Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_03g0036280 | OGI:03090590 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr03:34859329-34867706 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGCGCTTCCCACTGCGCCGCCTCCTCATCCGCCGCGTCGAGCTCACGCCGCCGCCACGGCCATGCTGCCTTCGCACCACCACCTTCTCCACCACGGCCGCCGCCGCCTCCCCCGACCGCCGCCTCCTCGCCGTGCTCCGCGGCTGCGTCTCCCCGTCGCACCTCTCGCTCGGACTGCAGGTGCACGGGCGCGCCGTCACCGCGGGGCTCCACGCCACCGACACGGCGCTCCAGACCCGCCTCGTCGGCATGTACGTCCTCGCGCGCCGCTTCCGCGACGCCGTCGCGGTGTTCTCCTCGCTGCCACGGGGCGCCGCCGCTTGCGCGCTCCCGTGGAACTGGCTCATCCGCGGGCTCACCATGGCGGGGGACTACCGCTCCGCGCTCCTCTTCTACCTCAAGATGTGGGCGCACCCCTCCGCGCCGCTCCCGGACAGCCACACCTTCCCCTACGTCGTCAAGTCCTGCGCCGCGCTTGGCGCGATCGCTCTCGGCCGCCTCGTGCACCGCACCGCGCGGACGCTCGGGCTCGACGGCGACATGTTCGTCGGCAGCGCGCTGATCAAAATGTACGCCAATGGCGGCCTCCTCTGGGACGCGCGGCAGGTGTTCGACGGAATGGCGGAGCGGGATTGTGTCCTGTGGAATGTGATGATGGACGGGTATGTGAAAGCTGGGAGCGTGTCGAGCGCGGTGGAGCTATTCGGGGACATGAGAGCGAGCGGTTGCGAACCCAATTTCGCAACCTTGGCATGCTTTCTATCTGTTTCTGCCACAGAGAGTGACTTGTTCTTTGGGGTGCAGCTCCACACGCTTGCTGTGAAGTATGGGTTAGAATCTGAGGTGGCGGTGGCGAACACACTGGTGTCTATGTATGCCAAATGCAAATGCCTGGATGATGGCTGGAAGTTGTTTGGCCTGATGCCGCGTGATGACTTGGTGACCTGGAACGGGATGATATCCGGATGTGTGCAAAATGGTTTTGTTGATCAGGCATTGCTTTTGTTTTGTGATATGCAGAAGAGTGGTATTCGACCGGATTCAGTTACACTGGTGAGCTTGCTACCAGCTTTGACTGACTTGAATGGTTTCAATCAGGGGAAGGAGCTTCATGGTTATATTGTCAGAAACTGTGTGCACATGGATGTATTCTTGGTTAGTGCTTTGGTGGATATCTATTTCAAGTGCAGAGCAGTGAGGATGGCACAAAGTGTCTATGATTCTTCTAAAGCCATTGATGTGGTTATCGGCAGCACTATGATTTCTGGTTATGTTCTAAATGGGATGAGTCAAGAGGCAGTGAAAATGTTCCGATATTTGTTGGAACAAGGCATCAGACCAAATGCTGTAGCGATTGCTAGTGTGTTGCCGGCCTGTGCTAGCATGGCAGCTATGAAGCTTGGTCAGGAACTCCATAGTTATGCTCTGAAAAATGCATATGAAGGAAGGTGTTATGTGGAGAGTGCACTAATGGACATGTATGCTAAATGTGGCAGGCTTGACCTGAGCCATTATATTTTCTCTAAGATATCTGCTAAGGACGAAGTGACATGGAACTCAATGATTTCAAGCTTTGCACAAAATGGGGAACCAGAAGAAGCCCTTAACCTTTTCCGTGAAATGTGTATGGAAGGAGTAAAGTACAGTAATGTGACCATATCTTCTGTGCTATCAGCTTGTGCAAGCTTACCAGCTATATATTACGGAAAGGAGATTCATGGTGTCGTCATAAAGGGCCCCATAAGAGCAGACTTGTTTGCTGAGAGTGCTCTTATAGATATGTATGGCAAATGTGGTAACTTAGAATGGGCTCATCGTGTTTTTGAGTCCATGCCTGAGAAAAATGAAGTCTCATGGAATAGCATAATTGCTTCCTATGGGGCTTATGGCCTTGTTAAGGAGTCAGTAAGTTTATTACGCCATATGCAAGAGGAGGGATTCAAGGCAGATCATGTAACGTTCCTCGCTTTGGTTTCTGCTTGTGCTCATGCTGGACAAGTTCAGGAAGGATTGCGACTTTTCCGATGTATGACCGAGGAATATCAGATTGCACCTCGAATGGAGCATTTTGCTTGCATGGTTGACCTATATAGTCGGGCAGGGAAGTTGGATAAAGCTATGGAATTGATTGTTGATATGCCTTTCAAGCCAGATGCTGGTATTTGGGGTGCTCTTCTCCATGCTTGCCGTGTGCATCGCAATGTCGAACTTGCAGAGATTGCTTCACAGGAATTATTTAAGTTGGATCCTCATAATTCTGGTTATTATGTGCTCATGTCCAATATCAATGCAGTTGCTGGACGATGGGATGGTGTATCAAAAGTGAGAAGGTTAATGAAGGATACGAAAGTCCAAAAGATACCTGGTTACAGCTGGGTAGATGTAAATAACACCAGCCATTTATTTGTTGCAGCAGATAAAAGCCACCCTGATTCTGAAGATATTTACATGTCCTTGAAGAGTATTCTTCTAGAATTAAGAGAGGAAGGTTACATTCCCATGCCAGATTTATGTTGTCCCACGCACCTGGACAGCAGCACACAGGTTCAGCAACAATAACTCTGCAACTTGTTTGATTGTGCACTTTCATACTTCAAACCTTTTGAACTGCTGTGTCAATAATGTCTAAACATGTTCTGAAGATACTATGTTATGGATCTACATACTAACTAGCCTCTGTTGAAAAGCCATCACTGCTCTGCTAGCATCATTGTAGTACCAGATTGTCTATCCATTAATAGCATGCAACATCAGAATGTAGGGTCACTTGGGCAATTGAAGTTTAGGTAACCTGTCACAGATCGTCTCTGTGTTCAGTGAACAGAACAATGGCATATCATGACTTACCTTAACATTCTTTGCAGATTGGCTAAATCAGAATGGCATTCTTGAATCTCGACAAATATATGATGCCCCTATGCTATTGTGCATTTTCTGTCAAGGAATTATCAAAAGCTATTTCTATCTGATTCAGTAATGTCGTAACATTGCCTGGTTCAGGAATTCATTTATTTTGTTGTTTCTTATGTGTGCGTTAATGAAAAGTTTGGTAAGAGTTGCCAGTCTAGAGTTAAGATTTTACTGCTAATGTCTTTATCTTCTTGCAGGTCATGGGGATTTGATTGCGATGTTGTCCAACACTGCAAGCTGATCTTCTGCTGATGATTAATTGAGAACCATTATATCATTATCATACAAACTTTTGTTTGTGACCAAATGATCTTCTTATGCAGCTTATTCAATATCTTCATCTGAAAAAGTGGTGGGTTGACTTACATTGCTCGTACATTAATTGCTTCAAGAGTGTAGGGTTCATCTAACTGACTAAGTAACTATGTCAATCAACCTTCTCCTTGTTGTTCAGGGCTGTTCATATCATGACAATTAAAATCTTCTGCGTTTCAACCTTCTCCTTGTTGTTCAGGAGGGTTCATATAATACCAAATTTAAAATCTTCTGCATGATTCAAATGTTTTTTGTGTACCAACATGGTTAGCCTTATTCTCTTACGGTACTCAATCTGCCAATCATGAGAATTTCAGTTTTGCTGGTTTAGTGTATGTGCCTTTCAATCTTTCAATTTTTTACAGTAACTGAGCAGTGAACTGTGCCAAACTAGATCTGAGAAATATCTATATGATACCTAGAATCAGTACAAAATCCAAAATAAGTGCAGCTACACCTAGGCTTGGTTGAATTTATAGAAGCTTCTTGATGTGAGCCCCTTAATGATTTCTGTAGGTGTTATCCTGCATAAATAAATCCAGAAGCATATTGCCTTGTCTTATTTGTGAAAAGTTGTTCCATTTTGCCACTGGCGTGAGTTTTTTTTTTCATGACATTTCTTGGTTAAATTATGTGTGTTCTTGTTCCATCAAGGCCCTACTATCCAACCTTTATCTCGTGTGTAATCTAAGTGAACATCAGGCTGCAGGATGAGAGGGTCATGAAAACAACATCGGCGTCAAAGCTTGGCAAGTTAATGCACCATCGTTTCCTAGAAAGTATTTCATTGAATAAGGCTTGAGTTGTATTATATGGTGCTAATAATAATTTGGAACTTTCACATCAATGAAGTCCAGCTTTTGAACTGATCAAAAGGTAATTTTATCGGTTTTACCCATATCAATCGTACAATTTAGCATGATAGTTAGTTATATGTGTTGGTTTATGTTACAGGGCTTTGCACATGAACAGAGGGCTCCTTGATTGCTAACTTGGAGATATCTAGTAAGTTTGCTCAGATTTTGAAAAGGAAATATTCGTCAGTTAATGATATAAATCAAAAGATCCTTATGTTGACTTTATTATTATATAGGATCCTGTATTCATGAAAAACATGGTACTATATTATATTATATATACAAGAGATTTCTGTATTTCTGTTGTTTCTGAATAGTAACCTCACAATGGTTGATTTCAAGGCCATGTTTTTCCCCCTTGCATAGCTGTCACTTGGTACCAATGTTTCATAAACATTTCATGTAAAGAGCAACAGTACTTGAAGTACATACATATGAAGTTGGCCGATGTTCTGATCCATAATCTGGATCATAACAATAGCATCACAAACTCAAGTTAAGAATAGTACAGGGTCACTTTATACTACACAAACCGTCACGTTTCTTTTGATTCATGTATTCCTGTTTAAGAGACTTTTAACTCATATGTCGTCGTCCAAAATTTTCAGATCTTTTGGAAGCTTCTCACGCTGTATGCGTGCAAGGCTCTGAGGATTTCTGATTGCATCCAGCATCCTGTCCAAGAATTCAATGAACTGGCGATCTTCATGAGCAACCTGAGGATCTGAAAACCTATCGAAGCGATACTGATCCTGCACGTTCCATTACAACCATAAAGCTTCAAAAAACAGAGGAACTCCAGCACTAAGCAATAGATACATCGTGGGGATATCATATACTACATAAGTACGTCTTAAATCACAGGTATGTGCAAACAGAAGGTCAGTAAACTTGTAGATATATATTTACCTCAAGTTTAGTTTTATGATGATTATGATTACTAGTTTACCACAATCTTGGAATTTATTTGACACTGTACATGAAAAGCTGAACAACAACACATCTACTTGTCTAAGCACAAACCTTTTATTTAAACGGAATAACCAAACCACAAACATTCAACTTCGATGTAGAAAAAAAAAAAGGCAAATTTTGGATAGAGGTCGAACCTTGATCGTCGTGTCGACTTGCCCACACGCGCTGCTGCAGAAGGATTGATAGCTCGCCGGAGAAAGACGACGGAGCCCCTCCCCATGGAACAGCTGCAGCTGGCGATGGCCGGAGAGGCGGCAGATCGCCTGAATTCTCCCGAGGACCAACTCCGATGCCATGTTTGCCCAAGCAAGCGGTTATCCTTTGTTCCCCTCTTCTAATTTTCCCCTACTTCAATCTACAAGCTTCTCCAGGGATCGAGCAGTAGTTGTAGTTGTAGTACTATCGGAGTATTACGCAAGGTATCGGCAGTCATGGAAAGCTTCGTTGGCCTCGTTTGGACCGGCCGGGTCAGAGATTGACTGAGATTAGCAGTCATCCTTTGACGGAACGTTCTTTGGTCTCGTCACTGATGACTAGATAATCGCAAGTCACAACGTGTCTCCTGATCTCATCTTTGATTTCTCCTCCTGTAGCTATCTTGTTGATTACTACTAGGTTTGTCTCCGCACACCTGGGATGCTCCCAGTTTAGTTATTATCCCTCTCAGGCTCTGCCACGTAGAGCAGAATTACCATGGCTGTAGACCCCAAGGCGCCGTTTGGGCGCGTAACTGAATTTTTTAGAGATGTTTCGTTACGATCCTTGATTGCCAATTTGGCTGGAAAGATATGGCATCTGTAGCAATAATTTTGATCGAGAAAACGTGTACGCGTTTCAGCGGAAGCCTGGAAAGATGCTTCGAGAAGAATATTTTGCCAATTGGTCATACATATTACATGGTCGCTGGCCAACTTTCTTTTATGACTCGGCTCAAACTTTTAATCCATGGTCTCTGAAAACTTAATATAGACGTGATTCACAAAAAAAAAAACAGAAAAATTCACACGATTCTTCACAGTAACTGTAGATCTCGGGTTGTAAAATTCTCCGGTCGTGTGGTGGTTGTCATAAACCGAACGACAACAATGTCGTATGGTGAAAAAAAATACTGCCACACGATTAACTCACTGGCATTTTTCAGCCTATCTGCAATAGATTCTTCTGTAAAACTTGGTGAATTTGTATTTTCGGTGCTATGGTATCACCGATGACTTCTCATCCAAGACCTGCACTTCCCCGTTCAATGCAACTACGACATATGATCTGCAGATAAGGATTGCAATGTCTTAGAATATGTAGAGCACTGCATAGCTGCATTACTGTGCACTCAAGTAGTAAGTGTAGCATTGATAGAAATCTTGGGCATCAATGATTACTAAATATCATAAAGGAAAGGCTGCTTCTCCTAGGTCTAACTATCTATATCTTTGAAACACCTTGGTCTAGTACTAGATTAAACTATATATAGTCATGTTAGTTTGAGAAATTTACGGAATGCTGGAAACTATCCCATGGTCCACGACACCGGCAATTTTCTCCAAGCTTTCTGCTACCTTACCTGTAACCGAAACAAGTCAAACCAGCTAAAAATCAATCGAAGAAATGGTCACTAAATCATCGAGTTAACTTAGCATACCAAGATCCGGGATGGGAGTTGTGAAGATAACATCAAGTACATGATGGCCCTCCTTGGTAACCAATGGGAAGTCACCTCCTAATGGACCAGCGGTTCCAATCGATGGCCGCCTCCATACCTTCATCAGGTTATCATGTAACGATGACCAATGATGGAAAGTACTCAGATTCACATCACCACAAATCCAGTAGTTGCTCAGACTTCAGAGTAAACATTAGAATTACATAATAAATATATGAGTGCACCTCTGCGTCTCCTAGGAACAAGTCATCAATCTCTTCAGCAGTGTCGATCCAATTTGCCTGAAATGACCCGTTCTTCTATTAATGATGATTATTGCAATTGCAGAAAACTGATCACTCCAGTACCAGAAGGTGGCTTACACTTTTCACCAAGACTGGAATTGAACCTTCGATGCCTTTCACATATTTTTCATGGCCAATGATGAAGGCAAGTTTATCAGCTGATTTAACAATACCCTATGGAGGCATTTTCACATGACAATGTGGAAAAGAAGAGAACAGATTACACCAAGGTTGTCTCGATGAGCAACTAAATGAATCTCATTTCTGATGAGCTTTTTGAATACCTTCTCCACCATGAAAGAAGGCTCTCCGCTCTCCGTTTTCCGACGGCCAATGACAGCGGTCATTGTGTCCTCTTCAATTATATCAGCATCAGTGAAAGCAAAGTCAATCTATATGTCAGTAAACACCGTTTCAGCAGTTCACCCACTTTCTCCCATTGTCAGCAAGATTTACAATGGTGAAAGAAATCAACATACTTGGGTGCCTTCCTCGTAGCTGCTGACCTGTATCCCTGCTTTCACTGCCTCACTTGCACTGATCGTGGACCTGGCTGATCAACCCCAAGAATGGATTAGATGCAACTGACAAAGCATGTCATCCAAGGAAATTCAGGTCAGGAGCTCATGCGTCCACTCTTGAAACAATGAGTGATCCAAAAAGAAGTTAGCTTCAGCAACCAGAACTTACGAGGGTATTCCAAGGATGCCAGTGAGAGACCCTCGCCGGAGGCGAGTGCCGAGGTACTGGATGGCGAGGCCGGACGCCGGGCCGGAGCCGAGCCCGACCACCATGCCGCTCTCCACAAACCTGTCCACCTGAGGCCAGGCCAGGCCAGCCACCGAGCTCGTCAGAATAATATACACATGATCCAAGCGTCAACGAGCTGATGGAACAGTGGAGAATCCCCTCACCGTGAGCTTGGCGGCGTCGGCGTCCGCGGCGGCCGCGCAGGTCACAGCACGTCTCCGGCTACGGCGGCGCACGGTGGCCGGTGCGACGTTGCCGATGCGGCGGGGGCGTGGGCACGGGCGGAGCCGCGCCGAAGAGGAGCTCACGCTTGCCCCGGCAACGGCGTCCATGGTTGGGCTGGTGCCTCAGCTTGCTGGCCTAGCGAGCTTGACAGTTGCATACATTGGATGGATGGCACATTGACGAAGCGGATAAGGGGTGCGAAGCAGGTGCAACACCAGCCTATTGTCCTTGTTCTCCTCAGGCCTCATATGCTCGGTTGTGGAGTCACCGATAGCTCTTTGCGGTATAAATACGTTCACTAATCGATTTGTACTCAATTTACATATTCATATGTTTTATACAATGGTAGTTTGTACTCAATTCACATATTCATATGCTTATACAATGGTAGGCTAGCATTTGAAT
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| CDS seq | ATGCGCTTCCCACTGCGCCGCCTCCTCATCCGCCGCGTCGAGCTCACGCCGCCGCCACGGCCATGCTGCCTTCGCACCACCACCTTCTCCACCACGGCCGCCGCCGCCTCCCCCGACCGCCGCCTCCTCGCCGTGCTCCGCGGCTGCGTCTCCCCGTCGCACCTCTCGCTCGGACTGCAGGTGCACGGGCGCGCCGTCACCGCGGGGCTCCACGCCACCGACACGGCGCTCCAGACCCGCCTCGTCGGCATGTACGTCCTCGCGCGCCGCTTCCGCGACGCCGTCGCGGTGTTCTCCTCGCTGCCACGGGGCGCCGCCGCTTGCGCGCTCCCGTGGAACTGGCTCATCCGCGGGCTCACCATGGCGGGGGACTACCGCTCCGCGCTCCTCTTCTACCTCAAGATGTGGGCGCACCCCTCCGCGCCGCTCCCGGACAGCCACACCTTCCCCTACGTCGTCAAGTCCTGCGCCGCGCTTGGCGCGATCGCTCTCGGCCGCCTCGTGCACCGCACCGCGCGGACGCTCGGGCTCGACGGCGACATGTTCGTCGGCAGCGCGCTGATCAAAATGTACGCCAATGGCGGCCTCCTCTGGGACGCGCGGCAGGTGTTCGACGGAATGGCGGAGCGGGATTGTGTCCTGTGGAATGTGATGATGGACGGGTATGTGAAAGCTGGGAGCGTGTCGAGCGCGGTGGAGCTATTCGGGGACATGAGAGCGAGCGGTTGCGAACCCAATTTCGCAACCTTGGCATGCTTTCTATCTGTTTCTGCCACAGAGAGTGACTTGTTCTTTGGGGTGCAGCTCCACACGCTTGCTGTGAAGTATGGGTTAGAATCTGAGGTGGCGGTGGCGAACACACTGGTGTCTATGTATGCCAAATGCAAATGCCTGGATGATGGCTGGAAGTTGTTTGGCCTGATGCCGCGTGATGACTTGGTGACCTGGAACGGGATGATATCCGGATGTGTGCAAAATGGTTTTGTTGATCAGGCATTGCTTTTGTTTTGTGATATGCAGAAGAGTGGTATTCGACCGGATTCAGTTACACTGGTGAGCTTGCTACCAGCTTTGACTGACTTGAATGGTTTCAATCAGGGGAAGGAGCTTCATGGTTATATTGTCAGAAACTGTGTGCACATGGATGTATTCTTGGTTAGTGCTTTGGTGGATATCTATTTCAAGTGCAGAGCAGTGAGGATGGCACAAAGTGTCTATGATTCTTCTAAAGCCATTGATGTGGTTATCGGCAGCACTATGATTTCTGGTTATGTTCTAAATGGGATGAGTCAAGAGGCAGTGAAAATGTTCCGATATTTGTTGGAACAAGGCATCAGACCAAATGCTGTAGCGATTGCTAGTGTGTTGCCGGCCTGTGCTAGCATGGCAGCTATGAAGCTTGGTCAGGAACTCCATAGTTATGCTCTGAAAAATGCATATGAAGGAAGGTGTTATGTGGAGAGTGCACTAATGGACATGTATGCTAAATGTGGCAGGCTTGACCTGAGCCATTATATTTTCTCTAAGATATCTGCTAAGGACGAAGTGACATGGAACTCAATGATTTCAAGCTTTGCACAAAATGGGGAACCAGAAGAAGCCCTTAACCTTTTCCGTGAAATGTGTATGGAAGGAGTAAAGTACAGTAATGTGACCATATCTTCTGTGCTATCAGCTTGTGCAAGCTTACCAGCTATATATTACGGAAAGGAGATTCATGGTGTCGTCATAAAGGGCCCCATAAGAGCAGACTTGTTTGCTGAGAGTGCTCTTATAGATATGTATGGCAAATGTGGTAACTTAGAATGGGCTCATCGTGTTTTTGAGTCCATGCCTGAGAAAAATGAAGTCTCATGGAATAGCATAATTGCTTCCTATGGGGCTTATGGCCTTGTTAAGGAGTCAGTAAGTTTATTACGCCATATGCAAGAGGAGGGATTCAAGGCAGATCATGTAACGTTCCTCGCTTTGGTTTCTGCTTGTGCTCATGCTGGACAAGTTCAGGAAGGATTGCGACTTTTCCGATGTATGACCGAGGAATATCAGATTGCACCTCGAATGGAGCATTTTGCTTGCATGGTTGACCTATATAGTCGGGCAGGGAAGTTGGATAAAGCTATGGAATTGATTGTTGATATGCCTTTCAAGCCAGATGCTGGTATTTGGGGTGCTCTTCTCCATGCTTGCCGTGTGCATCGCAATGTCGAACTTGCAGAGATTGCTTCACAGGAATTATTTAAGTTGGATCCTCATAATTCTGGTTATTATGTGCTCATGTCCAATATCAATGCAGTTGCTGGACGATGGGATGGTGTATCAAAAGTGAGAAGGTTAATGAAGGATACGAAAGTCCAAAAGATACCTGGTTACAGCTGGGTAGATGTAAATAACACCAGCCATTTATTTGTTGCAGCAGATAAAAGCCACCCTGATTCTGAAGATATTTACATGTCCTTGAAGAGTATTCTTCTAGAATTAAGAGAGGAAGGTCATGGGGATTTGATTGCGATGGCTTTGCACATGAACAGAGGGCTCCTTGATTGCTAA
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| Protein seq | MRFPLRRLLIRRVELTPPPRPCCLRTTTFSTTAAAASPDRRLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEGHGDLIAMALHMNRGLLDC |
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| Function | Pentatricopeptide repeat-containing protein At4g21300 [UniProtKB/Swiss-Prot:Q9STE1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_03g0036280 | OsIR64_03g0036280.01 | Chr03 | 34859329 | 34867706 | + | NAM | ||
| CDS seq | ATGCGCTTCCCACTGCGCCGCCTCCTCATCCGCCGCGTCGAGCTCACGCCGCCGCCACGGCCATGCTGCCTTCGCACCACCACCTTCTCCACCACGGCCGCCGCCGCCTCCCCCGACCGCCGCCTCCTCGCCGTGCTCCGCGGCTGCGTCTCCCCGTCGCACCTCTCGCTCGGACTGCAGGTGCACGGGCGCGCCGTCACCGCGGGGCTCCACGCCACCGACACGGCGCTCCAGACCCGCCTCGTCGGCATGTACGTCCTCGCGCGCCGCTTCCGCGACGCCGTCGCGGTGTTCTCCTCGCTGCCACGGGGCGCCGCCGCTTGCGCGCTCCCGTGGAACTGGCTCATCCGCGGGCTCACCATGGCGGGGGACTACCGCTCCGCGCTCCTCTTCTACCTCAAGATGTGGGCGCACCCCTCCGCGCCGCTCCCGGACAGCCACACCTTCCCCTACGTCGTCAAGTCCTGCGCCGCGCTTGGCGCGATCGCTCTCGGCCGCCTCGTGCACCGCACCGCGCGGACGCTCGGGCTCGACGGCGACATGTTCGTCGGCAGCGCGCTGATCAAAATGTACGCCAATGGCGGCCTCCTCTGGGACGCGCGGCAGGTGTTCGACGGAATGGCGGAGCGGGATTGTGTCCTGTGGAATGTGATGATGGACGGGTATGTGAAAGCTGGGAGCGTGTCGAGCGCGGTGGAGCTATTCGGGGACATGAGAGCGAGCGGTTGCGAACCCAATTTCGCAACCTTGGCATGCTTTCTATCTGTTTCTGCCACAGAGAGTGACTTGTTCTTTGGGGTGCAGCTCCACACGCTTGCTGTGAAGTATGGGTTAGAATCTGAGGTGGCGGTGGCGAACACACTGGTGTCTATGTATGCCAAATGCAAATGCCTGGATGATGGCTGGAAGTTGTTTGGCCTGATGCCGCGTGATGACTTGGTGACCTGGAACGGGATGATATCCGGATGTGTGCAAAATGGTTTTGTTGATCAGGCATTGCTTTTGTTTTGTGATATGCAGAAGAGTGGTATTCGACCGGATTCAGTTACACTGGTGAGCTTGCTACCAGCTTTGACTGACTTGAATGGTTTCAATCAGGGGAAGGAGCTTCATGGTTATATTGTCAGAAACTGTGTGCACATGGATGTATTCTTGGTTAGTGCTTTGGTGGATATCTATTTCAAGTGCAGAGCAGTGAGGATGGCACAAAGTGTCTATGATTCTTCTAAAGCCATTGATGTGGTTATCGGCAGCACTATGATTTCTGGTTATGTTCTAAATGGGATGAGTCAAGAGGCAGTGAAAATGTTCCGATATTTGTTGGAACAAGGCATCAGACCAAATGCTGTAGCGATTGCTAGTGTGTTGCCGGCCTGTGCTAGCATGGCAGCTATGAAGCTTGGTCAGGAACTCCATAGTTATGCTCTGAAAAATGCATATGAAGGAAGGTGTTATGTGGAGAGTGCACTAATGGACATGTATGCTAAATGTGGCAGGCTTGACCTGAGCCATTATATTTTCTCTAAGATATCTGCTAAGGACGAAGTGACATGGAACTCAATGATTTCAAGCTTTGCACAAAATGGGGAACCAGAAGAAGCCCTTAACCTTTTCCGTGAAATGTGTATGGAAGGAGTAAAGTACAGTAATGTGACCATATCTTCTGTGCTATCAGCTTGTGCAAGCTTACCAGCTATATATTACGGAAAGGAGATTCATGGTGTCGTCATAAAGGGCCCCATAAGAGCAGACTTGTTTGCTGAGAGTGCTCTTATAGATATGTATGGCAAATGTGGTAACTTAGAATGGGCTCATCGTGTTTTTGAGTCCATGCCTGAGAAAAATGAAGTCTCATGGAATAGCATAATTGCTTCCTATGGGGCTTATGGCCTTGTTAAGGAGTCAGTAAGTTTATTACGCCATATGCAAGAGGAGGGATTCAAGGCAGATCATGTAACGTTCCTCGCTTTGGTTTCTGCTTGTGCTCATGCTGGACAAGTTCAGGAAGGATTGCGACTTTTCCGATGTATGACCGAGGAATATCAGATTGCACCTCGAATGGAGCATTTTGCTTGCATGGTTGACCTATATAGTCGGGCAGGGAAGTTGGATAAAGCTATGGAATTGATTGTTGATATGCCTTTCAAGCCAGATGCTGGTATTTGGGGTGCTCTTCTCCATGCTTGCCGTGTGCATCGCAATGTCGAACTTGCAGAGATTGCTTCACAGGAATTATTTAAGTTGGATCCTCATAATTCTGGTTATTATGTGCTCATGTCCAATATCAATGCAGTTGCTGGACGATGGGATGGTGTATCAAAAGTGAGAAGGTTAATGAAGGATACGAAAGTCCAAAAGATACCTGGTTACAGCTGGGTAGATGTAAATAACACCAGCCATTTATTTGTTGCAGCAGATAAAAGCCACCCTGATTCTGAAGATATTTACATGTCCTTGAAGAGTATTCTTCTAGAATTAAGAGAGGAAGGTCATGGGGATTTGATTGCGATGGCTTTGCACATGAACAGAGGGCTCCTTGATTGCTAA
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| Protein seq | MRFPLRRLLIRRVELTPPPRPCCLRTTTFSTTAAAASPDRRLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEGHGDLIAMALHMNRGLLDC
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.150168 | 0.000000 | 0.124552 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0781100 | RBH | 0.783238 | 0.203723 | 0.606912 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g56850 | RBH | 0.514833 | 0.124679 | 0.145516 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0781100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0036950 | RBH | 0.090702 | 0.626438 | 0.453694 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0036640 | RBH | 0.136827 | 0.000000 | 0.342727 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0036700 | RBH | 0.572257 | 1.064435 | 2.298812 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0036990 | RBH | 0.126709 | 0.044299 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0036480 | RBH | 2.076388 | 1.839494 | 1.838461 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0552300 | RBH | 0.9969375 | 3.4152915 | 0.7234285 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0553100 | RBH | 2.3424475 | 4.3249805 | 4.7785255 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0036770 | RBH | 0.000000 | 0.030446 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0036780 | RBH | 0.113047 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0036420 | RBH | 0.000000 | 2.984025 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0036510 | RBH | 0.352952 | 0.228940 | 0.055010 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0036470 | RBH | 0.099072 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G036280 | RBH | 0.061065 | 0.000000 | 0.138665 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0036070 | RBH | 0.371433 | 1.191819 | 0.920182 |
