGCCCGACGGCGTTCGCGATGCTGGACGTGTCGACGCCGCGGGCGTTCGACAACGCCTACTTCAACAACCTCCGCTACAACAAGGGCCTCCTCGCCTCCGACCAGATCCTCTTCACCGACCGCCGCTCCCGCCCCACCGTCAACCTCTTCGCCGCCAACTCCACCGCCTTCTTCGACGCCTTCGTCGCCGCCATGGCCAAGCTCGGCAGGATCGGCGTCAAGACCGGCTCCGACGGCGAGATCCGCCGCGTCTGCACCGCCGTCAACTAG
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| Protein seq | MARAAHGGGGMGLLARAALVAFVALVGVGGGARAQLRQNYYGSTCPNAESTVRSVISQHLQQSFAVGPGTLRLFFHDCFVRTGGPSYSVELGRLDGKTFNRAIVKHVLPGPGFNLDQLNSLFASNGLTQTDMIALSGKLLPSCLKISIDRLGYNPPMNLDFLRSMRRVCPINYSPTAFAMLDVSTPRAFDNAYFNNLRYNKGLLASDQILFTDRRSRPTVNLFAANSTAFFDAFVAAMAKLGRIGVKTGSDGEIRRVCTAVN |
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| Function | Peroxidase 45 [UniProtKB/Swiss-Prot:Q96522] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_04g0028470 | OsIR64_04g0028470.01 | Chr04 | 33219980 | 33225769 | - | NAM | ||
| CDS seq | ATGGCCAGGGCGGCGCACGGCGGCGGCGGCATGGGGCTTCTCGCGCGGGCGGCGCTCGTGGCATTCGTGGCGCTTGTGGGCGTCGGCGGCGGCGCGAGGGCCCAGCTGCGGCAGAACTACTACGGCAGCACGTGCCCCAACGCGGAGTCCACCGTCCGGTCCGTCATCTCGCAGCACCTCCAGCAGAGCTTCGCCGTCGGCCCCGGCACCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAGGACCGGCGGGCCGAGCTACTCCGTGGAGCTCGGACGGCTGGACGGCAAGACGTTCAACAGAGCCATTGTCAAGCACGTCCTGCCCGGCCCTGGCTTCAATCTGGATCAGCTCAACTCCTTGTTCGCCAGCAATGGCCTAACGCAGACCGACATGATTGCGCTTTCCGGTAAGCTTCTTCCTTCCTGCCTCAAAATTTCCATTGACCGGCTGGGGTACAACCCGCCGATGAACCTGGACTTCCTGCGGTCGATGCGGCGGGTGTGCCCGATCAACTACAGCCCGACGGCGTTCGCGATGCTGGACGTGTCGACGCCGCGGGCGTTCGACAACGCCTACTTCAACAACCTCCGCTACAACAAGGGCCTCCTCGCCTCCGACCAGATCCTCTTCACCGACCGCCGCTCCCGCCCCACCGTCAACCTCTTCGCCGCCAACTCCACCGCCTTCTTCGACGCCTTCGTCGCCGCCATGGCCAAGCTCGGCAGGATCGGCGTCAAGACCGGCTCCGACGGCGAGATCCGCCGCGTCTGCACCGCCGTCAACTAG
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| Protein seq | MARAAHGGGGMGLLARAALVAFVALVGVGGGARAQLRQNYYGSTCPNAESTVRSVISQHLQQSFAVGPGTLRLFFHDCFVRTGGPSYSVELGRLDGKTFNRAIVKHVLPGPGFNLDQLNSLFASNGLTQTDMIALSGKLLPSCLKISIDRLGYNPPMNLDFLRSMRRVCPINYSPTAFAMLDVSTPRAFDNAYFNNLRYNKGLLASDQILFTDRRSRPTVNLFAANSTAFFDAFVAAMAKLGRIGVKTGSDGEIRRVCTAVN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_04g0028470 | OsIR64_04g0028470.02 | Chr04 | 33219719 | 33225863 | - | IsoSeq | ||
| CDS seq | TCCCGCGTCCCACCACCACCCTCAAAGCAGACCACACACTGTGTCGCTGTCACACACACACCGGGCCGAGCTGAGCCTGAGCTTGTTCGGCGATGGCCAGGGCGGCGCACGGCGGCGGCGGCATGGGGCTTCTCGCGCGGGCGGCGCTCGTGGCATTCGTGGCGCTTGTGGGCGTCGGCGGCGGCGCGAGGGCCCAGCTGCGGCAGAACTACTACGGCAGCACGTGCCCCAACGCGGAGTCCACCGTCCGGTCCGTCATCTCGCAGCACCTCCAGCAGAGCTTCGCCGTCGGCCCCGGCACCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAGGGGGTGTGACGCGT
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| Protein seq | SRVPPPPSKQTTHCVAVTHTPGRAEPELVRRWPGRRTAAAAWGFSRGRRSWHSWRLWASAAARGPSCGRTTTAARAPTRSPPSGPSSRSTSSRASPSAPAPSASSSTTASSGGVTR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr04 | 33223821 | 33225527 | - | OsIR64_04g0028470.02 | OsIR64_04g0028470.02,OsIR64_04g0028470.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.779800 | 0.715434 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0656800 | RBH | 0.0 | 0.0 | 1.074620 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g56180 | RBH | 0.0 | 0.0 | 0.261138 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0656800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0029420 | RBH | 0.0 | 10.496535 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0030180 | RBH | 0.0 | 4.289734 | 1.392669 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0029750 | RBH | 0.0 | 21.269426 | 0.491899 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0029570 | RBH | 0.0 | 0.493146 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0029840 | RBH | 0.000000 | 32.070423 | 0.820840 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0527800 | RBH | 4.208537 | 5.993327 | 1.721227 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0532000 | RBH | 5.3475985 | 1.156531 | 25.2537545 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0028920 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0028760 | RBH | 0.0 | 11.711905 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0028870 | RBH | 0.0 | 36.486397 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0029450 | RBH | 0.0 | 0.519906 | 0.279294 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0029430 | RBH | 0.0 | 8.437228 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G028890 | RBH | 0.0 | 2.089716 | 1.078085 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0028670 | RBH | 0.0 | 4.845629 | 0.932180 |
