Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_04g0025350 | OGI:04091430 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr04:30702028-30708972 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GCGCGAAGAGAAAAAAGGGGGAAAAAAAACCAAAACCCTAGCGATCGCTTCCCCCGATCCATGGCGCCGCCGCCGGGGATCCTCGAGGTGCGGTGCGCCGGGTGCGGCGAGACCCTGGAGGTGGAGCACGGCCTGACGGAGTTCGCCTGCCCCGACTGCGGCATGGCCCAGGCGCTCCCGCCGGAGCTCATGCCGCCGCGCCCCCGCCGCGCGCTCCCGCTCCCCGGGCGCGCGAGCGTCGTCCCCTCCGCCGTGCCCGCCCCCGCCACCGCCACCGCCGCCGCCCCTCCCACGCGCGTCTCGTGCGGGGGATGCGCGGCCGTCCTCAGCGTGCCGCACGGCCCGGGGCGGTTTTCGTGCCCGCTCTGCGGCGCCGAGATCGCGCCTCCCCCTCCCCTCGCGGCCGTCGTCTCAGTCGTTGCCCCGCCGGCAGCGATCCCGATTACCTCCAATCGGCCGGCGATGACCTCCGAGGTACTATCCAGAATCATTTCCTCCCAGGATTTCCCTCGCAATGCATCGTTGATTATTGGTTTCATTAAGTGTTTATTTATACTAGCTCAAATGTGAGCAATGTGGTGATGGTATCTGTTGGCCTTTTGCTACAAACTTGTGACATGTGAGGTGAAACTACTTTCTATAGGTTGCTAGTAGCATAACCATGCTTGTATTGTACATTGAGGACTATGTCCTGTGTACTAAGCAGTGAGATTAAATTTGATTAGGAATTCTGAATAAGCATGCGTGACTTTACTATCAGATCACTTGGTTTTAGCAAGGAGTCGCTATTGTAGCATTCCTGTTTTAATCTCAACAACCCGCATTTTCTCATGTTTGGCTAAAAACGCTAGGGATCAGCATGGCCAATATATGGGTACCCCTTGACCAGTTATAGTTCAACTAAATATATTGCATGTATTAGAAAGCTGTATTTTAGTTGACCTAAAGTAGCTCAATGAGTACCCCCATGGATGATCCATGCTCATCCCTAAAGAATAACAAGTTTAAAAGTTACCAGCATAAATGGTCATTTCTCATTTCGTTCGAACTGAATGTGTGCATTTAAAGAAAGAGTTTACCTATGCGCAATCATGATTGGTGCAATTAACCAGCATTGTTTTTTCAAGTATCCACGAATTGGAAAAAAGTGATGTATTTGATTCAGTCAACTTTGGAGAAAAGTTTAAACACTTCAACATTTGAATAACAACATCCCTTTGCCCCTTTGACCTTTCTATTACTTCCAAAGCACCTGTGGTACCACTAGTTTAATGATCAACCATCTATAAATAAATAAGTAAAGATTGCAGCCACTATATTCTCTAACTGTCTTGAGCTAGAAATTAGCATGTTTGTTGGATCTGCACAGTTGATTGTGGTGCATCGAAATTATAACTATGGAAATTGATCAAATATATATTAGAGCTGTTACAAGTCATGTAAGAAATACAATTATATTGGAAGTTTGGAACAAACATGTGGTATCATTGATCAAAGTTGACAGAATTGGCTGCACTTCCCATGGTGACACTTTATTTAGACCAATAGTAGTATTTCATCACAGTGTTTCATGGTGTTTTTCTTCTTTCAGGTGCTGAATGGAAATTCAAATCAGCCAACTCTTGCTGGACAGGTTCAGAAGTCCATTATTCCAGAGCAATACTACAAGCATTCTTTTAGAGAGGAGTCATTCAGTTCATTCAGAGTTGACTCTAGGACACAAATTCCTGATGTAGGGAGGTTACAAAACGAGTGTGTTAATCCTTCAGCTGATCGAGAGGAGTCACGCACAGAACCACCTAACGGGACTATGACCAAGCCTGGCAAGAAGAAAACTACATCTGCTTCTGGTCCAAAATCTCATCCAGCTGGAAAGTTGCAGGAAGAGCATATTAGTAAGGCCATCCATGCATCAAGGGCTCAGGGAATGCCTTCAAACTCTGTAGGAGGAGGATTTCACAATGGCATGATTGCAGTGCACAACAAGCAGAAAACTGGGCATATAGCTGCCCCTAGTGCTATCGAGCATGAGCAGATAAACACTCTCCATCAAGTTTGTGACAAGCAGCAGCCTGGCGAAAATTCCAGTGATTTGGTTCATGTGGAGCAGGTACAGGTGGCATGCAAAGCAGTACAAAACAATAAAAAAGGTACCAAGTATACAAAAGGAAATCAAAAGAGGCAAGGTAAGAGTCCGTTGAATTATTCAACTGAGTTGCCTCATCTTAGGCGTAGTCAGCGCTTAACAAAGGGTTCGCCAGACCCTATTGATATTGAGCCTATCCATAGGATAGATGCTTCCCCAAACCAAAATCAATCAGAAACTCCACCAATTGAGAGGGCGATAGATGATACTTACCATATTTCACCAAACCAGCACCGGTATCCTCAATCAGTCTCTAATAAGTTGGACAATGCTGATGCAACTACTCCTGCTTTGAATCATAGTATGCAACAAAAGGAGAGAATTCCCCAGTGCTACAGCCAGATGTACTCTCCAGAAAGTAGGTGGGTACTTCCAAATCGTAGTTCTAATTCATGTCATGAGCATGAGATGCCTAATGAAAGCTTTGATGGGATTGTCCAACTCGATAGTAGTGATGATGAAGTGCATTCAATTCCATTAGAGAACCAAAATCAGGATATGGATGGCCAACTAGAACAACAAGCTTGTGCTGGCAAGAACCTTTCAGAGCATGGCAGGCAAAAGAATGGCTTCATTGGTTCTTCAGGTGATGCCAAACATCATGGGGGCTTGTCCTCTGGAATGGGAACACGCCACCAGATGAATTTGGCTGCTTCATGCAGCCGCCTTGCTGTTTTATTGCCAGTTGCGGATGCTACTCCATTGCCCACCATCAGCTCACCTTCTTCATTTGAAAGTCTGTCTGTCCCACTCTCCGGCATGCTCAATTGTTTCTGTTGAGTCCTTTCTAACATGTTCTTCCGCACCTGTGCAGAGCTACCAGTTAACTGTAGCAGTCCAACAACACCGCACCAGCACCACCAACCATCCCCCATCTATTCTCAGGTTCCTCCCTTTATCTATTCTTGCTGAACCTTTTTATTTTTCTTTGGGTGATGCTGAACTTTATTTTCAGTTTGAGGTCTGAACGCCAGTGTGCTTGAAAAGTGGAAAGAGCAGACAACCTAGTTTCTTATAGAAGTTTTGGCATGGTTTGATGAAATAGGGTTTGCGTTTTAGCATTTGAAATTGATGCATCTTAATAAATGTACATGCAGGTTTACAAACTTGTGATGCTGACTTGAAAACTTGCTTGCTGGTTTAAAATTGTTGATAGATATTACGTGTTCAGTTCCACTATTATTCCATGATATATCTCAAATGTTGTAGTGCTATGATTATAATTGAATTGCAAGCAGAAAGCTTTCTATTGTATTCAAATGGAATTCTTTTGCAATGACCTAAGGATGTAACATTTGCACGTTTCATGTGCATCCTTATTTTCCCTGTCAAATTCACTTTATACCTTATTTACCCATGATGAGCACTGACATATCCTGGATCCACACGTCATTGAGGGAATAAGGGGCAAATGAGAGATTGTGCCAACTTTCAGGGGCAAATAAGGATTTTATCCCATGATTTGTGTATTGTCTGACACCGAGCAATTTCAGGATGCCCGGAATGGTGATATGCTGTCAGCATCTGTTAGTAAATCATCAAAAAAGCGCAGGGGCCGTGCCCCTGCGGTACTAATGGAACCACGCAAAGAAGCTGACAGGCCTGTGCTGACACCTTGTGGTGCAGAGTAAGTGTTGGTGATGTGTATAGATTTATGGAAGGTTAAATAACTTGCACATTCTAATCTTCATGTGTATGAAAAATTGATTTATGCAACTAGAAACTGGACTGTGCATCCATCCTGTTTGAAGGTGACAACCACCCTATCCCTTCTTATCAAGCAGAACTATCCTGGAACCTATGTTTCAGTGGGTACCAATGGCCAACCCTGTGAGCTTGCGGTTTTCCATTGGCACCAATGTCCTTCAGATATAAGAGATACTGTATTGGATGAATTCCTTGTGAGTAACTTACGGGGGCATGTTTCATACTATTTTCATTGAGATTTAAAAGTATGTGTGCTTATTATTTAAAATAATGCAGAAACGCTACAAGTGGTCCCCTGGCCAGGAAGAGGAGTGTCGAAAGATCTTTGACCGTAAAGCAGTTAGACAATTAGTTAACCTCTTTTGCTACGAGAAGCAAAGGGTCAGAGATTTGCTGGCAAAAAAAGCCAAAAGATCTTCGACGGTTGTTAGGGCCAGTAGGTCGTTAGAAGAGGGCGATGGTAGGGAAGATTCAGAGGAGCAGCATGGAGATGAGTCTGTTCTGGTGCTTGAGCTTGATGATCCGCTTAACTGGAAACCATTCGTCCCTGAATGGATGCAACCAAAATGGTGGGAGAAGTTGTGTGACCATTGGGCGAAAGATGAAGTTATGAAGGTCTCTTACCAAAAAAGGAAGAACCGGAATGCAGGAAACCCCCCCTGTAATGCTTCAGGCTCACAGAGCATAGCAATGCATCAGCAGTTTACGGTAAGAACTAGGAATGCAAATCCTACTTGTTGACATCTTTCTGCATTAGTTAACGAGCCAGGTGTGATTTTGTAGAGCATTGACAATGGCAGAAAGCTGGTATCTGATATTGATCCATCCACCAAGATTAACAGTGATAAAGGAGGGATTATTGACAAGAAGATATTGCGAACTGAGGTACCTACTCCTGTTACATGTACAATATTTGAAAATTTTGAATCTGTGAATAGTATCACTTTGCACATGTCAACTTGTACTATACTCTTTTTTTCCAGGATACCACGTATGAACATACTGCAGAGGCCAGAGAGCCTGTACAGGAACATATGGGAGGCTGCAAGCGTGGGAGATACTATTGCGACACTGGTGTTAGGAAGAAGGTCCAGACTGATTCTTTGCCAAAGTCCTCCCCTGGTTGTTCCAGCAATCACGGACAAGGACAACCTCCGATGTTCACACATGAACAGGTGCAACAGATGATTAATCAAGCTCTACAAGGGTTAAATGAGACATGGGAGAAGAAGTTTTTGTCTTTGGAGCAAAACATGCGGAGCATGTCAAAATCACGCATTATTCTGGATGTAAGTAAAAGGCAGTTATATAACTCATTTAATTAGCATTCATATTATTTTTATTTATGTAATCCATTTGCAGGGTCCGAAAAAGGGGTCATTGGCGGCTGTTGCAGGGGATAAGCGATGCCAGCTGTCATGCCAGGTAATAATGAAATTTGTATTCTGCCTGTACATGTACCTTTAAAGCAGAGTTCAGTATTTGCTAGAGAGATGCTATAGTGAAAGCCTGTTTCTGTTTGTCTTAGTGGGCTTAAAAGTAAGTCCATTGAAAAAGGAGTGGCACTAAATTTAAGCTACCATGGTCTCTTGTTGATAACCAGATGCTAATTGATAAGTTTGTGCGAACAATTTAAACAAAACGAAATGATAGGCAATGTATAAATAATAAAAAAAACTGTTCTAAAAATGATTAACTGCTTACAATGACTGCACGAGACTACGAGTTAGACTACCCAGCTGGTCTGGCTTATACTGAAACTCGACACTGACCAAAATCAATTCAACCAGATGTATTTTTCTTGATCTCCCTTGCATGCTAACCTATTAAACTTGTCCATGGAAAATTCTTTTGACTGGGTGGTTTAGTGTGATAAACTCTAGTGCGTTGATATGGATTGTTTTGCTTTATGATCATGTACAAATCATGGCAGAGCCTCTTGTATCTAGTAATTATTATGGGCCAAAGCATAGGCTAGATGAAAACATTGGTGATTCGGTGGTGTGTGAAACCTTCGATGGACCGGAGGTGGTTGGTCCTTGCTAGGGGAATAGATACTTGGGTTGACACCAAGAGAGATCCAATATTGCAAAAAAAAAAAAAATTTCTAACATAGCTGCTCTATTGCGTCCATAGATGTTAGTGGACATATAAATATGCCTGCTAGTATGTTAAGCATGCTCCATTTGGAGGTAGTAACTGGTAAGGTCTCAGCTTTTGTATTCAAATTTGGAACCTAACTTGCATAATTTCTTGAAGCATCAATCGACGATATATGCCAATCGCTGAATTCGCCAATGTAGCTATCCGGCCTTTCTTAGCTGGAGCACAAAACCTAACCCCAGTTCACTCCTGACGCTTTGCAGGACACATTAGATTCCGTGGACGGTGAAAAGGATCCAGCGGGGGAAGGCGAGGACGACCCCGAGAACCAGGATTATGATGACGATGAGCATTGGAGCTGAGCCAAAACGTGAGCTTGTGGTGGCACCAGATTTTCGTCTCCTCGGAGCACTTCCCGGTTGCCAGCGTGTAAATCATGTACAGATTTCCAGCATCTGAAAGCGGTTGTCTCGATCGCTTGCTGGTCGCTTCCCCATACGGCTTCGGAGTTCAGACTTTTTCTCACCGTCGTGCGTCGCCGTGGGAGGCAGGCGCGTGGTACGAAAGAAAGATACCCCCCGTTGCGCTGCGCATCCTCGCTTTCCTGCCGGCCACGCTGCGTCACGCGGAAGCTGTCGCGCGCGGCGCGGGGCAACGCGACGCGCGACTCGCACGCCACCGGCGCGCGCGTGCCCACGCGTTGGCACCCCCCGTGAGCAACGTGACGCTACCACCGCCTGCCTGTCTGCTTCGCCCGCCGCGGCTTCCTCCCCTCTGCACGCGGTGCGGTGCCGTTGCCTGTTTTTTTTTAGTACTCCAACTCTAGCTTTTCGGCGTGAATTATAGTAGTAGTAGTATTTTGAATAGGGGTACGTATATATTCTTCTGCGTATATTCTTGTGCGTAGGTAGGAAACGGAGTGCTGAGCACCAGCTGTACGCTGAGCTCGTCAACCAATTGTCAATCTTTACGAATGGAGTATTTTGCCT
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| CDS seq | ATGGCGCCGCCGCCGGGGATCCTCGAGGTGCGGTGCGCCGGGTGCGGCGAGACCCTGGAGGTGGAGCACGGCCTGACGGAGTTCGCCTGCCCCGACTGCGGCATGGCCCAGGCGCTCCCGCCGGAGCTCATGCCGCCGCGCCCCCGCCGCGCGCTCCCGCTCCCCGGGCGCGCGAGCGTCGTCCCCTCCGCCGTGCCCGCCCCCGCCACCGCCACCGCCGCCGCCCCTCCCACGCGCGTCTCGTGCGGGGGATGCGCGGCCGTCCTCAGCGTGCCGCACGGCCCGGGGCGGTTTTCGTGCCCGCTCTGCGGCGCCGAGATCGCGCCTCCCCCTCCCCTCGCGGCCGTCGTCTCAGTCGTTGCCCCGCCGGCAGCGATCCCGATTACCTCCAATCGGCCGGCGATGACCTCCGAGGTGCTGAATGGAAATTCAAATCAGCCAACTCTTGCTGGACAGGTTCAGAAGTCCATTATTCCAGAGCAATACTACAAGCATTCTTTTAGAGAGGAGTCATTCAGTTCATTCAGAGTTGACTCTAGGACACAAATTCCTGATGTAGGGAGGTTACAAAACGAGTGTGTTAATCCTTCAGCTGATCGAGAGGAGTCACGCACAGAACCACCTAACGGGACTATGACCAAGCCTGGCAAGAAGAAAACTACATCTGCTTCTGGTCCAAAATCTCATCCAGCTGGAAAGTTGCAGGAAGAGCATATTAGTAAGGCCATCCATGCATCAAGGGCTCAGGGAATGCCTTCAAACTCTGTAGGAGGAGGATTTCACAATGGCATGATTGCAGTGCACAACAAGCAGAAAACTGGGCATATAGCTGCCCCTAGTGCTATCGAGCATGAGCAGATAAACACTCTCCATCAAGTTTGTGACAAGCAGCAGCCTGGCGAAAATTCCAGTGATTTGGTTCATGTGGAGCAGGTACAGGTGGCATGCAAAGCAGTACAAAACAATAAAAAAGGTACCAAGTATACAAAAGGAAATCAAAAGAGGCAAGGTAAGAGTCCGTTGAATTATTCAACTGAGTTGCCTCATCTTAGGCGTAGTCAGCGCTTAACAAAGGGTTCGCCAGACCCTATTGATATTGAGCCTATCCATAGGATAGATGCTTCCCCAAACCAAAATCAATCAGAAACTCCACCAATTGAGAGGGCGATAGATGATACTTACCATATTTCACCAAACCAGCACCGGTATCCTCAATCAGTCTCTAATAAGTTGGACAATGCTGATGCAACTACTCCTGCTTTGAATCATAGTATGCAACAAAAGGAGAGAATTCCCCAGTGCTACAGCCAGATGTACTCTCCAGAAAGTAGGTGGGTACTTCCAAATCGTAGTTCTAATTCATGTCATGAGCATGAGATGCCTAATGAAAGCTTTGATGGGATTGTCCAACTCGATAGTAGTGATGATGAAGTGCATTCAATTCCATTAGAGAACCAAAATCAGGATATGGATGGCCAACTAGAACAACAAGCTTGTGCTGGCAAGAACCTTTCAGAGCATGGCAGGCAAAAGAATGGCTTCATTGGTTCTTCAGGTGATGCCAAACATCATGGGGGCTTGTCCTCTGGAATGGGAACACGCCACCAGATGAATTTGGCTGCTTCATGCAGCCGCCTTGCTGTTTTATTGCCAGTTGCGGATGCTACTCCATTGCCCACCATCAGCTCACCTTCTTCATTTGAAAAGCTACCAGTTAACTGTAGCAGTCCAACAACACCGCACCAGCACCACCAACCATCCCCCATCTATTCTCAGCGCAGGGGCCGTGCCCCTGCGGTACTAATGGAACCACGCAAAGAAGCTGACAGGCCTGTGCTGACACCTTGTGGTGCAGAAAACTGGACTGTGCATCCATCCTGTTTGAAGGTGACAACCACCCTATCCCTTCTTATCAAGCAGAACTATCCTGGAACCTATGTTTCAGTGGGTACCAATGGCCAACCCTGTGAGCTTGCGGTTTTCCATTGGCACCAATGTCCTTCAGATATAAGAGATACTGTATTGGATGAATTCCTTAAACGCTACAAGTGGTCCCCTGGCCAGGAAGAGGAGTGTCGAAAGATCTTTGACCGTAAAGCAGTTAGACAATTAGTTAACCTCTTTTGCTACGAGAAGCAAAGGGTCAGAGATTTGCTGGCAAAAAAAGCCAAAAGATCTTCGACGGTTGTTAGGGCCAGTAGGTCGTTAGAAGAGGGCGATGGTAGGGAAGATTCAGAGGAGCAGCATGGAGATGAGTCTGTTCTGGTGCTTGAGCTTGATGATCCGCTTAACTGGAAACCATTCGTCCCTGAATGGATGCAACCAAAATGGTGGGAGAAGTTGTGTGACCATTGGGCGAAAGATGAAGTTATGAAGGTCTCTTACCAAAAAAGGAAGAACCGGAATGCAGGAAACCCCCCCTGTAATGCTTCAGGCTCACAGAGCATAGCAATGCATCAGCAGTTTACGAGCATTGACAATGGCAGAAAGCTGGTATCTGATATTGATCCATCCACCAAGATTAACAGTGATAAAGGAGGGATTATTGACAAGAAGATATTGCGAACTGAGGATACCACGTATGAACATACTGCAGAGGCCAGAGAGCCTGTACAGGAACATATGGGAGGCTGCAAGCGTGGGAGATACTATTGCGACACTGGTGTTAGGAAGAAGGTCCAGACTGATTCTTTGCCAAAGTCCTCCCCTGGTTGTTCCAGCAATCACGGACAAGGACAACCTCCGATGTTCACACATGAACAGGTGCAACAGATGATTAATCAAGCTCTACAAGGGTTAAATGAGACATGGGAGAAGAAGTTTTTGTCTTTGGAGCAAAACATGCGGAGCATGTCAAAATCACGCATTATTCTGGATGGTCCGAAAAAGGGGTCATTGGCGGCTGTTGCAGGGGATAAGCGATGCCAGCTGTCATGCCAGGACACATTAGATTCCGTGGACGGTGAAAAGGATCCAGCGGGGGAAGGCGAGGACGACCCCGAGAACCAGGATTATGATGACGATGAGCATTGGAGCTGA
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| Protein seq | MAPPPGILEVRCAGCGETLEVEHGLTEFACPDCGMAQALPPELMPPRPRRALPLPGRASVVPSAVPAPATATAAAPPTRVSCGGCAAVLSVPHGPGRFSCPLCGAEIAPPPPLAAVVSVVAPPAAIPITSNRPAMTSEVLNGNSNQPTLAGQVQKSIIPEQYYKHSFREESFSSFRVDSRTQIPDVGRLQNECVNPSADREESRTEPPNGTMTKPGKKKTTSASGPKSHPAGKLQEEHISKAIHASRAQGMPSNSVGGGFHNGMIAVHNKQKTGHIAAPSAIEHEQINTLHQVCDKQQPGENSSDLVHVEQVQVACKAVQNNKKGTKYTKGNQKRQGKSPLNYSTELPHLRRSQRLTKGSPDPIDIEPIHRIDASPNQNQSETPPIERAIDDTYHISPNQHRYPQSVSNKLDNADATTPALNHSMQQKERIPQCYSQMYSPESRWVLPNRSSNSCHEHEMPNESFDGIVQLDSSDDEVHSIPLENQNQDMDGQLEQQACAGKNLSEHGRQKNGFIGSSGDAKHHGGLSSGMGTRHQMNLAASCSRLAVLLPVADATPLPTISSPSSFEKLPVNCSSPTTPHQHHQPSPIYSQRRGRAPAVLMEPRKEADRPVLTPCGAENWTVHPSCLKVTTTLSLLIKQNYPGTYVSVGTNGQPCELAVFHWHQCPSDIRDTVLDEFLKRYKWSPGQEEECRKIFDRKAVRQLVNLFCYEKQRVRDLLAKKAKRSSTVVRASRSLEEGDGREDSEEQHGDESVLVLELDDPLNWKPFVPEWMQPKWWEKLCDHWAKDEVMKVSYQKRKNRNAGNPPCNASGSQSIAMHQQFTSIDNGRKLVSDIDPSTKINSDKGGIIDKKILRTEDTTYEHTAEAREPVQEHMGGCKRGRYYCDTGVRKKVQTDSLPKSSPGCSSNHGQGQPPMFTHEQVQQMINQALQGLNETWEKKFLSLEQNMRSMSKSRIILDGPKKGSLAAVAGDKRCQLSCQDTLDSVDGEKDPAGEGEDDPENQDYDDDEHWS |
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| Function | Protein FORGETTER 1 [UniProtKB/Swiss-Prot:F4IF36] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_04g0025350 | OsIR64_04g0025350.01 | Chr04 | 30702028 | 30708972 | + | NAM | ||
| CDS seq | ATGGCGCCGCCGCCGGGGATCCTCGAGGTGCGGTGCGCCGGGTGCGGCGAGACCCTGGAGGTGGAGCACGGCCTGACGGAGTTCGCCTGCCCCGACTGCGGCATGGCCCAGGCGCTCCCGCCGGAGCTCATGCCGCCGCGCCCCCGCCGCGCGCTCCCGCTCCCCGGGCGCGCGAGCGTCGTCCCCTCCGCCGTGCCCGCCCCCGCCACCGCCACCGCCGCCGCCCCTCCCACGCGCGTCTCGTGCGGGGGATGCGCGGCCGTCCTCAGCGTGCCGCACGGCCCGGGGCGGTTTTCGTGCCCGCTCTGCGGCGCCGAGATCGCGCCTCCCCCTCCCCTCGCGGCCGTCGTCTCAGTCGTTGCCCCGCCGGCAGCGATCCCGATTACCTCCAATCGGCCGGCGATGACCTCCGAGGTGCTGAATGGAAATTCAAATCAGCCAACTCTTGCTGGACAGGTTCAGAAGTCCATTATTCCAGAGCAATACTACAAGCATTCTTTTAGAGAGGAGTCATTCAGTTCATTCAGAGTTGACTCTAGGACACAAATTCCTGATGTAGGGAGGTTACAAAACGAGTGTGTTAATCCTTCAGCTGATCGAGAGGAGTCACGCACAGAACCACCTAACGGGACTATGACCAAGCCTGGCAAGAAGAAAACTACATCTGCTTCTGGTCCAAAATCTCATCCAGCTGGAAAGTTGCAGGAAGAGCATATTAGTAAGGCCATCCATGCATCAAGGGCTCAGGGAATGCCTTCAAACTCTGTAGGAGGAGGATTTCACAATGGCATGATTGCAGTGCACAACAAGCAGAAAACTGGGCATATAGCTGCCCCTAGTGCTATCGAGCATGAGCAGATAAACACTCTCCATCAAGTTTGTGACAAGCAGCAGCCTGGCGAAAATTCCAGTGATTTGGTTCATGTGGAGCAGGTACAGGTGGCATGCAAAGCAGTACAAAACAATAAAAAAGGTACCAAGTATACAAAAGGAAATCAAAAGAGGCAAGGTAAGAGTCCGTTGAATTATTCAACTGAGTTGCCTCATCTTAGGCGTAGTCAGCGCTTAACAAAGGGTTCGCCAGACCCTATTGATATTGAGCCTATCCATAGGATAGATGCTTCCCCAAACCAAAATCAATCAGAAACTCCACCAATTGAGAGGGCGATAGATGATACTTACCATATTTCACCAAACCAGCACCGGTATCCTCAATCAGTCTCTAATAAGTTGGACAATGCTGATGCAACTACTCCTGCTTTGAATCATAGTATGCAACAAAAGGAGAGAATTCCCCAGTGCTACAGCCAGATGTACTCTCCAGAAAGTAGGTGGGTACTTCCAAATCGTAGTTCTAATTCATGTCATGAGCATGAGATGCCTAATGAAAGCTTTGATGGGATTGTCCAACTCGATAGTAGTGATGATGAAGTGCATTCAATTCCATTAGAGAACCAAAATCAGGATATGGATGGCCAACTAGAACAACAAGCTTGTGCTGGCAAGAACCTTTCAGAGCATGGCAGGCAAAAGAATGGCTTCATTGGTTCTTCAGGTGATGCCAAACATCATGGGGGCTTGTCCTCTGGAATGGGAACACGCCACCAGATGAATTTGGCTGCTTCATGCAGCCGCCTTGCTGTTTTATTGCCAGTTGCGGATGCTACTCCATTGCCCACCATCAGCTCACCTTCTTCATTTGAAAAGCTACCAGTTAACTGTAGCAGTCCAACAACACCGCACCAGCACCACCAACCATCCCCCATCTATTCTCAGCGCAGGGGCCGTGCCCCTGCGGTACTAATGGAACCACGCAAAGAAGCTGACAGGCCTGTGCTGACACCTTGTGGTGCAGAAAACTGGACTGTGCATCCATCCTGTTTGAAGGTGACAACCACCCTATCCCTTCTTATCAAGCAGAACTATCCTGGAACCTATGTTTCAGTGGGTACCAATGGCCAACCCTGTGAGCTTGCGGTTTTCCATTGGCACCAATGTCCTTCAGATATAAGAGATACTGTATTGGATGAATTCCTTAAACGCTACAAGTGGTCCCCTGGCCAGGAAGAGGAGTGTCGAAAGATCTTTGACCGTAAAGCAGTTAGACAATTAGTTAACCTCTTTTGCTACGAGAAGCAAAGGGTCAGAGATTTGCTGGCAAAAAAAGCCAAAAGATCTTCGACGGTTGTTAGGGCCAGTAGGTCGTTAGAAGAGGGCGATGGTAGGGAAGATTCAGAGGAGCAGCATGGAGATGAGTCTGTTCTGGTGCTTGAGCTTGATGATCCGCTTAACTGGAAACCATTCGTCCCTGAATGGATGCAACCAAAATGGTGGGAGAAGTTGTGTGACCATTGGGCGAAAGATGAAGTTATGAAGGTCTCTTACCAAAAAAGGAAGAACCGGAATGCAGGAAACCCCCCCTGTAATGCTTCAGGCTCACAGAGCATAGCAATGCATCAGCAGTTTACGAGCATTGACAATGGCAGAAAGCTGGTATCTGATATTGATCCATCCACCAAGATTAACAGTGATAAAGGAGGGATTATTGACAAGAAGATATTGCGAACTGAGGATACCACGTATGAACATACTGCAGAGGCCAGAGAGCCTGTACAGGAACATATGGGAGGCTGCAAGCGTGGGAGATACTATTGCGACACTGGTGTTAGGAAGAAGGTCCAGACTGATTCTTTGCCAAAGTCCTCCCCTGGTTGTTCCAGCAATCACGGACAAGGACAACCTCCGATGTTCACACATGAACAGGTGCAACAGATGATTAATCAAGCTCTACAAGGGTTAAATGAGACATGGGAGAAGAAGTTTTTGTCTTTGGAGCAAAACATGCGGAGCATGTCAAAATCACGCATTATTCTGGATGGTCCGAAAAAGGGGTCATTGGCGGCTGTTGCAGGGGATAAGCGATGCCAGCTGTCATGCCAGGACACATTAGATTCCGTGGACGGTGAAAAGGATCCAGCGGGGGAAGGCGAGGACGACCCCGAGAACCAGGATTATGATGACGATGAGCATTGGAGCTGA
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| Protein seq | MAPPPGILEVRCAGCGETLEVEHGLTEFACPDCGMAQALPPELMPPRPRRALPLPGRASVVPSAVPAPATATAAAPPTRVSCGGCAAVLSVPHGPGRFSCPLCGAEIAPPPPLAAVVSVVAPPAAIPITSNRPAMTSEVLNGNSNQPTLAGQVQKSIIPEQYYKHSFREESFSSFRVDSRTQIPDVGRLQNECVNPSADREESRTEPPNGTMTKPGKKKTTSASGPKSHPAGKLQEEHISKAIHASRAQGMPSNSVGGGFHNGMIAVHNKQKTGHIAAPSAIEHEQINTLHQVCDKQQPGENSSDLVHVEQVQVACKAVQNNKKGTKYTKGNQKRQGKSPLNYSTELPHLRRSQRLTKGSPDPIDIEPIHRIDASPNQNQSETPPIERAIDDTYHISPNQHRYPQSVSNKLDNADATTPALNHSMQQKERIPQCYSQMYSPESRWVLPNRSSNSCHEHEMPNESFDGIVQLDSSDDEVHSIPLENQNQDMDGQLEQQACAGKNLSEHGRQKNGFIGSSGDAKHHGGLSSGMGTRHQMNLAASCSRLAVLLPVADATPLPTISSPSSFEKLPVNCSSPTTPHQHHQPSPIYSQRRGRAPAVLMEPRKEADRPVLTPCGAENWTVHPSCLKVTTTLSLLIKQNYPGTYVSVGTNGQPCELAVFHWHQCPSDIRDTVLDEFLKRYKWSPGQEEECRKIFDRKAVRQLVNLFCYEKQRVRDLLAKKAKRSSTVVRASRSLEEGDGREDSEEQHGDESVLVLELDDPLNWKPFVPEWMQPKWWEKLCDHWAKDEVMKVSYQKRKNRNAGNPPCNASGSQSIAMHQQFTSIDNGRKLVSDIDPSTKINSDKGGIIDKKILRTEDTTYEHTAEAREPVQEHMGGCKRGRYYCDTGVRKKVQTDSLPKSSPGCSSNHGQGQPPMFTHEQVQQMINQALQGLNETWEKKFLSLEQNMRSMSKSRIILDGPKKGSLAAVAGDKRCQLSCQDTLDSVDGEKDPAGEGEDDPENQDYDDDEHWS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_04g0025350 | OsIR64_04g0025350.02 | Chr04 | 30702031 | 30708479 | + | IsoSeq | ||
| CDS seq | ATGGCAGAAAGCTGGTATCTGATATTGATCCATCCACCAAGATTAACAGTGATAAAGGAGGGATTATTGACAAGAAGATATTGCGAACTGAGGATACCACGTATGAACATACTGCAGAGGCCAGAGAGCCTGTACAGGAACATATGGGAGGCTGCAAGCGTGGGAGATACTATTGCGACACTGGTGTTAGGAAGAAGGTCCAGACTGATTCTTTGCCAAAGTCCTCCCCTGGTTGTTCCAGCAATCACGGACAAGGACAACCTCCGATGTTCACACATGAACAGGTGCAAC
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| Protein seq | MAESWYLILIHPPRLTVIKEGLLTRRYCELRIPRMNILQRPESLYRNIWEAASVGDTIATLVLGRRSRLILCQSPPLVVPAITDKDNLRCSHMNRCN |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr04 | 30705058 | 30705721 | + | OsIR64_04g0025350.02 | OsIR64_04g0025350.02,OsIR64_04g0025350.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.022434 | 0.276175 | 1.193453 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0610200 | RBH | 0.796844 | 0.453219 | 1.797455 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g52074 | RBH | 0.541042 | 0.304274 | 0.461860 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0610200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0026080 | RBH | 0.501095 | 2.234650 | 4.888320 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0026870 | RBH | 0.146918 | 1.602131 | 2.509502 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0026630 | RBH | 0.623517 | 1.309344 | 5.861969 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0026310 | RBH | 0.064772 | 0.053575 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0026580 | RBH | 1.336522 | 4.181768 | 15.181063 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0487300 | RBH | 2.5131665 | 10.555694 | 10.2626925 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0025340 | RBH | 0.171509 | 0.308011 | 0.634616 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0490800 | RBH | 2.396024 | 10.2306285 | 11.179537 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0025830 | RBH | 0.099330 | 0.115153 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0025650 | RBH | 0.110445 | 0.895018 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0025700 | RBH | 2.682163 | 3.766866 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0026130 | RBH | 0.437343 | 0.131279 | 0.909018 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0026290 | RBH | 0.044636 | 0.839894 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G025550 | RBH | 0.094748 | 0.794221 | 1.969564 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0025440 | RBH | 1.294085 | 3.559618 | 4.169181 |
